Os04g0663100
| Gene Name |
Os04g0663100 |
|---|---|
| Description |
PHF5-like family protein |
| Version |
NM_001060696.1 GI:115461121 GeneID:4337301 |
| Length |
5890 bp |
| Definition |
Oryza sativa Japonica Group Os04g0663100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:34238550..34244439 |
| Sequence Coding Region |
34238712..34238816,34240284..34240997,34241084..34241254,34241691..34241747,34241832..34243446 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:34238550..34244439 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:34238550..34244439 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgacgaagcccaagaacggctgcctcaagatcctcgcctgcgccggcggcggatccgacccgtccgccggctccgacggcgacgcggatgaccacgtcgacgagaacaaggccatatcagataaaagtaggtggagctttcgtaggaggtctacaaggcatcgtgttttgaagaattctgatatatctgaacctgaaactcttagttcgagcaaagcaaaagctgaaattgctccaagcaacatctattcttcaacttactcctatgcctcagaaaaacctctacagcaagagaaaccagatgagaaaattctgcagcaagagaaatcagatgagaaaattctgcagcaagacgaaccagctgagaaaattctgcagcaagagaaaccggacgagaaaattttgcagcaagataaaccagatgaggggcctttgaatgaagagatgcctgatgaaaaactgatagagaagccaattgatcagccaggtgatgaatcaattgaaaagccagctgatgaaccaattgaaaagtcagctgaccagataactgaaaggtcaattgagcagccagctgaaagagtaactgaagtgccaatccaagaaccaactgaaagggtaactgaaactccaatagtaaagccaaatgataatgatgttgaggaacacactgataagacggatgaaagtatttttgtttcatcaactgaggtgaagcaggaggaaaccgtctctctctttgatggaagcagtgaagaccatcaggaagattgtgcggagactgctgctgctgtcattcagtctggcatcagagtgcacactgaagagcaagaactaccaaatgataaggaccttgtgaaactgcaagctgtgatacgtgggcatcttgttaggaggcaggctgcagaatcattacaatgcttgcttgctattgttaaaatgcaaggacttgtccgggttcatcaagcacagcaatatggaggaaagtttcaggactctttgatctgttcttcaagtgagaaattactcaataatggatttgctctgaagctcatggacagcatgtcgacttcaaaatccattcacataaaatgtgatccttctgaacctgatgttgcatggaaatggatggagagatggacatccatgattccaccaaacactgggggacacttgctagaggatagagagaataacgagtcggtggatgagaaaataaaaggagatgctcaacatgaggaaaatacccttcctttggattctgacatctctttcctgaagttggtgcctgatgatgcggaagagacactaaggccatctgattctcatcccctggaggtttctgcatgcattccagatagaacttctggaatggaaattgaagatgttcctgaaccagatttgattgaaaagttcaaggaagatgttgaaaaattgactgaaccggagactgagaatgttgcggaacaacctttggaggtctcagttgaacaatctactcaaactgatacatcaagggaacccattcctcttcctgaaaaacctgaatcttcctttgatgatactatggatgcatataaaactgagcagacttcggagatggaaggtaaaaagtttatggctagaaagtcatgcaatcctgcatttgctgctgcacagttaaaatttgaagagttgacttccaatttgacggtcagtaggtccaacagtctggatggggcaaacaaaccaaaggtacatactcctcgttcacaagacaatgtctcacccaagcaaagtaatgacacaagcataccagagagctcagtggggcatgatcctaaaatcgtagttcctgcttcagaatgtggaactgagatatcaatctcctctacacttgactcaccggatagatcagaagctgatggtggcgagattgtactggagattggatccctggaagataggaaccatgttggtgataatgctgaaaaggataacagtgttttgcattctgaagtgaacacttctggaggagctatcgagccagaaaaggaagtacaaactgatgacactgctatcgctgccaatgcaattgatcctgtgcctgttgaacaaccacatctgggacaggaaaagcctgatttacatgatgaactggaaaaatctgtaggatcttatgtgaagacacctgaaggtactcccttgagccgaactacctttgctgaatctcatgggacaccatcaagtgaggtctctgttaacaccaaaaaaagcaagagcaaaaggcccaagtctcatgtaagcaagagatcactaactagtccaagcagcgattctgtgggacggagcagcatggataatctgtcaaaggattacagacttgggaggcgagagagctcaggcaaggttaaatctgatcatgttgatcaagaacctcgcataagcaacagcactccattgccaagttatatgcagtttacagaatctgcaagggcaaaggcatctgctagtgtatcaccaaagttaagcccggatgtgcaagacaacaatccaaggaaaaggcactctttgcccatgactaacggtaagcaagattcatctcctcgcatgcaacgatcatcatcccaagctcagcagaatgtgaaaagcaatggtgctgttcctgttcctcccaattcatctgataggagatggcatatatga</cdnaseq> |
| Protein Sequence |
<aaseq>MTKPKNGCLKILACAGGGSDPSAGSDGDADDHVDENKAISDKSR WSFRRRSTRHRVLKNSDISEPETLSSSKAKAEIAPSNIYSSTYSYASEKPLQQEKPDE KILQQEKSDEKILQQDEPAEKILQQEKPDEKILQQDKPDEGPLNEEMPDEKLIEKPID QPGDESIEKPADEPIEKSADQITERSIEQPAERVTEVPIQEPTERVTETPIVKPNDND VEEHTDKTDESIFVSSTEVKQEETVSLFDGSSEDHQEDCAETAAAVIQSGIRVHTEEQ ELPNDKDLVKLQAVIRGHLVRRQAAESLQCLLAIVKMQGLVRVHQAQQYGGKFQDSLI CSSSEKLLNNGFALKLMDSMSTSKSIHIKCDPSEPDVAWKWMERWTSMIPPNTGGHLL EDRENNESVDEKIKGDAQHEENTLPLDSDISFLKLVPDDAEETLRPSDSHPLEVSACI PDRTSGMEIEDVPEPDLIEKFKEDVEKLTEPETENVAEQPLEVSVEQSTQTDTSREPI PLPEKPESSFDDTMDAYKTEQTSEMEGKKFMARKSCNPAFAAAQLKFEELTSNLTVSR SNSLDGANKPKVHTPRSQDNVSPKQSNDTSIPESSVGHDPKIVVPASECGTEISISST LDSPDRSEADGGEIVLEIGSLEDRNHVGDNAEKDNSVLHSEVNTSGGAIEPEKEVQTD DTAIAANAIDPVPVEQPHLGQEKPDLHDELEKSVGSYVKTPEGTPLSRTTFAESHGTP SSEVSVNTKKSKSKRPKSHVSKRSLTSPSSDSVGRSSMDNLSKDYRLGRRESSGKVKS DHVDQEPRISNSTPLPSYMQFTESARAKASASVSPKLSPDVQDNNPRKRHSLPMTNGK QDSSPRMQRSSSQAQQNVKSNGAVPVPPNSSDRRWHI</aaseq> |
| Gene Sequence |
<dnaseqindica>163..267#1735..2448#2535..2705#3142..3198#3283..4897#5549..5568#agctaaacgcaaagcaaaaccaacgcaaagccagagaagaaacaagtcagaggaacgcagctccctatcctgttccgctccagacgcacgcacgcacgcgctgcactgactgaggccgacgcggcggcggcggcggcagcggcggcggcgaaagcgagcccgatgacgaagcccaagaacggctgcctcaagatcctcgcctgcgccggcggcggatccgacccgtccgccggctccgacggcgacgcggatgaccacgtcgacgaggtactcgcgcgccgcacctccgcttgaatgcgccgccgcgccggccttgctcgccgaagccgtttttttttgttcttttgggggggttctctcgagctggtgcgtttgttttcagcagatctcagtgggatgcgtggggtcgaggtgcgggcgcgtgttgttttagttagatctggggttgattcgtggcggcgagcaagacgcagccagcaaaatgagagcttttttttttttttggctggtgatcccgtgctgttcccgcacgtcctatgagttcattcaaaggctcaattttgatttcaatttccttccttttttttaccccttctcttctgttgctgcatggctctagctgcagcagctggaatattatggctgctactcttgccgccctgagtccatgcaagatgtcaggaagggatctggtgtttatctgctgctcaaagtgctactcactgtgtatggtgtctctcgtcttgttgcatgattggcatctgtcattctcttcctcggagctgagtgttgctagccttgtcccccatgatttgacactttggttgtaatgttgcgctgttgattactgtttttccctaccaagaatctcagtgtggggaggagttcactggactctggagcagctcatttttcactaattggctggacgctcatcgtataaaatctctatgttgaatcgagaaaaatcctctaatcgtaggagacagccgcaccatagtgttggtgaaatgggatctggaattttcacgggacagcctagaggatctgtaccaactatagtgagtgactgagagtagttagctctttttgatgttcagggaaaagagagagtagttagctctctttcattgatataattgcaaaaggacaaattttttcttgctggatcagtggtgatagctgacagcaaaccaaatgtatttttgctaggattctatgcctccacctgcaattattagaagttggcaaattaaaaatactcctgattaagtagtgcataatttcaccaaggtattacctgaatcatgttagcttacctccttttatagtttatttactgaactggtatttttggaaataaattgattattgagggagatatcacgccagtaaggcattaacaaactttgggtctttttttgcgaggaaaactttggggagatttattaggaactggtacagtaatttcaaaactaatagagtttatctgccacttcctttcttttgtgttgtttcccttcctggtcaacgacattttgcttcattaaatgagaagtatgttggttgcctacatttcagatacacgaaactagccctcattacctgcattttgcttgtaacatctcttctagttcgtctcgggtgaaaaagctaccacagaatatctgtcttctcttccttatatcaagtagatgaatcatgctaatggctgttaaatgttggcttttacagaacaaggccatatcagataaaagtaggtggagctttcgtaggaggtctacaaggcatcgtgttttgaagaattctgatatatctgaacctgaaactcttagttcgagcaaagcaaaagctgaaattgctccaagcaacatctattcttcaacttactcctatgcctcagaaaaacctctacagcaagagaaaccagatgagaaaattctgcagcaagagaaatcagatgagaaaattctgcagcaagacgaaccagctgagaaaattctgcagcaagagaaaccggacgagaaaattttgcagcaagataaaccagatgaggggcctttgaatgaagagatgcctgatgaaaaactgatagagaagccaattgatcagccaggtgatgaatcaattgaaaagccagctgatgaaccaattgaaaagtcagctgaccagataactgaaaggtcaattgagcagccagctgaaagagtaactgaagtgccaatccaagaaccaactgaaagggtaactgaaactccaatagtaaagccaaatgataatgatgttgaggaacacactgataagacggatgaaagtatttttgtttcatcaactgaggtgaagcaggaggaaaccgtctctctctttgatggaagcagtgaagaccatcaggaagattgtgcggagactgctgctgctgtcattcagtctggcatcagagtgcacactgtatgttgcagtatttcccactatttatatttattaattatttttctgttagtgttattacattattgtcatttacatgactataggaagagcaagaactaccaaatgataaggaccttgtgaaactgcaagctgtgatacgtgggcatcttgttaggaggcaggctgcagaatcattacaatgcttgcttgctattgttaaaatgcaaggacttgtccgggttcatcaagcacagcaatatggaggaaagtttcaggtattcaaggcactctcatttagacacgtatggtatcattgtatctagacagtataaactcttttgctgccagtcagttaagcttggtttaatattattcaatataagtttaatatgctatgtgaagtctatgatcttcttatccttccttcgccaagttccttcttctagtaacctgaaagctgtcaacctcttgttggcaattgatcttaaggtttagtatgtgcggaggcaatccactttagttgctacattgattggatatctcgcatctcgatgttgaattccatgcacgcacaatcattaattttggatcaaaaccttatctgctgcacttaacacgtatataattcttgtttctgtgtgacaatactgaatagtagccttgcttgaacattttgcttgtttgttcatgattttacatttctttttgcaggactctttgatctgttcttcaagtgagaaattactcaataatggatttgctctgaaggttagatgaaagaacccttattaactaagattatcatacgttagttcttggttggattttctcatgtttgttaccttctgtcagctcatggacagcatgtcgacttcaaaatccattcacataaaatgtgatccttctgaacctgatgttgcatggaaatggatggagagatggacatccatgattccaccaaacactgggggacacttgctagaggatagagagaataacgagtcggtggatgagaaaataaaaggagatgctcaacatgaggaaaatacccttcctttggattctgacatctctttcctgaagttggtgcctgatgatgcggaagagacactaaggccatctgattctcatcccctggaggtttctgcatgcattccagatagaacttctggaatggaaattgaagatgttcctgaaccagatttgattgaaaagttcaaggaagatgttgaaaaattgactgaaccggagactgagaatgttgcggaacaacctttggaggtctcagttgaacaatctactcaaactgatacatcaagggaacccattcctcttcctgaaaaacctgaatcttcctttgatgatactatggatgcatataaaactgagcagacttcggagatggaaggtaaaaagtttatggctagaaagtcatgcaatcctgcatttgctgctgcacagttaaaatttgaagagttgacttccaatttgacggtcagtaggtccaacagtctggatggggcaaacaaaccaaaggtacatactcctcgttcacaagacaatgtctcacccaagcaaagtaatgacacaagcataccagagagctcagtggggcatgatcctaaaatcgtagttcctgcttcagaatgtggaactgagatatcaatctcctctacacttgactcaccggatagatcagaagctgatggtggcgagattgtactggagattggatccctggaagataggaaccatgttggtgataatgctgaaaaggataacagtgttttgcattctgaagtgaacacttctggaggagctatcgagccagaaaaggaagtacaaactgatgacactgctatcgctgccaatgcaattgatcctgtgcctgttgaacaaccacatctgggacaggaaaagcctgatttacatgatgaactggaaaaatctgtaggatcttatgtgaagacacctgaaggtactcccttgagccgaactacctttgctgaatctcatgggacaccatcaagtgaggtctctgttaacaccaaaaaaagcaagagcaaaaggcccaagtctcatgtaagcaagagatcactaactagtccaagcagcgattctgtgggacggagcagcatggataatctgtcaaaggattacagacttgggaggcgagagagctcaggcaaggttaaatctgatcatgttgatcaagaacctcgcataagcaacagcactccattgccaagttatatgcagtttacagaatctgcaagggcaaaggcatctgctagtgtatcaccaaagttaagcccggatgtgcaagacaacaatccaaggaaaaggcactctttgcccatgactaacggtaagcaagattcatctcctcgcatgcaacgatcatcatcccaagctcagcagaatgtgaaaagcaatggtgctgttcctgttcctcccaattcatctggtaagtgactaagtgcgcacaagtctattcctttgctagttgctactatcatcctatgatcttagtatgatcagtttgcacttgaaagcttagtttacgaagatgatttgtaatgattacctgtttttctctggatcactgtagcaacaaatatcttgtagcctcgatatgcagtttaggtcattaaactctactctaatttgtgaggtccacttttgtgaagcacccacttgcatacacaagctatttcagggaactgcataacattaaaattaagatgaacatagaaatgtagtgtttgggcattaccggtaatccgccttccctgaacattcccagcgacctgtgatctcttcagtggtgcttttagtgtcgcctcagaacattttcgtcctttatatgtaatgttcattgttttcagtttattactggctatattactgataaatggtaatgcactaatccctgaatattatcatgtacttatatttgtactctcttcagtgtggttttgtgcttgctcagtatgatcatctaccagtgctgttgctatgtttgtgttaccatctattgaacagtatagaataatacgatagactgtatttccatccatgatgcacatatatctaaacaagaacttctggtttgcagataggagatggcatatatgatgagtgcgcctagcaagagtttttagcgaggtgccatagaagcatttgatgagatgactcagatttgtgcttgttttcccaccgcacaccaccatctaattcgtcagtttttttattctttgttggaatactcggtatggttggaacttgggagaagaacagcaacagctttcctataatgtacatttgttggttcttggtttgttgttatttgactggtaatgaatgaatgaatgatttgtgtgtgtaatatatcttgacttgtaatgcaacagcggtctgttatatttgccaatattgatgttcatgttggtgtggagtg</dnaseqindica> 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| External Link(s) |
