Os04g0667400

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Revision as of 11:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0667400| Description = 2OG-Fe(II) oxygenase domain containing protein| Version = NM_001060721.1 GI:115461171 GeneID:4337327| Length = 3147 ...")
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Gene Name

Os04g0667400

Description

2OG-Fe(II) oxygenase domain containing protein

Version

NM_001060721.1 GI:115461171 GeneID:4337327

Length

3147 bp

Definition

Oryza sativa Japonica Group Os04g0667400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:34466192..34469338

Sequence Coding Region

34466423..34467002,34467110..34467348,34467663..34467845

Expression

GEO Profiles:Os04g0667400

Genome Context

<gbrowseImage1> name=NC_008397:34466192..34469338 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:34466192..34469338 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcccgccgtggccgggagcttgtacatggcgagccagcacaagggagtgcctccgccgctgccgccgccgccgcggccattgccggtgatcaacctgggccggctcaccatggacagtgcctcgcgggcgctcgccgtgcgggatatcgtgctggcgtgccgtgaacgtggctgctttgaggtggtgaaccatggcatcagcaggtcttgcatgaatggcgccctcgaagccgcctccgagttcttccagctatcgacggagcgcaaggaggagttcgcgtcggacgacatccggcagcccatcaggtacgacacgagctcgagggacgggatcagcatgtccaggtcatttctgaagcactatgccaatcccctggacgactggatcaagttctggccgacgcagccaccaacttacagggagaaaatgggtgagtacgccgtggagacgcagcgagtgtcaatgcagctcatggaagcaatcctgcagggcctgggattagggccatcgtacctgcaagaaaagcttgaaggaggggtgcagttcgtggccttgaacaactacccgcagtcatcggcgaagaaagccgacaagatcggcttggctcctcactctgattatggcttcctcaccatcctgttgcagagctccccagggcttgaggtgatgcaccatgaggatgatgcctggacatctgtccctgctatccctggggctctccatgtccatgtaggagaccacctggaagtgttgagcaatggccagctcaagtcccttgtccatcgagccgttctcaacccaaacgagtcaaggatttctattgccagcatccatggtctctcgatggatgaagaggtccactgcgccgaagagctcgtcgatgaacaccaccccaaaatgtacaggggaagcagcttccaggacttcctggacttcctgccagcaaacatgaacaggtataagaggtatgtcgagagcctcaggatcgacaaaccctga</cdnaseq>

Protein Sequence

<aaseq>MPAVAGSLYMASQHKGVPPPLPPPPRPLPVINLGRLTMDSASRA LAVRDIVLACRERGCFEVVNHGISRSCMNGALEAASEFFQLSTERKEEFASDDIRQPI RYDTSSRDGISMSRSFLKHYANPLDDWIKFWPTQPPTYREKMGEYAVETQRVSMQLME AILQGLGLGPSYLQEKLEGGVQFVALNNYPQSSAKKADKIGLAPHSDYGFLTILLQSS PGLEVMHHEDDAWTSVPAIPGALHVHVGDHLEVLSNGQLKSLVHRAVLNPNESRISIA SIHGLSMDEEVHCAEELVDEHHPKMYRGSSFQDFLDFLPANMNRYKRYVESLRIDKP</aaseq>

Gene Sequence

<dnaseqindica>2337..2916#1991..2229#1494..1676#ctgacaagttttagaatggtcggttgaacacccaaactttctacgtcaaatgtaagatttaccagtttttttttcataaggcatacaaacttttttttttcatacgatcaccccacgtattggacttaatatcttgtctagtttagtccagggtgtagtcaccattttgctcgcacgaattttctgtggctcttatctaatgttagacgtggcaagattagccatcaaccaaacacctcgtcaatagcagagagggtgtgatgtcaccgtgttaaattttgacaataaaccaaacaatagccaaaaaggtgatcaaatttggttaaaaagtgtgataaactacgccaatgggaccaaaaggacctcagaagtatcttccgctgaaaaagtatcaaaaaaattcacaaaaagggaattaccagcgaaaagaaaactaagaaaagtttaaagcaccgtatcctgttttattttctctttcttggagcacttttgtttttatctaataacgatgattacctgctcgttgagaaaagttctctatttgttctttgccactcgctacaacatgggaagtgtgctactattccaacacttggagtactatttttacgcaataacgatgattacctgctcgttaagaaaagctttctacttgttctttgccactcgctacaacatgggaagtgctagcactactattctaacgtggaaaagcaaggctgttgctttcccccccttgaaactgaaaaaaaaaggagccattttgtcatgtcccagaatccaaaaccggaaaccccccctctgcatcggcaggtctcctccccccaactttgccgcgggattcgtcgtctccatcaccaccgtgagcaaaagacccaccaccacaagtcacccccaactccgcctgaaaaacaagcattatccagggatagacagagagagaaagcaaagcgggatgcacccagcggcaactcgcaggctgagggaggaataacaaaatgttcggcaggcagcagggtcactcatcacagtcacagatcgacggcgacacagctggtggccactatcttggatcgaaatggcctgcacctgtagctgctcatctggacttactaagcatgcactactacgaagtaagtagtggtagtagtagttgtgttgtgtgtgcatacgcaaacgcaacgcaagatgaggaggtgagccaattgcctgctcctggacagaatcgccctgaaaagccccaatattgatttggccgatacaagatggtctacgtgcaggggatttacccgctgcccagttggctctatgccatgccgctttcagtctctctgatgctgcagattcatcagagcttataaatacttgggcatctgtgctgtgctggaggcatcctgtgttctcaggaggtagtagtgcagtgcagtgcagtgtagagacctgtcctctgtgttgtttgctctcaagctcgccggagaagatagaagggtggcatgcccgccgtggccgggagcttgtacatggcgagccagcacaagggagtgcctccgccgctgccgccgccgccgcggccattgccggtgatcaacctgggccggctcaccatggacagtgcctcgcgggcgctcgccgtgcgggatatcgtgctggcgtgccgtgaacgtggctgctttgaggttagtgctgcttacttgtcaccaccctgcatcctcctctgcttgtcctgtcctccaacacctgtcagttgttattacacatgcatgtgataccagacacaagaatgttttgcttacacgtactctctctttctcataaaaaacgaatctagtaccggatgtgacatgaatgttttgcttacacgtagtacgtgaaaaggaagctgctgccaactcatgaaaatgagtaacaaaactgcatctgcatgcgaaactgacgaacgccagatataccagagacagctgatagaccattgtgctcgacttacctgcaggtggtgaaccatggcatcagcaggtcttgcatgaatggcgccctcgaagccgcctccgagttcttccagctatcgacggagcgcaaggaggagttcgcgtcggacgacatccggcagcccatcaggtacgacacgagctcgagggacgggatcagcatgtccaggtcatttctgaagcactatgccaatcccctggacgactggatcaagttctggccgacgcagccaccaacttacaggtaacctgcaaccgcaatgcagagatcatccacattagcacagtggtgagtgatcactggatgcatcttgacaaccatcctaacttgtgtgacaaatggcacaccagggagaaaatgggtgagtacgccgtggagacgcagcgagtgtcaatgcagctcatggaagcaatcctgcagggcctgggattagggccatcgtacctgcaagaaaagcttgaaggaggggtgcagttcgtggccttgaacaactacccgcagtcatcggcgaagaaagccgacaagatcggcttggctcctcactctgattatggcttcctcaccatcctgttgcagagctccccagggcttgaggtgatgcaccatgaggatgatgcctggacatctgtccctgctatccctggggctctccatgtccatgtaggagaccacctggaagtgttgagcaatggccagctcaagtcccttgtccatcgagccgttctcaacccaaacgagtcaaggatttctattgccagcatccatggtctctcgatggatgaagaggtccactgcgccgaagagctcgtcgatgaacaccaccccaaaatgtacaggggaagcagcttccaggacttcctggacttcctgccagcaaacatgaacaggtataagaggtatgtcgagagcctcaggatcgacaaaccctgaagaggaacagtggtagtgctgtatcagaacatatatagcaagatggcattattcggataaagtatttaaaccacctaaaaactcctacttcgggaagtttgttcgactttatgttggattgttggtcaaagaaaaagtgatgtcaatctgtactgtgcaacactgtaacacatgtaatcaatatttagttatacatccttagtaactatagctacaagagtacgtacagtt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0667400, RefSeq:Os04g0667400