Os04g0669300

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Revision as of 11:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0669300| Description = Dynamin family protein| Version = NM_001060737.1 GI:115461203 GeneID:4337342| Length = 3911 bp| Definition = Oryza ...")
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Gene Name

Os04g0669300

Description

Dynamin family protein

Version

NM_001060737.1 GI:115461203 GeneID:4337342

Length

3911 bp

Definition

Oryza sativa Japonica Group Os04g0669300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:34536770..34540680

Sequence Coding Region

34536883..34536967,34537069..34537148,34537355..34537423,34537514..34537571,34537731..34537780
,34537891..34537930,34538030..34538091,34538175..34538288,34538596..34538698
,34538819..34538868,34538981..34539109,34539207..34539458,34539652..34539731
,34539852..34539978,34540094..34540423

Expression

GEO Profiles:Os04g0669300

Genome Context

<gbrowseImage1> name=NC_008397:34536770..34540680 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:34536770..34540680 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggatcggactcgccgcccaagaaatggggcctcagggagcagcgcgaagcctacctccggtggttctccctcgccgacgacgatggagatgggcgcgtgacggggaaagacgcgctcaagttcttcgccatgtcgaatctctcccgccccgagctgaagcaggtctgggcaatcgctgattccaagcgtcagggttatcttggattctcggagtttatgaccgcaatgcagctggtttctcttgcacaagctgggaatgagattagtcaggacacccttgcacatgcagatttggagacgttgctacctccgacaatggaaggtctggacaaaaaactaaaaaataattctatgagcaagagcaactctgatattgtcgtacgtcatccgtcagaattgcctgcatcagccaactggtttaactccaagtcaggaaagaagattcctttaagatcagttacttcgatcatcgatgggttaaagaaatcttacattgagaagttgaggccactagaaaaaacatatcagttcgatgactttgtttcacctttgctgactagcagtgatttcgatgcgaagccaatggtcatgttgctgggtcagtattccacaggaaaaaccacattcataaagcatttactgaagacaaattatccaggtgctcatattggtccagagcctacaactgacagatttgttgttattacttctggacctgatgaaagatgcatccctggaaacacaattgccgtgcaagcagacatgccatatagtggcttgtcatcttttgggacagcatttctatcaaagtttgaatgttctcagatgcctcatccactactggatcatataacctttgtggacactcctggagttttatcaggggaaaagcagcgaacacagcgtagctatgacttcactggagttacatcatggtttgcagccaagtgtgacctaattcttctcctatttgatccacataagcttgacatcagtgatgagttcaagcgtgtaattgggtcactcaaagggcatgatgataaaatacgtatagttctgaacaaagcagaccaagttgatgcacaacaactcatgagagtctatggagcactgctatggtcgcttgggaaagttctgaacacaccagaagtcatgcgtgtgtacataggttcatttaacgacaagcccattagggagacagtagctgggccactgggtaaagaactgtttgagaaagaacaagaagacctgctctccgacctgaatgacattccaaagaaagcctgtgaccgtcgaatcaacgaattcgtgaagcgttcgaggtcagccaaggtccatgctcacataatcagccacctgaagaaggagatgccggcgctgatgggcaaggccaaggcgcagcagcggctgctcgacaccctcgacgagcagttcgccaaggttcagaaggagctgcacttgccggccggcgacttccccagcgtggatgagtacagggagacactgagcgcctacaacttcgacaagttcgagaggctgaagcccaagctggtgcagggcgtcgacgacatgctcgcctacgacatccccgatctcctcaagagcttcaggaacccctacgaatga</cdnaseq>

Protein Sequence

<aaseq>MGSDSPPKKWGLREQREAYLRWFSLADDDGDGRVTGKDALKFFA MSNLSRPELKQVWAIADSKRQGYLGFSEFMTAMQLVSLAQAGNEISQDTLAHADLETL LPPTMEGLDKKLKNNSMSKSNSDIVVRHPSELPASANWFNSKSGKKIPLRSVTSIIDG LKKSYIEKLRPLEKTYQFDDFVSPLLTSSDFDAKPMVMLLGQYSTGKTTFIKHLLKTN YPGAHIGPEPTTDRFVVITSGPDERCIPGNTIAVQADMPYSGLSSFGTAFLSKFECSQ MPHPLLDHITFVDTPGVLSGEKQRTQRSYDFTGVTSWFAAKCDLILLLFDPHKLDISD EFKRVIGSLKGHDDKIRIVLNKADQVDAQQLMRVYGALLWSLGKVLNTPEVMRVYIGS FNDKPIRETVAGPLGKELFEKEQEDLLSDLNDIPKKACDRRINEFVKRSRSAKVHAHI ISHLKKEMPALMGKAKAQQRLLDTLDEQFAKVQKELHLPAGDFPSVDEYRETLSAYNF DKFERLKPKLVQGVDDMLAYDIPDLLKSFRNPYE</aaseq>

Gene Sequence

<dnaseqindica>114..198#300..379#586..654#745..802#962..1011#1122..1161#1261..1322#1406..1519#1827..1929#2050..2099#2212..2340#2438..2689#2883..2962#3083..3209#3325..3654#gcgcggcaatcggggcattcgccagccacacctctctccatcctctcgttctctctctgtctcctcttctctctcccccgacggagaggagagaaggcgaggagccgggggagatgggatcggactcgccgcccaagaaatggggcctcagggagcagcgcgaagcctacctccggtggttctccctcgccgacgacggtttgccccccatcgctgagcacgacgccctctttatgtttttgtcttcctcgatctttgccggtgaaaatgtctctgaatctgttggtgtatgttggtagatggagatgggcgcgtgacggggaaagacgcgctcaagttcttcgccatgtcgaatctctcccgccccgagctgaagcaggtgcaaattctcttttaggcataatcagaattgtagaaaaaaggtgcacaattctggacgacaaccgtgattgttcgtagatatatataaaaaaagagagagaaagccaaacgtttggttatgaaattatggtgatgcacattttcttctgttatgaaattatgatcacaatccacaagcattacatttttccttggggcatttaggtctgggcaatcgctgattccaagcgtcagggttatcttggattctcggagtttatgaccgcaatgcaggtatgttcgtgacactgatttatttttgtggggcatttgtatttgatgctgcaattgatatggtacattaaagcacatgccgatgtgcagctggtttctcttgcacaagctgggaatgagattagtcaggacacccttgcacatgcaggtaaaactgatgcaattagtaattatatatacttttttttagataatggaaataggttacatctccggcctctgcccgtaggcagtaattatatatacttagcactagttatatttctgaagaaactattggcatactcaccatcaccttttacatcagatttggagacgttgctacctccgacaatggaaggtctggacaaaaaactagtatgtctgcatcgatcttttagtttcatttgcgttggaaaatgctgcagctacagcacacggacattttaatttctctaaccatttctccatttttttgatcctgaaagaaaaataattctatgagcaagagcaactctgatattgtcggtatggattgttacctttacctaggggggagttcctttttttctcttggttcatttggcccatatatagtttccaacttttatcttgccaatcatgcagtacgtcatccgtcagaattgcctgcatcagccaactggtttaactccaagtcaggaaagaaggtacaacaataacgcaggtgctgataatatgagtacatattattacaaatagttttacatgatgctaattattctctgcgcagattcctttaagatcagttacttcgatcatcgatgggttaaagaaatcttacattgagaagttgaggccactagaaaaaacatatcagttcgatgactttgtttcacctttgctggtgtgtcacctcccttatgaacttcaaatttcacatatactattccatcgcttgttggtgaaataatgcttgatacatcttatctattctgggtgtgtttagttcacgtcaaaattggaagtttggttgaaattggaacgatgtgatggaaaagttggaagtttatgtgtgtaggaaagttttgatgtgatggaaaagttggaagtttgaagaaaaagtttggaactaaacaaggcctctattcctctcagttggcatgcatgacttcctaatggagctttctacgtcatgtttttccattttgtagactagcagtgatttcgatgcgaagccaatggtcatgttgctgggtcagtattccacaggaaaaaccacattcataaagcatttactgaagacaaattatccaggtaaacaggatgaaatattgtgttccttttccttcttattgagaattatattttccattctctttctacacattttcccttgaaaaaaatgtaacaatatctgagttgtttctcttgcaggtgctcatattggtccagagcctacaactgacagatttgttgttattactgtaggttctatatggagatgtgtcaatttgctttgcctaacttttgtttgttctacctaacatatctccactgatcttcacttcccaatgatacatcctctcactactgcagtctggacctgatgaaagatgcatccctggaaacacaattgccgtgcaagcagacatgccatatagtggcttgtcatcttttgggacagcatttctatcaaagtttgaatgttctcagatgcctcatccagtatattccttctcttgcactgattattctacttcatatttttcattatgttgcactcagaaagaagctaattgttagcatcttttacattgccaagctactggatcatataacctttgtggacactcctggagttttatcaggggaaaagcagcgaacacagcgtagctatgacttcactggagttacatcatggtttgcagccaagtgtgacctaattcttctcctatttgatccacataagcttgacatcagtgatgagttcaagcgtgtaattgggtcactcaaagggcatgatgataaaatacgtatagttctgaacaaagcagaccaagttgatgcacaacaagtgagtgttattgctatccctttatagtgtgataacatattccattttcatcctctttatgcataggaaaaaaaatcatggagtgtgataagaaacattgatttgttttttacatttcaagtggagacaaaaaagagtagctatgttgattgaaagcaaataacgactttgcttctgacaaatttatcctcagctcatgagagtctatggagcactgctatggtcgcttgggaaagttctgaacacaccagaagtcatgcgtgtgtacatagggtatgatgtcatcttccccagaagcttcaccttcacatatggcaatgcatcgatcaatctgatggttttgcaaagatcacacaaccttaccactgacaattccaaattaacatgtgacagttcatttaacgacaagcccattagggagacagtagctgggccactgggtaaagaactgtttgagaaagaacaagaagacctgctctccgacctgaatgacattccaaagaaagcctgtgaccgtcgagtgagaagctcatcatcatcatcatcagaaacaccttttcttgcaagattacatatatatgctcactcatgctaaccattcattctgtcactgaaaaactgtttggtgttttcagatcaacgaattcgtgaagcgttcgaggtcagccaaggtccatgctcacataatcagccacctgaagaaggagatgccggcgctgatgggcaaggccaaggcgcagcagcggctgctcgacaccctcgacgagcagttcgccaaggttcagaaggagctgcacttgccggccggcgacttccccagcgtggatgagtacagggagacactgagcgcctacaacttcgacaagttcgagaggctgaagcccaagctggtgcagggcgtcgacgacatgctcgcctacgacatccccgatctcctcaagagcttcaggaacccctacgaatgaatgagcaagcagcagcagtcagagaaggcgtgttcgaccacaatacaagcatggatctttcttgttcacaaaaaaagaatgtgatccgtgaatcgtcaatccatctcttttgtgctccacgaaggcgcgatatatggctttttgttggcgattttcttcagtcttctgcagtgatctctgaagaaggcagtgtgacaggaatgtgcaaagtgaagccgattggaaagtttggaacagcgttaaactgggcttgggct</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0669300, RefSeq:Os04g0669300