Os04g0672200
| Gene Name |
Os04g0672200 |
|---|---|
| Description |
Poly(ADP-ribose) polymerase, catalytic region domain containing protein |
| Version |
NM_001060759.1 GI:115461247 GeneID:4337365 |
| Length |
5680 bp |
| Definition |
Oryza sativa Japonica Group Os04g0672200, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:34712940..34718619 |
| Sequence Coding Region |
34713334..34713340,34713453..34713630,34713725..34714922,34715471..34715566,34715670..34715798 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:34712940..34718619 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:34712940..34718619 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcatcaccacaagaatccaattccttgtgcttgaagcgcaagcttgttgatgactgcctgtcaaaagagtgcaagtctcgtcgcatcaaaactgagaagggaccatcatctgattcatctgccaagcgctgcaaatgctgttgcactcgacctaaccttgccagtgattgtgtcaattacctaaaaagtggagtgcccagccgtgttatgttttacaaacagggttcttggcacaattttcctgagcagataatgaagtctctcattgaagaatttagaagcaataaatctagtgttgttgctgtgatggacgatgagcctgttcttgttgatttcttgtcgatgaccctggtcaacctaaaatctagaaagcagcggtctgtggcatggtttgatgacactgggaagtgcttttatccttctctattctttgatgaggaagctgatgaagtggctaaagtaggcggtgattttgagggcgccacacagggaataatgttggataaggttgcaaattctccaccagaagtggtgaagcaagttgtccttgaatctagtcctccagttccacagaagcctgccactgcagacatattacgcaaaaagatcgcatctgtggaacgaggcagtgaaggctttctttttgcgcaggaccttttcctctctggcatgggtccatttgcaacgccaaataatatactgcacatccaccgctactctccgaatgatatcactgcacagtgtagacttcaagcttttgaaaaacaaatgatgtccaccaaggaagaacgtggtgatgcaaatgtaaggtatggatggctgggatctaggaagaatgacatagttaggatcctaattaatggttttggtaacaatggaaaacctgctgagaaggcaggcttgagtgctggtgtttatctttcaccagaagaccgagcattttccagtgttggtctttgtgatgttgacgaaaaaggagtgcaatatatgttgctctgccggttgattttggggaacatggaggctgtcatgcctggatcacaagattcttttccaagcagtgacatatatgattctggtgttgatgattgctcaaatccaaagtgctacgtcatgtggccatctcatcttagcacccatattcgtttagaatatcttgttagtttcaggctttcctcgaaagttcgaaattatttacttggtttgaagggtttatggtttcacccatcaccaaaggaagttgcggtggatatttctactcttgtacctataatgagtggaaatgctgagggaccaacttccccttggatatccttcagagttctttttgccatgattcaagaaaatatatcatcggtagcaagggaattgctcttccatcattatgaagagctgaaggaaaacaaaataactcgtgaggagatggtaaagcaaatgataatattagttggagagaagttgcttttggaaaccttgaagaggcttcattactgtccatcattatggtataaatctgctggcaaaatagcatcttctgatcctgcgaggacagctgcagaagacaggtctttggatcaaactgggaattgttcattaattgttagtgttgcgcatggtgattctcatgccccaaatgcagtagctgaaaacagcaccagtctttgcaccaaaggatgtgatactcctgcaacaggcatgatttccaagggctatgattctctggcaccaaaaggtgtgccggaaacttctacttctgtcggccccgtacatggggcttctccaagtgtggaacccaaagtgagggattctcctatacaaaccgttttatcaggaaacattgctactgattgtgccaaaaggcaagatccattggtatcaagagtggcacctgtagctcataatggccttttaaggatgccatctggaaaatcagcatctctcgcagcgcaagtttgcaattctgttagaccaagcacaggaccttcaggtcgtgcttctacagaaccaaataatgcctctaaaagttgtgggatttttgctccgggtatcaggccaaagggtggtgaatctcttgttcctagtttggcattaggaaattccaaatatgcaggtgtagaaggtctcaattctgcaccaagagcgacacctccgggtattaggccaaagggcggtgaatctcttgttcatggtttggcattgggaaattccaaatgtgcaggagcagaaggtatcaattctgcaccaagagtgactccactgggtatcaggccaaagggcggtgaatctattgctcctagtttggcattgggaaattccaaatgtgcaggtgcagaaggtatcaattctgcaccaagagtgactcctccgggtatcaggccaaagggcggtgaatctattgctcctagtttggcactggggaattccaaatgtgcaggtgcagaaggtctcaattctgcaccaagagtgacacctcccggtatcaggccaaagggcggtgaatcttttgttcctagtttggcattgggaaattccaaatgtgcaggtgcagaaggtctcaattctgcaccaagagtgacacctaaagacaaggagtttctttcattgagtatttcatcacaacaaagcccagttcttaattcaggtaaaggccatgatgggacatcaggtgccgcacgtccagtacatgcaccagggcatggaaatcctaaagctttggccactgaggcccgtggttctctatctctgagtattgcaccgaatgtccatgaccctccagcatcaagtaaggagcctaaggacgatgcatctccaatagcaggcatggtctcagaaagccagcactctcaagcacctaatgcagtcaccaagggtacctaa</cdnaseq> |
| Protein Sequence |
<aaseq>MASPQESNSLCLKRKLVDDCLSKECKSRRIKTEKGPSSDSSAKR CKCCCTRPNLASDCVNYLKSGVPSRVMFYKQGSWHNFPEQIMKSLIEEFRSNKSSVVA VMDDEPVLVDFLSMTLVNLKSRKQRSVAWFDDTGKCFYPSLFFDEEADEVAKVGGDFE GATQGIMLDKVANSPPEVVKQVVLESSPPVPQKPATADILRKKIASVERGSEGFLFAQ DLFLSGMGPFATPNNILHIHRYSPNDITAQCRLQAFEKQMMSTKEERGDANVRYGWLG SRKNDIVRILINGFGNNGKPAEKAGLSAGVYLSPEDRAFSSVGLCDVDEKGVQYMLLC RLILGNMEAVMPGSQDSFPSSDIYDSGVDDCSNPKCYVMWPSHLSTHIRLEYLVSFRL SSKVRNYLLGLKGLWFHPSPKEVAVDISTLVPIMSGNAEGPTSPWISFRVLFAMIQEN ISSVARELLFHHYEELKENKITREEMVKQMIILVGEKLLLETLKRLHYCPSLWYKSAG KIASSDPARTAAEDRSLDQTGNCSLIVSVAHGDSHAPNAVAENSTSLCTKGCDTPATG MISKGYDSLAPKGVPETSTSVGPVHGASPSVEPKVRDSPIQTVLSGNIATDCAKRQDP LVSRVAPVAHNGLLRMPSGKSASLAAQVCNSVRPSTGPSGRASTEPNNASKSCGIFAP GIRPKGGESLVPSLALGNSKYAGVEGLNSAPRATPPGIRPKGGESLVHGLALGNSKCA GAEGINSAPRVTPLGIRPKGGESIAPSLALGNSKCAGAEGINSAPRVTPPGIRPKGGE SIAPSLALGNSKCAGAEGLNSAPRVTPPGIRPKGGESFVPSLALGNSKCAGAEGLNSA PRVTPKDKEFLSLSISSQQSPVLNSGKGHDGTSGAARPVHAPGHGNPKALATEARGSL SLSIAPNVHDPPASSKEPKDDASPIAGMVSESQHSQAPNAVTKGT</aaseq> |
| Gene Sequence |
<dnaseqindica>5280..5286#4990..5167#3698..4895#3054..3149#2822..2950#2554..2633#2225..2466#1194..2143#gcgatgctggtggagtgtggcgtcgcgacctagccctagccctagcgccaccgccaccgccaccgccaccgcctgctcgctcgctcgattccccggctccccgtcgctacctcgctacctcgccgcgccgccacagccgccggcgccgtctctcaccgggatcgggacaacaagcgccgcgccgttcagtcaggcgacgggggcgtgcgtctccgctctctggggggcctcgacgtcgcctcgccggtgtttcggaagaccgtcggcctggttggtatctctgattgcttgattactgctagggaatggatgggtggatgtcgtcgacggggtgggtttagctttagcggattagcgcgtatcacatcccctgattccagtcgagtagacaggataatagcaggtggagggtttgaattttttagttatataaaaggataccttacgttggtgctgtttgatggattggtagaggtggtgctattcttcccttcatcagaatgtcaagcggcttgcttcgtgtgtagattactactagtatttttagggtttgggtgcctgctaatgtcaccgaataggtttcgttagcttcttattaatgtttttaatgcactttgtcgcgatatggatagcgagaactgctatttgtgccgttttgagatggtgtgtgtaatttactatgtcgttatgggatgtttttttttttgtctattcctttggctcacgtgtccctcctgctgcaatactcatttttgtttgttggatgatcagttgtttgaaccgcttaccttttttataggcgcatataaaagtgatttggtggtcctggagtattcatttggtcatgtattctatattttggaaacttaagttttaatggattaatctagtggaggatgtagtcaagaattttcttttgttggttcctaagagatttcttggctcgcaagttgcaacgcgaattgggctctcatgtattttactattttagaaagcttttaattatcacagatatagtagccgaacagattggatatagctgtgtattcgagacatctgtttgttatcttatacagggcatgctccgccactgaagtcaaaatgtagggagatctgttaagttgtataccatattaggcttagtttattcttttatctttctccatttgttctgctaggaactgagctatcccatggcatcaccacaagaatccaattccttgtgcttgaagcgcaagcttgttgatgactgcctgtcaaaagagtgcaagtctcgtcgcatcaaaactgagaagggaccatcatctgattcatctgccaagcgctgcaaatgctgttgcactcgacctaaccttgccagtgattgtgtcaattacctaaaaagtggagtgcccagccgtgttatgttttacaaacagggttcttggcacaattttcctgagcagataatgaagtctctcattgaagaatttagaagcaataaatctagtgttgttgctgtgatggacgatgagcctgttcttgttgatttcttgtcgatgaccctggtcaacctaaaatctagaaagcagcggtctgtggcatggtttgatgacactgggaagtgcttttatccttctctattctttgatgaggaagctgatgaagtggctaaagtaggcggtgattttgagggcgccacacagggaataatgttggataaggttgcaaattctccaccagaagtggtgaagcaagttgtccttgaatctagtcctccagttccacagaagcctgccactgcagacatattacgcaaaaagatcgcatctgtggaacgaggcagtgaaggctttctttttgcgcaggaccttttcctctctggcatgggtccatttgcaacgccaaataatatactgcacatccaccgctactctccgaatgatatcactgcacagtgtagacttcaagcttttgaaaaacaaatgatgtccaccaaggaagaacgtggtgatgcaaatgtaaggtatggatggctgggatctaggaagaatgacatagttaggatcctaattaatggttttggtaacaatggaaaacctgctgagaaggcaggcttgagtgctggtgtttatctttcaccagaagaccgagcattttccaggtactttttataaacttaaaaaaatgtattgaccattccattttaattgtttatgtatttacattatatcttgcttgacagtgttggtctttgtgatgttgacgaaaaaggagtgcaatatatgttgctctgccggttgattttggggaacatggaggctgtcatgcctggatcacaagattcttttccaagcagtgacatatatgattctggtgttgatgattgctcaaatccaaagtgctacgtcatgtggccatctcatcttagcacccatattcgtttagaatatcttgttagtttcaggctttcctcgaaagttcgaagtaagatgataaataatagttaaaggtttttatcatgttttgttgatataggtggagtgatatattttttggttcacttgttttcagattatttacttggtttgaagggtttatggtttcacccatcaccaaaggaagttgcggtggatatttctactcttgtacctgtgaggcaacctagttttcttcgtttcttcttttccattgacactctggttttccagctagatgtgcatgtactgctaacagtggtagaatagaagtctgatctgagagcaatccaatttcactacagattgttcctcccttctttaaatgacaaatgatcttggctttgttgtacatttttatgcagataatgagtggaaatgctgagggaccaacttccccttggatatccttcagagttctttttgccatgattcaagaaaatatatcatcggtagcaagggaattgctcttccatcattatgaagagctgaaggtactaactaaccaacaagttacactgtgtttatttattagcattggctgtgtggttggttggtgtgatgggtactaaaatgttttaattgtttatttgacaggaaaacaaaataactcgtgaggagatggtaaagcaaatgataatattagttggagagaagttgcttttggaaaccttgaagaggcttcattactgtgtaagtcggctgtcccctgctgttatccttcgaaacaatttctggtgacatatgcttgttttctcagttcacatccatactaaggatacttttaatgctcatatacttttaatacattatggacaagtttgcatacgacaacaggcacaattttaggaagtttttgttcaggtgttgcaatttttataagatggtttattatcacattgtttatcaaatcacacatatttgtcaaataaagaaatatctgctaaattttttaaacgagtaataagaaaattggtaggggctaggaaactagcaaggccttgaaaaaaatatagggaactctcaaagcagccaaacatgcctaaaacaggcacaggccttttgaattcatgtttggataaattatttggaaattttcctcacttgtttcaggcatcctcttatttttactgtaccagtttatctgtactcatatttcacatagctgttgctgcatctgtactggtgtgattaactgcacctttcttctgatgccattgtgtccttggcttctgttgcagccatcattatggtataaatctgctggcaaaatagcatcttctgatcctgcgaggacagctgcagaagacaggtctttggatcaaactgggaattgttcattaattgttagtgttgcgcatggtgattctcatgccccaaatgcagtagctgaaaacagcaccagtctttgcaccaaaggatgtgatactcctgcaacaggcatgatttccaagggctatgattctctggcaccaaaaggtgtgccggaaacttctacttctgtcggccccgtacatggggcttctccaagtgtggaacccaaagtgagggattctcctatacaaaccgttttatcaggaaacattgctactgattgtgccaaaaggcaagatccattggtatcaagagtggcacctgtagctcataatggccttttaaggatgccatctggaaaatcagcatctctcgcagcgcaagtttgcaattctgttagaccaagcacaggaccttcaggtcgtgcttctacagaaccaaataatgcctctaaaagttgtgggatttttgctccgggtatcaggccaaagggtggtgaatctcttgttcctagtttggcattaggaaattccaaatatgcaggtgtagaaggtctcaattctgcaccaagagcgacacctccgggtattaggccaaagggcggtgaatctcttgttcatggtttggcattgggaaattccaaatgtgcaggagcagaaggtatcaattctgcaccaagagtgactccactgggtatcaggccaaagggcggtgaatctattgctcctagtttggcattgggaaattccaaatgtgcaggtgcagaaggtatcaattctgcaccaagagtgactcctccgggtatcaggccaaagggcggtgaatctattgctcctagtttggcactggggaattccaaatgtgcaggtgcagaaggtctcaattctgcaccaagagtgacacctcccggtatcaggccaaagggcggtgaatcttttgttcctagtttggcattgggaaattccaaatgtgcaggtgcagaaggtctcaattctgcaccaagagtgacacctaaagacaaggagtttctttcattgagtatttcatcacaacaaagcccagttcttaattcaggtaaaggccatgatgggacatcaggtgccgcacgtccagtacatgcaccaggtttaccctcttccaactgcagatcatctgtagcacttcaagggttattcttgtgtacaaaatgtagataatcaatgctttcattaacgtgcagggcatggaaatcctaaagctttggccactgaggcccgtggttctctatctctgagtattgcaccgaatgtccatgaccctccagcatcaagtaaggagcctaaggacgatgcatctccaatagcaggcatggtctcagaaagccagcactctcaagcacctaatgcagtcaccaaggggtataatgctcccacacccagtacggtgcttggaaactcttgccatggaacaacattgttggtaacatcacttgtttttttgctaactctcatgcttccttggtgactgcagtacctaaggagtcaaaaggccagcatttacagagtggagtgcacagtcaatcgtctgggccagacgatgctagcagcagcaatgtcgctcgggcagctgataccatcgtcgccctatcaactcttcgagagaagggcaggtagatgttgcagccccttgtgctgatcgctctttgctttttgctgggccgttctctagtgctgtacatgtgatgtgaatgttatacaccgtcctgcccaaaaagcgtttaccgtcgtaccatggtccatgggtcggtccgtttaacttataggtggtgtaaaccggttggatggattcgtttgttgtaggttacctgtcaccttgtcgacttgaacgtgaatcgttgcacatccctggcagtaaactttgtcatggctggt</dnaseqindica> 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| External Link(s) |
