Os04g0667800

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Revision as of 11:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0667800| Description = Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin carrier protein)| Version = NM_001060726.1 GI:115461181 GeneID:...")
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Gene Name

Os04g0667800

Description

Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin carrier protein)

Version

NM_001060726.1 GI:115461181 GeneID:4337331

Length

2364 bp

Definition

Oryza sativa Japonica Group Os04g0667800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:34486709..34489072

Sequence Coding Region

34486939..34487082,34487164..34487268,34487612..34487739,34488737..34488806

Expression

GEO Profiles:Os04g0667800

Genome Context

<gbrowseImage1> name=NC_008397:34486709..34489072 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:34486709..34489072 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtccaagaggatcctgaaggagttgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtcctgtgggtgaggacatgttccattggcaagctactattatgggaccctcagacagcccatttgctggtggggtattcttggtgaacattcatttcccaccggattatccttttaaaccaccgaaggtctctttccgcaccaaggttttccacccgaacattaatagcaatggcagcatttgcctcgacatcctcaaggaacagtggagtcctgcacttaccatatcaaaggtcctcctgtcaatttgttcactgctgacggacccgaaccccgatgatccgttggtgccggagattgctcacatgtacaagactgatagggccaagtatgaatccaccgctcgctcctggacacagaagtacgccatgggctaa</cdnaseq>

Protein Sequence

<aaseq>MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPSDSP FAGGVFLVNIHFPPDYPFKPPKVSFRTKVFHPNINSNGSICLDILKEQWSPALTISKV LLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYAMG</aaseq>

Gene Sequence

<dnaseqindica>1991..2134#1805..1909#1334..1461#267..336#ctccccgactcctcgcagcttcctcttgtttttcttggccgaaccccccctcgacacgccgtcgccgccgaggggagagagagagaggccgccggccgccgctaccactgaccccccccctcgccggagcgccccgtcgccggtcggtacgcgtctctaggcccccctctctctctcgatttgatcggtttgatctgtggtgccctaggtttgatctgtggatttattttttttcttgttttgtgggggtgattagggtttgatcgatggcgtccaagaggatcctgaaggagttgaaggacctgcagaaggaccctcccacctcatgcagcgcaggtgatttgatctctatcgccttggatttcgcccagatcttgccggattcgattgcgatgaacgtgttggtttgtgtggtttctgttgcgttttagatgcttgatttgcgggacacgcggatgttagactgttatttgcgtttagcatatggtgattatgatgatgcgtaatgtcttgtgaggatgatggttactagttgtgagtttcatcagggcaaggcaatcagtgattatgatgatgcgtaatgtcttctgaggatgatggttactagtttgagtttcatcagggcaaggcaatcaggcttaatagttgtagataatgtctattctgtttttgaattaagatgtgaaactgtttacacaagtagatcacattatgtgctcttcaactgcatatagaccaaagccatcataattacaacattgattgattagcacagtttatgaagaaagctacaataggctcatcatgggagttacatttgatgtgtctggcaaatcatgaatatttagagtatcgatttaaacagtacctacttcataataggcagatctgtcactatggaatgtctctcaccagttgagcacttcattcggtggatatctttgtaatttgtgtgctggttgcctgatggtctgtgtaaactccagcagatgtattggatgctttagtacaatatgtgtagtaattttgattgcaagatgctttttgccatatacatagatgaatgacatcttgcttcatctatagtaatcctatatatccaacatgaatgccacatggacatttcagtttgcatttgtgatttgtctaaactctactcaacttgtttggataacaactgttgtatagctcatgcagtcaggcttaagataaacattaattggcagtatatagcctgcttaatcttgaatcactttctacattatttaaactgaactctatgtccaaaatttgttttactcatctcgtgctgactacttttgtctgttgtcaggtcctgtgggtgaggacatgttccattggcaagctactattatgggaccctcagacagcccatttgctggtggggtattcttggtgaacattcatttcccaccggattatccttttaaaccaccgaaggtaatttctttgcttatgtgattcaacgccataccttacagtcattttcaatatcgtggtgtttagaactgcatttacatgataacatgagttcttggggccctcaataaaacattatctgctatctattttttcccttggattctaatgtttaggcgatgatcgaaataaacatatcagattcaacatccaaaaataaggtttatttcaatgttatgatgtttagagctaatgttatatgataacatgagttcttgggggtccccaaggacaacattttttgctctctgtattcttcacttggactctgactctgtatatatattatgatcttatttgccaggtctctttccgcaccaaggttttccacccgaacattaatagcaatggcagcatttgcctcgacatcctcaaggaacagtggagtcctgcacttaccatatcaaaggtaattatcagcatgacctgatttcaacattttggcccttctgtgacacctgatgaattgtgttatcattaattctaacaggtcctcctgtcaatttgttcactgctgacggacccgaaccccgatgatccgttggtgccggagattgctcacatgtacaagactgatagggccaagtatgaatccaccgctcgctcctggacacagaagtacgccatgggctaaagccagccaaactggtggacgtgtcgaaacccaacgacgttatcacctaaataaccatcaagtcaccactctccccccaacgaagtatgaatggacttttgagggctgttgtgcccagttgaactcatatgtaccctaccttgtgaagtccgtttcagtctggtagtctgttctacctgactgttctgttatttaagtcgtttcctaaatcatatttattattcgtgctt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0667800, RefSeq:Os04g0667800