Os04g0664500

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Revision as of 11:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0664500| Description = Similar to Agmatine coumaroyltransferase| Version = NM_001060705.1 GI:115461139 GeneID:4337310| Length = 1678 bp| D...")
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Gene Name

Os04g0664500

Description

Similar to Agmatine coumaroyltransferase

Version

NM_001060705.1 GI:115461139 GeneID:4337310

Length

1678 bp

Definition

Oryza sativa Japonica Group Os04g0664500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:34323988..34325665

Sequence Coding Region

34324210..34325472

Expression

GEO Profiles:Os04g0664500

Genome Context

<gbrowseImage1> name=NC_008397:34323988..34325665 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:34323988..34325665 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cacgtacatctcggtgatatacgcctaccgcccaccggctccggccaacgccgccctcgaggcggggctcgccaaggcgctgatcgagtaccgcgagtgggcagggcgcctcggcgtggacggcgacggcaaccgcgccatcctgctcaacgacgggggcgcgcggttcgtcgaggcgacggccgacgtgacgctggacagcgtgatgccgctgaagccgacggcggaggtgctgagcctgcacccgagcggggcagactgaccgcgggtgggagcagtgatggcgtcagtcccagggtcaacagcaggtttcagcgtggcaggctcacctcagtgcgtggggcttgcaccaacagcaagcacaatcatggacaagacagnccgcgcacaaccaaacaacttcttgcctgcgcgtgggagccaggccacccgcggcgccgcattccacctgtgccccgtgcacgaccgcgtctccttcttcgcgccgcgcgacactcccaagtcgagttcgagcaccgtggcgtggagttcaagccgtacgacgacgacgaggatgtccatgcgtccgccgccgccggcgacgacgacgaggtggtgataaacaaggtgcacttgagccgggaattcatctcgaagctcaagtcgcaggcgtcggctggcgcgcaccggccgtacagcacgctgcagtgcgtggtggcgcacctgtggcgatgcatgacgaaggcacgcgggctcgacgggcgcgagtccaccagcgtgtgcatcgccgtcgacgggcgcgcgcggatgagcccgccggtgccggacggctacacgggcaatgtcgtgctctgggcgcggccaaccgcgacggccggtgagctggtgaccaggccgctgaagcacgccgtggagctcatcaaccgggaggtgatccggatcaacgacggctacttcaagtcgttcatcgacttcgccaactccggtgcggtggaggaggagcggctggtggcgtcggccgacgcggcggagatggtgctgagcccgaacatcgaggtggacagctggctgcggatcccgttctacgacctcgacttcggcggcgggcggccattcttcttcatgcccagctacctgccggtggaaggtttgctcatcctgctgccgtctttcttcggcgacgggagcgttgacgcgtacgtgccactcttcagccgcgacatggacgtcttcaagaactgctgctactcattcgacaaagaccaaactactagccttgcatga</cdnaseq>

Protein Sequence

<aaseq>HVHLGDIRLPPTGSGQRRPRGGARQGADRVPRVGRAPRRGRRRQ PRHPAQRRGRAVRRGDGRRDAGQRDAAEADGGGAEPAPERGRLTAGGSSDGVSPRVNS RFQRGRLTSVRGACTNSKHNHGQDXPRTTKQLLACAWEPGHPRRRIPPVPRARPRLLL RAARHSQVEFEHRGVEFKPYDDDEDVHASAAAGDDDEVVINKVHLSREFISKLKSQAS AGAHRPYSTLQCVVAHLWRCMTKARGLDGRESTSVCIAVDGRARMSPPVPDGYTGNVV LWARPTATAGELVTRPLKHAVELINREVIRINDGYFKSFIDFANSGAVEEERLVASAD AAEMVLSPNIEVDSWLRIPFYDLDFGGGRPFFFMPSYLPVEGLLILLPSFFGDGSVDA YVPLFSRDMDVFKNCCYSFDKDQTTSLA</aaseq>

Gene Sequence

<dnaseqindica>223..1485#atgcacacacgattgtacacttcgccggacacgtaccacgtcggcctaattaagcagtccaagaacgtatatactcaccacttcaccagcacatttgattctgcacatgaagatcaccgtgcactcatccaaggccgtcaagccggcatacggccccggcgagttccccaccaccaccggcgacgtcgtcccgctcaaagtgttcgacaaggcgaactttgacacgtacatctcggtgatatacgcctaccgcccaccggctccggccaacgccgccctcgaggcggggctcgccaaggcgctgatcgagtaccgcgagtgggcagggcgcctcggcgtggacggcgacggcaaccgcgccatcctgctcaacgacgggggcgcgcggttcgtcgaggcgacggccgacgtgacgctggacagcgtgatgccgctgaagccgacggcggaggtgctgagcctgcacccgagcggggcagactgaccgcgggtgggagcagtgatggcgtcagtcccagggtcaacagcaggtttcagcgtggcaggctcacctcagtgcgtggggcttgcaccaacagcaagcacaatcatggacaagacagnccgcgcacaaccaaacaacttcttgcctgcgcgtgggagccaggccacccgcggcgccgcattccacctgtgccccgtgcacgaccgcgtctccttcttcgcgccgcgcgacactcccaagtcgagttcgagcaccgtggcgtggagttcaagccgtacgacgacgacgaggatgtccatgcgtccgccgccgccggcgacgacgacgaggtggtgataaacaaggtgcacttgagccgggaattcatctcgaagctcaagtcgcaggcgtcggctggcgcgcaccggccgtacagcacgctgcagtgcgtggtggcgcacctgtggcgatgcatgacgaaggcacgcgggctcgacgggcgcgagtccaccagcgtgtgcatcgccgtcgacgggcgcgcgcggatgagcccgccggtgccggacggctacacgggcaatgtcgtgctctgggcgcggccaaccgcgacggccggtgagctggtgaccaggccgctgaagcacgccgtggagctcatcaaccgggaggtgatccggatcaacgacggctacttcaagtcgttcatcgacttcgccaactccggtgcggtggaggaggagcggctggtggcgtcggccgacgcggcggagatggtgctgagcccgaacatcgaggtggacagctggctgcggatcccgttctacgacctcgacttcggcggcgggcggccattcttcttcatgcccagctacctgccggtggaaggtttgctcatcctgctgccgtctttcttcggcgacgggagcgttgacgcgtacgtgccactcttcagccgcgacatggacgtcttcaagaactgctgctactcattcgacaaagaccaaactactagccttgcatgaactatattattgaaaaacaagacatgcagttaatgctagatcacttgattgagactagttagctaattagtatttgtttgatgttgttgattcaattattatgaattgaattaattacgcgagatgttctgccgatgaaagttgaattgaataaataaagttatctgtaaaaaaaaacttgaaatattgtagt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0664500, RefSeq:Os04g0664500