Os04g0673000

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Revision as of 11:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0673000| Description = Homeodomain-like containing protein| Version = NM_001060765.1 GI:115461259 GeneID:4337371| Length = 6530 bp| Defini...")
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Gene Name

Os04g0673000

Description

Homeodomain-like containing protein

Version

NM_001060765.1 GI:115461259 GeneID:4337371

Length

6530 bp

Definition

Oryza sativa Japonica Group Os04g0673000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:34745659..34752188

Sequence Coding Region

34745891..34746005,34746304..34746365,34746806..34746897,34747955..34748081,34748168..34748230
,34750418..34750517,34750987..34751017,34751138..34751330

Expression

GEO Profiles:Os04g0673000

Genome Context

<gbrowseImage1> name=NC_008397:34745659..34752188 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:34745659..34752188 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgattccagcatgggattccatcaggggatcacggcctcgatgtacaaccatcacatgctctccttccaatctaacagcgacttgggcggtggcgccggcgctgcggccggtatggtgatggccccgaggagcatgaacgggactagtagcagcgctgggctgttcgtctctccgaacaccggtgagctgaacacactgaaggaagggcttgtgagatatgctcgcgaaccgaatatcatgaagtacataaaaatagcagctatgctacccaacaggactgtcagggatgttgcattgcggtgttggtgggctacaagtaaagatagaaggaagaaacctgatggattttatacagggaaaaagataagagacatgaagccaatccaggacaagatggttgcatctgcctccatggctaattttcacctggcacctgcaaacactgtgacccctttctcaatatcgatgcaacatacaaatcagcaatgtcaggttcctaaggaagaagttcctgtcgtggatagtgcaacacagcatctcctggaagaaaacaatcatttactcaaccaaatcgccacaaatatcgaaacattcaagacgggagagaacacggatctcttttttcggacaaacaacaacttcaaaaatattttaagcagaatgagcgagacgcctggtatcatgggccagatgccccaattgccagtgcaagtaaacgaagaccatctgagttcacttcttcagctggacagaatggtaagaggggacccgtaa</cdnaseq>

Protein Sequence

<aaseq>MAADSSMGFHQGITASMYNHHMLSFQSNSDLGGGAGAAAGMVMA PRSMNGTSSSAGLFVSPNTGELNTLKEGLVRYAREPNIMKYIKIAAMLPNRTVRDVAL RCWWATSKDRRKKPDGFYTGKKIRDMKPIQDKMVASASMANFHLAPANTVTPFSISMQ HTNQQCQVPKEEVPVVDSATQHLLEENNHLLNQIATNIETFKTGENTDLFFRTNNNFK NILSRMSETPGIMGQMPQLPVQVNEDHLSSLLQLDRMVRGDP</aaseq>

Gene Sequence

<dnaseqindica>6184..6298#5824..5885#5292..5383#4108..4234#3959..4021#1672..1771#1172..1202#859..1051#gtttagatcaaacgggttcgtaaaaaaaaagttttattctcgggttcgttgggttttatctatataggcggcgagcgagaccatctcattcagttttattccgcgcgcctcctaaatcgcgcttaatccggcgcatcctgattcagagagtggtttggattcgttggattcgaggtgaacgaacagggcgtggaattttcgaggactctctcctctcgcagaatcccgcgcgcctcctgattcggagagcggtttggatttggattcgaggcgaggaattttcgaggactttggcagcggcggcgggggctggtgagcttctgctgcggcttggagtctgcccccaccattgcgtggggaggtggaggtggaggcggtggtggcggcgggggcggcggaggacgatccttccgcggcttcggtggcaggtgagttcgccgggttgggttcggatttcgtctggatttgtgggggactcagttatgggtggtggttgcttgcggtggttgtggtggcttggtcgtgttgaggtgtggggtctccttcctggtcatctcccagggcctctcgatcggatcctcctcgggagtcgggaatgcgaagctgagtgtgacgcgtgcacgactctcgagggaggaattcccttggtgatcgtgctggagttcgtgggattcgtcgagcttttcgatcctctgctgaaaaaaaaaagtcgttctctgtcagttactcgtttcgtttcaattgggtgagatttttttcctggctcgatttgtgcaggtttgatccaaattgagcgccctgaggatttggggcgtgtttatggaggattagatcgagaattttggttgtttctgtgagatggccgccgattccagcatgggattccatcaggggatcacggcctcgatgtacaaccatcacatgctctccttccaatctaacagcgacttgggcggtggcgccggcgctgcggccggtatggtgatggccccgaggagcatgaacgggactagtagcagcgctgggctgttcgtctctccgaacaccggtgtgctgggcaacgcatcggtggccggcccgtcgaggagctcgtcgggggatgcgttcagtagcacggtggcgcccaagtacaagttcgtcactggttcgccttcagattggaatgaccgtgagctgaacacactgaaggaagggcttgtgaggtagcaaatccctattccccttttgctttctgaattgctattgcctgtgctgtgctagtgtgacttgttgcttgtgcggttgtggctgatggaattttggttgtgcaacaagccgttttttctcccctcttatgtttaatggagcatcaatccggaacaggaaatctggagctggattcattcaattgaaccctgttaccttttgagttgagagcaatatcaatgaatgttctatagcacttttgtgattatttagcgtacttgtagaatcattgttcttaaccatagaacgtctttttcaccgggccagcgaaaccataaaacgtcttggtagccacacttgagtaccttacgactatatgtttgcactatagctgattaataaagtcactatccggtttgtcaatcttatctggggaccagaccatttcttttcagttcctcataatttcttcaatcttactggcagatatgctcgcgaaccgaatatcatgaagtacataaaaatagcagctatgctacccaacaggactgtcagggatgttgcattgcggtgttggtgggctacagttaagttactcttttcaaatgtcacattatctcttctgtttccttgttaacatatatgttgattctggtcatgtgcaaattgggtagaagaacttcttaacttcgctaaaaattaagtcagatgtacactgaagaccaaaattgacaccacctagcaccctcaccacattgctcttttgactttttgatagaggtgcttaagcgcttcatatatttaattttactttttataatcctttatttccttttgtgactgatgtgataatttgccatctgccaattacattctagatgtaggctgactttagtcccaaactttttcttcaaacttccaacttttccatcacatcaaaacttccctacacacacaaacttccaacttttccgtcatatcattccaatttcaatcaaactttcaattttggcgtgaactaaacacacccgtattgtaacttggagtatacagcttttaaagttctagcaaacgatcaattccaacaggcatatcaagtatacacagcatttaaggccataataatgacctgccctggctgaaatagacactttgtttgtttgttttattcttaatacaaagctgttcattgtggtttcagactggaaatagatactttgttctgagagatcccctcataatttccccaaaacgtaaccatgtgtgaatagattttgagtaagcagggttgcagccacgagtgagtcttcccttgttattgtgtagccagaatgccgcaaaacttccatgcctaagcgaactgttgagagtacgtttcgatttctgactgtgttagcctggaagtgcttgtcccaaccttgtttctgagcatgaacgcccgcaagccaacatgttagttgaagcatcagggcgattagcagcatgatatcaaaacgctctgagctgctcgttcggctatggcgtaggcctagtccgtaggcaggacttttcaagtctcggaaggtttcttcaatctgcattcgcttcgaatagatattaacaagttgtttgggtgttcgaatttcaacaggtaagttagttgctagaatccatggctcctttgccgacgctgagtagattttaggtgacgggtggtgacaatgagtccgtgtcgagcgctgattttttcggcctttagagcgagatttatacaatagaatttggcatgagattggattgcttttagtcagcctcttatagcctaaagtctttgagtgactagatgacatatcatgtaagttgctgataggtttccagttttccgctcctaggtctgcatattgtacttttcctcttactcgacttaaccagtaccaacccagcttctcaacggatttataccatggcactttaaagccagcatcactgacaatgagcggtgtggtgttactcggtagaatgctcgcaaggtcggctagaaattggtcatgagctttctttgaacattgctctgaaagcgggaacgctttctcataaagagtaacagaacgaccgtgtagtgcgactgaagctcgcaataccataagccgtttttgctcacggatatcagaccagtcaacaagtacaatgggcatcgtattgcccgaacagataaagctagcatgccaacggtatacagcgagtcgctctttgtggaggtgacgattacctaacaatcggtcgattcgtttgatgttatgttttgttctcgctttggttggcaggttacggccaagttcggtaagagtgagagttttacagtcaagtaaggcgtggcaagccaacgttaagctgttgagtcgttttaagtgtaattcggggcagaattggtaaagagagtcgtgtaaaatatcgagttcgcacattttgttgtctgattattgatttttggcgaaaccatttgatcatatgacaagatgtgtatctaccttaacttaatgattttgataaaaatcattaggggattcatcagtactttgtttgtttactcccgttaataccaaaatgtacaaagcttttgtgcctcccgtaaaatttggaaatagccaccatgatgcatgtagttgatatttagctgttgctgcatgcattgttttctcttacattgctcctccaacaggttatttgtttactggcttgcattagtatagcagctcatgcactgtattctgctcacattcgtttactgttacagagtaaagatagaaggaagaaacctgatggattttatacagggaaaaagataagagacatgaaggtagttttctatttgtaacttgtttggtgtacctcatttcttttgcttgtatcagccatgttcttttgagtttaatttctcaacagccaatccaggacaagatggttgcatctgcctccatggctaattttcacctggcacctgcaaacactgtgacccctttctcaatatcgatgcaacatacaaatcagcaatgtcaggttcctaaggaaggcaagaccacagcaataacattaacatctatatgtttgctttcttctgttcagctgttttagttcatctttattctgtactacaagtttgaggtttgacccacagtgtgttctaaaattgtgaaaactttaggtctgttagatagtgaggtaaacatcaaaacttaagacccatgttaaaaaaacaacttgagactcagtgtttccctctgtttaatttcatcatagaaacgtggttcacacacttacattgttgggctaacattaagtgtgtgtgtgtgtatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatacatatacataccatatgagtagattttaatgctcttccaagaattcctaacaaactcaaattgcttgtgttcttgaggctgcttactacatttgtagtcagtagaagcatcctctggaagcaaacttcagatgcctttatgtggtgcgcatgctgtattaagattgtgtcacctatagatccccgtgcaaatacaagaaagatctaggacaaaacacaagcaagtagcagtgtttccaatttccatgctaagcaatcttttatatatgattatgaatccttggtaacatctttagaaactgtttttttcttgtgaaataccttggaaaatagcaattgttagctttactattatttcgtgatacaagcttactgatatcatcggatgctagaaatccacaactgcaaaagaatgggggttgctgtatttgatgatcatgtagttttgtccgtttataggtctatgatggaggaaaggttcatacatcccatagtaaaggaaaagggtgttgcgttgcaccctcctgtttatattctttgtgtttgcctttcatcctttcattatctttcaccgtaaactttaggaacataatgtaataaaacaccttgggtttcattatcattttagatacctacaactatctcatgcaatgcaactgcatgcatcttatgatgtcttatttctcccaaaacactcatctggttccattatgtagaagttcctgtcgtggatagtgcaacacagcatctcctggaagaaaacaatcatttactcaaccaaatcgccacaaatatcgaaacattcaaggtttgtatgtccataaacttctcgcattttaattctaaagttgttgcttttgaagttaatgagtgcccttacgttagaaaaaaaagttaatgagtgccggtcaaggagcatatgatgcttgccaaacatcttaatttcattacaatagttggtttaaaagtcggtttatctattgaaaatgctgtcgtaatatgtgatcaactagtccttgccctgaaaatatatgcccctttaactgttatatttacggggcatcgtgtgaaaccaataatgtcatctgccatcaattactagatatggggaaacacttaatataagttggaacctgtcactctcaggctttatgaatattaaaaataaggcaggacaactggacaggtgtgggttaccatttgttttctttttaattttattatgcctgaatcctgagtttcttgcagacgggagagaacacggatctcttttttcggacaaacaacaacttcaaaaatattttaagcaggtaaagcgtcatttatgtgcccgccatgtatcttgttctttatatattgctttgaggacgatttttactcttcatgtccaaacactgccatgccatccattattatgttccaaattagataggagcccctagttaactataccatccattatcatgttccattatcattatcaaagcctgtaccatcttttatcattttgggattgcttcctgttaactggtgtttcttgttctaggcagtattcaatattcatgttcgtagaaacaaaatataatattttttccttttgtgctgcagaatgagcgagacgcctggtatcatgggccagatgccccaattgccagtgcaagtaaacgaagaccatctgagttcacttcttcagctggacagaatggtaagaggggacccgtaatcacaagagattcaaacatgtacgcagtatttttcagcacgttcatcaccatttacttcattttcttccctttgctcttaaagtagtcgatacataggatgttaacagcaggatcttgtaatctacatgccttaaccacaatgatcgacacccactgctaggttccttcgtatggcgtaacgcaaacctctcatatgaagcaagaaccgcgaagctagtataaacatacacg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0673000, RefSeq:Os04g0673000