Os04g0668900

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Revision as of 11:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0668900| Description = Similar to Plastid terminal oxidase| Version = NM_001060734.1 GI:115461197 GeneID:4337339| Length = 3006 bp| Defini...")
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Gene Name

Os04g0668900

Description

Similar to Plastid terminal oxidase

Version

NM_001060734.1 GI:115461197 GeneID:4337339

Length

3006 bp

Definition

Oryza sativa Japonica Group Os04g0668900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:34521451..34524456

Sequence Coding Region

34521964..34522169,34522474..34522521,34522619..34522690,34523085..34523153,34523265..34523373
,34523606..34523721,34523851..34523944,34524023..34524194,34524279..34524403

Expression

GEO Profiles:Os04g0668900

Genome Context

<gbrowseImage1> name=NC_008397:34521451..34524456 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:34521451..34524456 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggtcgcctccgcctccccgctccccgccgcggcggcgccctccacccgctgctcgccgccgcccgccttcctccctctccgtgcgcaccgcccccgcgtcggcaccgtcgccaccaggagggttttccgcgcggaggcgatgaggacgcagcgggagaaggagcagaccgaggtggccgtcgaggagtccttccccttcagggagacggctcctcctgacgagccactggtcaccgccgaggagagctgggtggttaagctcgagcagtccgtgaacattttcctcacggagtcagtcatcacgatacttgatggattgtaccgtgaccgcaactacgctagatttttcgtattggagacgattgctagggtgccgtattttgcgtttatctcggtgcttcacatgtatgaaacctttggctggtggaggagagccgattatataaaggtgcactttgctgagagctggaatgagttccatcacctcttaatcatggaagaattgggtggcaactctttatgggttgatcgttttcttgcacggtttgctgcatttttttactacttcatgactgttgcgatgtacatggtgagcccaagaatggcataccatttttctgaatgtgttgagaggcatgcgtactcaacctatgacaagtttattaagctccatgaagatgagttgaaaaagctaccagctcccgaggcggctttaaactattacctgaatgaggatctttacttattcgatgaatttcaaacagcaagagtcccatgttctaggagacctaaaattgataacttgtatgatgtatttgtcaatatacgagatgatgaggcagaacattgcaagacgatgaaggcctgtcaaacacatggaaaccttcgttctcctcactctatgcagaaatgcttagaaactgacaccgagtgtgtaatacctgaagatgactgtgaaggtatcgtggattgtgtcaaaaaatctcttgtgagtaaagagtga</cdnaseq>

Protein Sequence

<aaseq>MAAVASASPLPAAAAPSTRCSPPPAFLPLRAHRPRVGTVATRRV FRAEAMRTQREKEQTEVAVEESFPFRETAPPDEPLVTAEESWVVKLEQSVNIFLTESV ITILDGLYRDRNYARFFVLETIARVPYFAFISVLHMYETFGWWRRADYIKVHFAESWN EFHHLLIMEELGGNSLWVDRFLARFAAFFYYFMTVAMYMVSPRMAYHFSECVERHAYS TYDKFIKLHEDELKKLPAPEAALNYYLNEDLYLFDEFQTARVPCSRRPKIDNLYDVFV NIRDDEAEHCKTMKACQTHGNLRSPHSMQKCLETDTECVIPEDDCEGIVDCVKKSLVS KE</aaseq>

Gene Sequence

<dnaseqindica>2288..2493#1936..1983#1767..1838#1304..1372#1084..1192#736..851#513..606#263..434#54..178#cggttcttccctcttcccatttccgcgcggcgcaacaccttctggacgtcggcatggcggcggtcgcctccgcctccccgctccccgccgcggcggcgccctccacccgctgctcgccgccgcccgccttcctccctctccgtgcgcaccgcccccgcgtcggcaccgtcgccaccaggtaggccgtctcgcccctccccctccttgatcccgtctcctccacgcgcgctgacacgtgcgtctctgctgctgcttgtggcaggagggttttccgcgcggaggcgatgaggacgcagcgggagaaggagcagaccgaggtggccgtcgaggagtccttccccttcagggagacggctcctcctgacgagccactggtcaccgccgaggagagctgggtggttaagctcgagcagtccgtgaacattttcctcacggtaatttccaccagtcaaatcggatcaacatcaaattccatgcagattgggtaattttacaatctgttcgatccgcaggagtcagtcatcacgatacttgatggattgtaccgtgaccgcaactacgctagatttttcgtattggagacgattgctagggtgccgtattttggtgaggatctcgtcttacatgctcgctataacctgcaggtctctgaatttcgcaatatgcaagtatggttcctacacagtactgtactgtttcagttactgtttcactgactgcctgactattgaacagcgtttatctcggtgcttcacatgtatgaaacctttggctggtggaggagagccgattatataaaggtgcactttgctgagagctggaatgagttccatcacctcttaatcatggaagtatgtctctagctctttctgtctgcacatcagtgcattcatatatgctgtttcttcctgtttagatgtccttttagattatgttaactgttagcatatcccgttttctttaccttaatataatctttaaaggaattcaacctactgcttattgacacattagctgattttttaatatcttggttatggtctttgatgttctgactttattcctcatcttggttcatatcaggaattgggtggcaactctttatgggttgatcgttttcttgcacggtttgctgcatttttttactacttcatgactgttgcgatgtacatggtgagcccaagaatggcatgtaagtgtgcacctatgccaattatgaagtaaaacaatttatcatttttattccatgccttttctataatgaattaatgatagtgcttggaatcatttatcttatatacagaccatttttctgaatgtgttgagaggcatgcgtactcaacctatgacaagtttattaagctccatgaaggtaataaaacgtagatggatttaacatctctcctgtcgtgcaaaattttatcatgacaactagtaaaattctacttctgagtgatatttgttagagtaaattttatgactctttgattttggtggatttgtaataccttggctcttattggctttttggcttgcaccatcaagttggcaatgttgaggtgacaccgaattcgttgaacttaattatcaatctgccatttctgtaataaatctgaaagactaaagtcattatgaaccattttattagttcgttttttactcggtctttcttgaacaattttggtatcacactgggcgttgcaaagttttttggtcccaactggtttccagttccatgatttcagatgtttctttctttctaacagatgagttgaaaaagctaccagctcccgaggcggctttaaactattacctgaatgaggatctttacttattcggttagctcttgctttggctttatttacacttgaagcgtttatgctcagtattaagcattaccatctgttccctttgcttacatggttgttttcccagatgaatttcaaacagcaagagtcccatgttctaggagacctaaaattggtacggatgtccttctctctttcctcctttattagtttccttgagttaatcttttcagaaactttggattcttgcatgttatctgtagcatgtgagttcagtttcactgatccatctgatcaagtcattaaagtcatcagaaagttcctaacaaacagttctaatttaagatccatcgaaccaacattttgattcactttcagctgatcattagctgagtttctggatcctgattttttttcaacagtatatatgctgtgttgcctatgaagttgggttcactgtttttcatatcccgttgcagataacttgtatgatgtatttgtcaatatacgagatgatgaggcagaacattgcaagacgatgaaggcctgtcaaacacatggaaaccttcgttctcctcactctatgcagaaatgcttagaaactgacaccgagtgtgtaatacctgaagatgactgtgaaggtatcgtggattgtgtcaaaaaatctcttgtgagtaaagagtgactgatcctaattggaatggagtgcgtcatagtctcatagaatagagttttgataacagtcggtttccttttttctttcaaaagatagggaccactataatcttaacattcttgataatccttcagaataggctagctgtatcacaataaaaataatatattcatgagatagatgttactgcaagttgtgaagccctacaaaatttgcaatcttgatgtgctgtggttctatggaaagttcggttgcttgctgcttcttaagttcacaagctgctctgtaagggaaatggagatggctcatgatcaggcagcatacggtgaatatggtcagctcaaggtggaactgactcaaaccgtagaatttcgtgaagatgagaaggaagctcactgcagtatcgaagaagtcaatgcgaaatgaaaaatcaatcatactgctgctttgttttttctgaagatttatttgtcatttattcagtgtacagatgatactattacatctcaggcaaattactgt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0668900, RefSeq:Os04g0668900