Os04g0670800

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Revision as of 11:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0670800| Description = The start codon is not identified.| Version = NM_001060751.1 GI:115461231 GeneID:4337356| Length = 4279 bp| Definit...")
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Gene Name

Os04g0670800

Description

The start codon is not identified.

Version

NM_001060751.1 GI:115461231 GeneID:4337356

Length

4279 bp

Definition

Oryza sativa Japonica Group Os04g0670800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:34616602..34620880

Sequence Coding Region

34616603..34616764,34617335..34617412,34617513..34617581,34617779..34617922,34618078..34618180
,34620106..34620380,34620461..34620625

Expression

GEO Profiles:Os04g0670800

Genome Context

<gbrowseImage1> name=NC_008397:34616602..34620880 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:34616602..34620880 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gttcggcctaattcaacagttgcatttcgtaactttgaagaggagtcaaggcaatctgctgtttgggattctgagcagaatgctgcatctagttctcgtgataatctggcggcattgtatcgtccaccatttgctttgatgttcaatggacccttcgacaaggcaaagttagaggcttctgttctggacaagtggctcttgatcaatttgcaatcgactgaagagttcagctctcacatgcttaatcgggacacttgggctaatgaggctgtggctcagacaattcgatcgaactttattttctggcaggtttaccatgacaccagtgaggggaggaaggtatgcacctactacaatttggtctctgttcctgccattcttctgattgaccctatcactgggcaaaaaatgcgtgggtggaatggaatgattcacccggaccgtttgctggaggatttgatgccttacctggacaaaggtccaaaggagcaccatgcagctcaacctcaaaaacggccaagaaaagttgatcaggaaacttctatcggcaaacaaggtaaaacccctgtacccgtagtagccacagaggatgaagacgaagaactagcacgggcagtagcggcttctcttgaggagagtaaaggctctgacactagtgaggaaaagattgaacctgaggtagaaaatgagcctagcctgagtgctaagctgaactatcctcctctccctgaagaacccaaaggaagtcgggagcttttgtgcagagttgcaattcgcctacctgatggtaggaggatccagaggaatttccttcacacggatcctattaagctcctgtggtcattctgctatcctcaagtggaggacggggataagaaggctttccatttcgtacagcccattcctagggcatccacaaacctggagtacgagagtgataaaactttcaaagaagccgggttggccaactcgatgatcaaccttttgtgggactaa</cdnaseq>

Protein Sequence

<aaseq>VRPNSTVAFRNFEEESRQSAVWDSEQNAASSSRDNLAALYRPPF ALMFNGPFDKAKLEASVLDKWLLINLQSTEEFSSHMLNRDTWANEAVAQTIRSNFIFW QVYHDTSEGRKVCTYYNLVSVPAILLIDPITGQKMRGWNGMIHPDRLLEDLMPYLDKG PKEHHAAQPQKRPRKVDQETSIGKQGKTPVPVVATEDEDEELARAVAASLEESKGSDT SEEKIEPEVENEPSLSAKLNYPPLPEEPKGSRELLCRVAIRLPDGRRIQRNFLHTDPI KLLWSFCYPQVEDGDKKAFHFVQPIPRASTNLEYESDKTFKEAGLANSMINLLWD</aaseq>

Gene Sequence

<dnaseqindica>2..163#734..811#912..980#1178..1321#1477..1579#3505..3779#3860..4024#cgttcggcctaattcaacagttgcatttcgtaactttgaagaggagtcaaggcaatctgctgtttgggattctgagcagaatgctgcatctagttctcgtgataatctggcggcattgtatcgtccaccatttgctttgatgttcaatggacccttcgacaaggtcagctatcctttttttcttatttaacgtctggtgttacctttttatctctaacatgaccatgtgctgcctttgcctgcaaacttcaataacctgctttgtctgtgggcatttggtatgcattgggaaaattgcaatattctattagtgacatactgaattgttatcatggagcagcacgccatgtaacccacgaactcttcatttatctcagctgctaacaatcctacctgtcaaataattagttcggtttattagctgctaaggttcagtttattactcaagcaaacattgcctcccttttgtcaacaagaggcatggtcaaacatgcttcttaatgttctttgttcacactatttatcattgaaagtacattgatgtttttattagttgttgcaaattcatttgttgtctaatgaccagtgcacgagaactagtaaactgctactaattttcatgtgaaagcctggagctgatgaacttcataatactaatttgattatcctttaattttctataacctaccaatttaattcagatttctaaaaacaatgaatttcataaatgtaggcaaagttagaggcttctgttctggacaagtggctcttgatcaatttgcaatcgactgaagagttcagctctcacatggtacagatcttaccattaatgtcatgcagccttgtgttaacccttcattctttttcctgcattggcaaagtttttactcttgagtgtttctttcatgaagcttaatcgggacacttgggctaatgaggctgtggctcagacaattcgatcgaactttattttctggcaggttggtccttactcctttgtttcgccttctatacctgagccacataactgtatctccaatttttattcctgatgtattaggaatagtattggaaagaaagagtttctaatgttcactttttttcccaaaccccaagatggatcaaatttttagcatctctagttgtctactgatatgttctatcatcttaaatataggtttaccatgacaccagtgaggggaggaaggtatgcacctactacaatttggtctctgttcctgccattcttctgattgaccctatcactgggcaaaaaatgcgtgggtggaatggaatgattcacccggaccgtttgctggaggtaatttggtaaccctatcgacctactatctttcatctctcatgttactaacttctgtagtgataacattcttacttccacattctaatactggaatcttaactgtgatttgacatggtattccttgttactgtctgcatgtgaactgtccacaggatttgatgccttacctggacaaaggtccaaaggagcaccatgcagctcaacctcaaaaacggccaagaaaagttgatcaggaaacttctatcggcaaacaaggtatggcttgtgtccaaagatatgttaactagcagtgatgtttttttttccctttgaaacatttaagctcgaatagtttgtttctgcagaactattatatgaaccaagcacattagtacataaataaccatatgttgagcctatcttttttcgttgcaatctttcttcacattatatggatttatcttttaacacggtgaaataacttttttgtggaatagatgcatagttaatgctaagttcgtgacaatcgaaacttcatctgttaaagatatggggcttccatacaatcaaaactttcaaaccttgtgagtggatgtccaattcttgaaaaagtagcagggatgattgtcatgtgagggtgcctctaggtgcattgtgttttgttttctagtacttagtataacagcatcagcctttgttcccaatcaagttgggggtaggctagctgtactagcatttgatgctttacaaaattggataagggggagcggtgttcatttgtatcatccaactacagttaggtcgttcttacactacataagcgtgatttccaggagcagttggtcattgggaggttgcttgtaattgttatgagagtaaatttcacaaaactacagatactatgaccaaattatcaccaaactacagatttaactcggtgtatcacaaaactacatatttaacaccaaatttatcacaaaactacacatttaagatgaagtgtcacaaaactacatatttagtaactaaattatcacaaaactataggtttagaatcaattaaatcacaaagtaatgatgtttatagctccaccataacaatggtgctagggatttaaactccaaaagttgtagttttgtgataagttcaatattaaatatgcatttttatgatacttaatctaaaatctgtagttttgtgataaatttggtgctaaatatgtagttttgtgatacaactccttaaatctgtagttgtgataatttggtcaaaatacctgtagttttgtgaaatttactcttgttatgaattatgatataacgatgattatctggtggatgtgcctggcataatcactgacctttatgggagtcggaggattggccttacgagtcattctatcctcatacatcatctgtcaccagattttatcctgttggtgatagctggcaataagttttagtggtttatttcaacttgtttttggcaggtacttctagatattaaggattcttaatggcccagataacacaataattggatagtatggacacgagactcaatggacattttttataataggaaaatcattggaaatgtatggtttctggcagtacttgtcttagccatgtttcaaacttggatatgaatcatcgctgacatatcactttccattaacactcatcttgaacaatgataatgcataacatagaccagacgcaaggaaaaaaaatatttcagtagtctatatgtcaacaacaatttatttgttgtgtagttaggaattagaatttaaatcatgtctaatcacagttatctttaggcaaaagtcacaactggttttgccaccctctgacaacgatggtctttgtgtgtcgattgtaagttaaggttatttcaaatttgacttgtgataagcaactacccagatttatttgcaagaggggtaggcataacaaaagttagcgtaagctctccatgcatggcatgacatgcacaaagaaaatttgtaattttcaatattaccggtatggtcatatggatgccactacttaaggggatattttgatggattaatttcgcagcattgattgtgtgtgtgtgtgtgtgtttttttttattattatgttaggatctggttacgtgcaatgcatttcaaggttgaccaaaagcacatgttcacagttccatttctttgtaggtaaaacccctgtacccgtagtagccacagaggatgaagacgaagaactagcacgggcagtagcggcttctcttgaggagagtaaaggctctgacactagtgaggaaaagattgaacctgaggtagaaaatgagcctagcctgagtgctaagctgaactatcctcctctccctgaagaacccaaaggaagtcgggagcttttgtgcagagttgcaattcgcctacctgatggtaggaggatccagaggaatttccttcacacggatcctattaaggttagaacactgaaataaatttccatagttttgtctcttctcctacattgttcgctgatgctttatccatctcgccgcagctcctgtggtcattctgctatcctcaagtggaggacggggataagaaggctttccatttcgtacagcccattcctagggcatccacaaacctggagtacgagagtgataaaactttcaaagaagccgggttggccaactcgatgatcaaccttttgtgggactaaaagcctattttatcaactcatgttatttctttattggctccaagtcaagattatcgagtgattttctgtgagggttcataattgcttctcttatttttctttttccctcctggtgcttggagccaaatgacgaatctggtttctttggtgtggaaatgcccatattccttttgtagtggttcctagtatgtttatagaactcttgagtaggtttactccagttctcttttaatgcatataatattattatacctg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0670800, RefSeq:Os04g0670800