Os04g0670200

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Revision as of 11:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0670200| Description = Similar to Oryzain beta chain precursor (EC 3.4.22.-)| Version = NM_001060746.1 GI:115461221 GeneID:4337351| Length ...")
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Gene Name

Os04g0670200

Description

Similar to Oryzain beta chain precursor (EC 3.4.22.-)

Version

NM_001060746.1 GI:115461221 GeneID:4337351

Length

3377 bp

Definition

Oryza sativa Japonica Group Os04g0670200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:34571898..34575274

Sequence Coding Region

34572159..34572224,34572535..34573002,34573079..34573219,34573316..34573554,34574684..34575170

Expression

GEO Profiles:Os04g0670200

Genome Context

<gbrowseImage1> name=NC_008397:34571898..34575274 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:34571898..34575274 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgcccgcgccgccgccgccgcgttcctgctgctgctcatcgtcggcgcggccaccgcggcgccggacatgtcgatcatctcctacaacgcggagcacggggcgcgggggctggaggaggggcccacggaggccgaggcgcgcgccgcgtacgacctctggctcgccgagaacggcggcggctcgcccaacgcgctcggcggcgagcacgagcgccggttcctcgtgttctgggacaacctcaagttcgtcgacgcccacaacgcccgcgccgacgagcgcggcgggttccgcctcgggatgaaccgcttcgccgatctcaccaacgaggagttccgcgcgaccttcctcggcgccaaggtcgccgagaggagccgcgccgccggggagaggtaccgccacgacggggtggaggagctgccggagtccgtcgactggagggagaagggcgccgtcgcccccgtcaagaaccagggccaatgcggaagctgctgggccttctccgcagtaagcacagtagaaagcatcaaccaacttgttactggtgagatgatcacattgtcggaacaagaacttgtagaatgctcaaccaatggacagaacagtggctgcaacggtgggctcatggatgatgcctttgacttcatcattaagaatggaggcattgatactgaagatgactatccttacaaagctgtagatggcaagtgtgacatcaacagggaaaatgctaaggttgtgagcatcgatggctttgaggatgtacctcaaaatgatgagaaatcacttcagaaggcggttgctcaccaaccagtcagtgttgctattgaggctggtggccgcgagttccagctctatcattcgggcgtcttcagcggtaggtgtggcacaagccttgaccatggtgtggttgccgtcggttatggcactgacaatggcaaagactactggattgtccgcaactcttggggcccgaagtggggtgagtctggatacgttcgcatggagcgcaatatcaatgtgaccacggggaagtgtggcattgccatgatggcatcataccctaccaagagcggagcaaacccacccaagccatctccgactcctccaactcctccaacaccacctcccccatccgcccctgaccatgtctgcgatgataacttctcttgcccagcgggcagcacctgctgctgcgcattcggcttcaggaatctctgcttggtttggggctgttgcccagttgaaggtgcaacctgctgcaaggatcatgccagctgctgcccgcctgactaccctgtctgcaacacccgggctggaacctgctcagcgagcaagaacagcccattgagcgtgaaggctttgaagcgcacgctcgctaagctgaacaccgcatga</cdnaseq>

Protein Sequence

<aaseq>MAARAAAAAFLLLLIVGAATAAPDMSIISYNAEHGARGLEEGPT EAEARAAYDLWLAENGGGSPNALGGEHERRFLVFWDNLKFVDAHNARADERGGFRLGM NRFADLTNEEFRATFLGAKVAERSRAAGERYRHDGVEELPESVDWREKGAVAPVKNQG QCGSCWAFSAVSTVESINQLVTGEMITLSEQELVECSTNGQNSGCNGGLMDDAFDFII KNGGIDTEDDYPYKAVDGKCDINRENAKVVSIDGFEDVPQNDEKSLQKAVAHQPVSVA IEAGGREFQLYHSGVFSGRCGTSLDHGVVAVGYGTDNGKDYWIVRNSWGPKWGESGYV RMERNINVTTGKCGIAMMASYPTKSGANPPKPSPTPPTPPTPPPPSAPDHVCDDNFSC PAGSTCCCAFGFRNLCLVWGCCPVEGATCCKDHASCCPPDYPVCNTRAGTCSASKNSP LSVKALKRTLAKLNTA</aaseq>

Gene Sequence

<dnaseqindica>3051..3116#2273..2740#2056..2196#1721..1959#105..591#ccaaaaaaccacaaacccaacgaagaaggaaaaaaaaaggaggaaaagaaaagaggaggaaagcgaagaggttggagagagacgctcgtctccacgtcgccgccatggccgcccgcgccgccgccgccgcgttcctgctgctgctcatcgtcggcgcggccaccgcggcgccggacatgtcgatcatctcctacaacgcggagcacggggcgcgggggctggaggaggggcccacggaggccgaggcgcgcgccgcgtacgacctctggctcgccgagaacggcggcggctcgcccaacgcgctcggcggcgagcacgagcgccggttcctcgtgttctgggacaacctcaagttcgtcgacgcccacaacgcccgcgccgacgagcgcggcgggttccgcctcgggatgaaccgcttcgccgatctcaccaacgaggagttccgcgcgaccttcctcggcgccaaggtcgccgagaggagccgcgccgccggggagaggtaccgccacgacggggtggaggagctgccggagtccgtcgactggagggagaagggcgccgtcgcccccgtcaagaaccagggccaatgcggtaaggaatttcttctctttcctcatctcatctcccttgtgcgattatttaccattgaaagcttagatgcgattatctatttgtcacgctaatctcggatctaagtagggcaatttcacaacagttaattcaggttcacagctagtaatcttttgcccctacttgcaaaacagtgcagatttccttctgatatatacataatataatagtagattatgattatatagtcacacaccgtctagtctctagaaaagatgggtcatttttctagctaaagctgactttcccccctgaatgagcatatctgatttaatgacagagttattgttcttttaatacgatgataatttactggaccgaataattgtttggaattctatggtaaggatttattacgtagtggatgcaggatgtattcttggaaaatcctctcattgggttaactgtgtaaggtatttgttctcttcgttctttgcttctggagttggcaacggctgtgacttgtgaatcgtgcagtgacagcggtgtggacttgaacagattcaaagcccgccgttggttggggctgacttgctcagtgtggtttccttgtttccaggattgtagtttagcttagcttgttttttcctgattttaggactgccgtttctgtggttgtgctgcttttgtctttatatttttaaaggtctttttcggtgcatctatcagtcaaatactttggacaaggtgaccctgtaaccaactactaagacattaaaccgatttgatgatgttgctttgcattgcaactattttgggcctttaagacttttaagggatatcacaccttatcaacctttcgtgttcagtcgagcaaactttttatcctgtgctgggagctgtttgctgatattagcctacaggtgtcttcaaactgcttttgtgggtaaaaacaggggtgaaacaaatgtctgcaaatatcttactatccatcttgatcttgataatattgatacaattaaacagtttagggttcttgcctcatattacaattggttgcttgcggtatgattgcagttgttgctctcttggatgacactagttattttgatggttactgacatctttggtcttgaatggtgggatgcaggaagctgctgggccttctccgcagtaagcacagtagaaagcatcaaccaacttgttactggtgagatgatcacattgtcggaacaagaacttgtagaatgctcaaccaatggacagaacagtggctgcaacggtgggctcatggatgatgcctttgacttcatcattaagaatggaggcattgatactgaagatgactatccttacaaagctgtagatggcaagtgtgacatcaacagggtattaacttattttctgatgaataacttcatacattcatctttcagttcccacattatgcaaatcgctaatgtttcaacgggtgcattgttttaggaaaatgctaaggttgtgagcatcgatggctttgaggatgtacctcaaaatgatgagaaatcacttcagaaggcggttgctcaccaaccagtcagtgttgctattgaggctggtggccgcgagttccagctctatcattcggtaaatgaacttgcagatatcaccccatgcatataggaggttttggtcgtaacaactattgatttttacattacagggcgtcttcagcggtaggtgtggcacaagccttgaccatggtgtggttgccgtcggttatggcactgacaatggcaaagactactggattgtccgcaactcttggggcccgaagtggggtgagtctggatacgttcgcatggagcgcaatatcaatgtgaccacggggaagtgtggcattgccatgatggcatcataccctaccaagagcggagcaaacccacccaagccatctccgactcctccaactcctccaacaccacctcccccatccgcccctgaccatgtctgcgatgataacttctcttgcccagcgggcagcacctgctgctgcgcattcggcttcaggaatctctgcttggtttggggctgttgcccagttgaaggtgcaacctgctgcaaggatcatgccagctgctgcccgcctgactaccctgtctgcaacacccgggctggaacctgctcagcggtaatctcctcgctttcttgttcgttcttactgcaactttatactgcctacattctattccaaagattgttttcatcatagtattctgctccgacaagctatacggttttgaaaaggcacgaggctttcatgatctgaactcagcaaatatttgtcatcatgctttttctgaaaaaactagacattaaggttgctttggctccaaagatagttcagataactgtaatgcactaactgacctttcttctgttggaattgtgcaagatatttgaacgtacgaactgaccttccttttgttggaattgtgcagagcaagaacagcccattgagcgtgaaggctttgaagcgcacgctcgctaagctgaacaccgcatgagctcatcgataacatgtaatcggcgaggagaggggatgaggcagcgtggagcctttctgaaatttctgcttccgtgcctccatatatcgttgtcgcattttgaggggacagcttatttactctactgcctgccttttatcttacagtgatctgtgtacatagctcgatccaatttgtactcttatttatcttctccaatttgtactctatataatttatcatctcaagaatacattaacgaagatcctgttttaccgttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0670200, RefSeq:Os04g0670200