Os10g0142600

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Revision as of 08:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0142600| Description = Protein kinase-like domain containing protein| Version = NM_001070684.2 GI:297610091 GeneID:4348090| Length = 5209 b...")
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Gene Name

Os10g0142600

Description

Protein kinase-like domain containing protein

Version

NM_001070684.2 GI:297610091 GeneID:4348090

Length

5209 bp

Definition

Oryza sativa Japonica Group Os10g0142600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:2570422..2575630

Sequence Coding Region

2573356..2575308

Expression

GEO Profiles:Os10g0142600

Genome Context

<gbrowseImage1> name=NC_008403:2570422..2575630 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:2570422..2575630 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatctttcagaaagcaagcacaaagagtatattgaaagggcacaatggatagaggagaacatttctaatataaagcctttcacagaagaagatataaaaagaattaccagtgactacaacaccaatcttggaaatggtggattcggaaaagtttacaagggagttcttgatgataaccatttcgttgcagtgaagaagtatattaaaatggattctgaagaaatgtttgcccaagaagtacgtgttcacagtcaaatcaaccataaaaatgtagtcaggctaattggctactgcatcgagaaaaatgctccaatgatggtcatggagtatgtgcctaatagggaccttgattaccatcttcatgacaagaatagccttgattcattggacataagattggatattgctatagagtgtgcagatgctctagggtatttacattctatgtgcagccctgttctacatggtgatgtaaagccttccaatattctgctggatgacaattttaatgcaaaaataacagattttggaatatcgagacttctctcgacagacaaaactcatactgttaagtgtatagggagtataggttacgtggatcccctgtattgtcgggagggacgtctcacctccaaaagtgatgtttatagttttggaatagttcttcaggagcttatcaccaagaaaaaggcggcaagtctggctcaagctcttgctgaaggaaagggggtgactgaattgcttgatcccaaaatttgcaatgagagcaacatgaaggttttagtggagattggaaaattactacaggaatgcctaacagaggacattcatagacgtccggatatgtgcgacctggctgggcaccttcggatgcttaggaaattctgtttgagacaacctgctccactagaaaattttggttggcacctctttcctgaaacacagaatgaagataaagaacaaagccagcaaggtacaaacaatgtcagctccagtttgatggcgttccctaagatggcaggcattttcaaccggaacatgtacaaatctagaaagaaaggaacccctctgtatattagtggaaaaagaatgttcacagcacgtgaaataaaagtaataacaaataacaattcaacaattattggtagaggtgcatttggtaatgtctacctaggaattcttgagaattatagaaaggtggcagtgaagacatacataaaaggaactgaacatgaagaggatcgatgtggtaaagagctgaaccttcccgaactgatccataagaacattatccaactgttgggtttctgctgtaagctggatgctgtaatattggtttatgaatttgctaacaaagggagcctctacgacatactccatggtactagcaattttcctttcccactagatttacgtctagatattgctgttgggtcggcagaaggactggcatatatgcacagtagatccaaacccatactacatggagatgtcaaaacaacccatatactttttgatgacaacattgtgcctaaaatctcaggttttggatcatcacagataggagaagatagcacatgggttgtggcagctgacatcaattacatagaccgaaggtacattcaaaccggacttttcacacggaagagtgatatctatagttttggagttgttctcttggaactcatcaccaggaaacgaattttagatagtaagaaatgcagtcttgttgtcgagtatgtcaattgttatgagaaagaaaacagtgggaggattatgtttgacaatgagatcactgctgaggaaaacatggccacccttgaagcaattggcattctagcaatgaagtgtttaagtgataatatagatgaacgaccagaaatgagagaagtagccgaacaactggtgatgcttaaaatggcttggaagcagctcaaaggaaacatataa</cdnaseq>

Protein Sequence

<aaseq>MDLSESKHKEYIERAQWIEENISNIKPFTEEDIKRITSDYNTNL GNGGFGKVYKGVLDDNHFVAVKKYIKMDSEEMFAQEVRVHSQINHKNVVRLIGYCIEK NAPMMVMEYVPNRDLDYHLHDKNSLDSLDIRLDIAIECADALGYLHSMCSPVLHGDVK PSNILLDDNFNAKITDFGISRLLSTDKTHTVKCIGSIGYVDPLYCREGRLTSKSDVYS FGIVLQELITKKKAASLAQALAEGKGVTELLDPKICNESNMKVLVEIGKLLQECLTED IHRRPDMCDLAGHLRMLRKFCLRQPAPLENFGWHLFPETQNEDKEQSQQGTNNVSSSL MAFPKMAGIFNRNMYKSRKKGTPLYISGKRMFTAREIKVITNNNSTIIGRGAFGNVYL GILENYRKVAVKTYIKGTEHEEDRCGKELNLPELIHKNIIQLLGFCCKLDAVILVYEF ANKGSLYDILHGTSNFPFPLDLRLDIAVGSAEGLAYMHSRSKPILHGDVKTTHILFDD NIVPKISGFGSSQIGEDSTWVVAADINYIDRRYIQTGLFTRKSDIYSFGVVLLELITR KRILDSKKCSLVVEYVNCYEKENSGRIMFDNEITAEENMATLEAIGILAMKCLSDNID ERPEMREVAEQLVMLKMAWKQLKGNI</aaseq>

Gene Sequence

<dnaseqindica>2935..4887#gactacgccagtcgcctcccccctccctccgccggtgccagtgtccgtctcctcctacgccatcgacgccgcctccacaccagccggccactggtgagcgtttctcaagagagaaattaactgtattcatatatactagctagttcgtctgtctaggttttctctactgttgttcactagtattatgttacaagaatttgttgtcaataaacaacaaggtgagatctgttcaacgagttcttggattagatctgtttggctagttcttgcatcaaagatgccgatcagaagcttgtatactactagcagagtgaaactcaatttttttatccatcctggaccctccttttttcccccaattactactagcagagtgaaactcaaagatgccgcccacaccaccacagccccgcccctctctccacctcgccgctgccggagctcgtcagtggtgagccgggaaggcggcggcgaggccctccacttaggcgacttcttccttggcgcgaggaggacagagttaagccgacgacgcccacaaccacggccggaggtgaagacggcggggcggctcggggaggcggtggatccggcacctttgtggctgaatctggtcgccccttgtctggatagggcccgcgcgacggccaggtcttggcggcggcgcgcgggcggctgtggggcgttgtgggccaacacggaacggcggcccagggaccagcgtggtgtggttttgggcgaacggtggcagaggatccggtgccccgtggccagatctggtcgccccacgcccggctcaagccggcgcgggcggccgaggggcgtcacgggcctgtgcggggctgcgtagcgtggcgttgcctgggcggatggtggcggcggccctcccgaagggcgcgaccagctcagcagccgggcgatggcctggggttggcgcagcgcaacctgcgcggatatggcggcggccctctcggagggcgcggccagaaggctatggtcggtgcggcgtggcctgggcggtttggacggcggtgttgggatggttcgcccggaggccgcggtctgaccatctggtgcagcggtggtggcgttcgaggtggagatggcggtcgtaggccttgaggcagggcgcaaagggagcaatggcagtgctaagggagctggcagcggtgggtcgtcttcctcgttgtcgatctgcacccttgcccttcctggagctcctccccttctatgtggggagtttctatgttggattgaggcggcagccggttagcgagggaagctcagatcgccatcacgacgctgtctagttccgggttctctttcggccaaaactagcaaggaggccggcagatggtgggacggaggaggcctgggccagttcctaggggtggcggcagctctctgcagcaagtgtggtggtcggccggtggaggggtgccgacgtggtgcggtggaggcctcgtgctaatctgcttgcgagatggttcctgagttgatgggcgacgaacttcaagcaaggttgcatgggttctgggcgaaagcctcgcctgatggttcatcgggctggcagcggtgacgcctttgggcgtcgtaacctccttgggggcgttggcaatgatacccctctcccttggtgagtttcactaggtgaaaaccacatgttccttagatgggcgatggcggcgtctttgatgtcgtgacctccatgggggcatcgtttttcagagtctcgtctttgttgttttgtcgttggcccggcggcgatcggtcacgcatagcgggggtcgtttcggtgctaggttcttctctcaatgggttgtgtctgtgtggttagcatgtggctttggttgtgcattttgatgcacctccgtcctcgacagcttctgtcgagttttttcttgtaaactttattcctttttaatgtactcggatggcctccttcagccttctcggcgaaaaaaaaataccacttataattttatagtataccattataccaccaagatggtcatagagcttgcataaacgtcgactggtgctgtttggatcttctatcccaatctgtatctgttttggtaattggatgaattttactggaagttagactcgcacacaactaaggtcctgtttgtttcagcttgagattattgtaatctagattattaaatcagattactctaagctggattataataagctgacataaaataagctacgagttgtttgtttctctagattattagatgcatctaaggctagtgggtctttagccactcaataatctgaaaaaagctcttctagaggagattattgtattttagtaatctggcttatagattataataatctagcataataatctacttgtttgtttcagcttactcctaataatttagattataataattctaaactgaatcaaacagggcctaaatcctcgtataattaaaaggtgtcccaaacagggaaagacggcataacataatggacacaacaaatcttcaccctgaatccaaaagttcaaaggcatacaaatttatcctaaaacttgcggcgcaaaatagagctgaaggcgattgtattctgcaaaatatattaggtcaaatgaagtcaggctcgtatcaaacataaaccatttttcttgtcacatgcatataagaaacgacatcgattttcatgagattgttgaaaatttaatttaggttatgctttttgttttataagctgtcagcagttcaagttaaggtctgttgcaactctgctttttagggacaattacctttggaatatagccatatattttttatactatgcacatgtgtggtaaaaaaaaatctaacaatgcatttaaattgatatttaacttatacttatcatgtgaccaggccatcatcaatttatttgaagcaagaacgatcatattgtataattatggatctttcagaaagcaagcacaaagagtatattgaaagggcacaatggatagaggagaacatttctaatataaagcctttcacagaagaagatataaaaagaattaccagtgactacaacaccaatcttggaaatggtggattcggaaaagtttacaagggagttcttgatgataaccatttcgttgcagtgaagaagtatattaaaatggattctgaagaaatgtttgcccaagaagtacgtgttcacagtcaaatcaaccataaaaatgtagtcaggctaattggctactgcatcgagaaaaatgctccaatgatggtcatggagtatgtgcctaatagggaccttgattaccatcttcatgacaagaatagccttgattcattggacataagattggatattgctatagagtgtgcagatgctctagggtatttacattctatgtgcagccctgttctacatggtgatgtaaagccttccaatattctgctggatgacaattttaatgcaaaaataacagattttggaatatcgagacttctctcgacagacaaaactcatactgttaagtgtatagggagtataggttacgtggatcccctgtattgtcgggagggacgtctcacctccaaaagtgatgtttatagttttggaatagttcttcaggagcttatcaccaagaaaaaggcggcaagtctggctcaagctcttgctgaaggaaagggggtgactgaattgcttgatcccaaaatttgcaatgagagcaacatgaaggttttagtggagattggaaaattactacaggaatgcctaacagaggacattcatagacgtccggatatgtgcgacctggctgggcaccttcggatgcttaggaaattctgtttgagacaacctgctccactagaaaattttggttggcacctctttcctgaaacacagaatgaagataaagaacaaagccagcaaggtacaaacaatgtcagctccagtttgatggcgttccctaagatggcaggcattttcaaccggaacatgtacaaatctagaaagaaaggaacccctctgtatattagtggaaaaagaatgttcacagcacgtgaaataaaagtaataacaaataacaattcaacaattattggtagaggtgcatttggtaatgtctacctaggaattcttgagaattatagaaaggtggcagtgaagacatacataaaaggaactgaacatgaagaggatcgatgtggtaaagagctgaaccttcccgaactgatccataagaacattatccaactgttgggtttctgctgtaagctggatgctgtaatattggtttatgaatttgctaacaaagggagcctctacgacatactccatggtactagcaattttcctttcccactagatttacgtctagatattgctgttgggtcggcagaaggactggcatatatgcacagtagatccaaacccatactacatggagatgtcaaaacaacccatatactttttgatgacaacattgtgcctaaaatctcaggttttggatcatcacagataggagaagatagcacatgggttgtggcagctgacatcaattacatagaccgaaggtacattcaaaccggacttttcacacggaagagtgatatctatagttttggagttgttctcttggaactcatcaccaggaaacgaattttagatagtaagaaatgcagtcttgttgtcgagtatgtcaattgttatgagaaagaaaacagtgggaggattatgtttgacaatgagatcactgctgaggaaaacatggccacccttgaagcaattggcattctagcaatgaagtgtttaagtgataatatagatgaacgaccagaaatgagagaagtagccgaacaactggtgatgcttaaaatggcttggaagcagctcaaaggaaacatataagttgtcactttcaagacagccatgggaaaccaccaaagcttgacacagaagatttatgaggaatgaagtaaattagctcacaagatcttttcagcactacttgttctactagtatcgatcaattaagtttctcatgtttggtgtaattgttatctgaacttctgttagcatttggaacactagttatagcagtctgtatgttataagcagtaacagtaatttgctaccgctagtattccttttgatccgtgattaacaagtactattatccgacatgtcaaaggggaacaatagcaagcaaagtacacacaaatttaatttg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0142600, RefSeq:Os10g0142600