Os10g0145000

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Revision as of 08:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0145000| Description = Cyclin-like F-box domain containing protein| Version = NM_001070689.1 GI:115481121 GeneID:4348096| Length = 2574 bp|...")
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Gene Name

Os10g0145000

Description

Cyclin-like F-box domain containing protein

Version

NM_001070689.1 GI:115481121 GeneID:4348096

Length

2574 bp

Definition

Oryza sativa Japonica Group Os10g0145000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:2710745..2713318

Sequence Coding Region

2711113..2711177,2712134..2713271

Expression

GEO Profiles:Os10g0145000

Genome Context

<gbrowseImage1> name=NC_008403:2710745..2713318 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:2710745..2713318 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgatgtcaccggcggccactcctcccctccggcggcggcggcggagaccttgcccgacgacgtcctcgccgagatcctcctccgcctcccgccccacccttccttcctctcctcggcgtccctcgtctccaagcgctggctccgccacacccgcaaccctagcttcctccgccgcttccgcgagttccaccgcaccgcccccgtgctcggcttcttcctcaactcctcgcatggcgccctcttcttccccaccgacgcgcccctctgccgcatcgccgaccaggtcgcctccctccgcaggaacacgggcgatggcttgtggtggctcgtcggctgccgccacggccgcgtcctcctccgcagctgcgactgggccaacctgctcgtctgggaccccatgaccgaggggttcgtctgcttccccgcccccatccagatggtccaagccgacgccgaccgcgacgccgccgtgttctgcgctgcctccgccggcgacgaggaccgccgctccggcgccttcaacgtcgccgtcgtgttcgtcagcggcgaccacgtgttcggctgcatgttctcctcggcgatcggcgcctggggcgacgtgatctcgacgccggtgactttacctctgctgatgatctacgacgagcccgctgcccttgctggggaagccctgtactggattgttaatggcagcagcttgctcgagttcaattgcggcagccaaagtctagctctgatctcgcggccatcggatatgcccgcaacccacaggtggaacatccgtcctgtgagtttggaggacgatttgcttggcctcgcctttttcaacgatttctgcctgcatctgtgggtgcgggaggttgccgatgatggcgcgacgaactgggttccacgcaagtccgttgagatggacaagctcctttcgctgccagtggcgacggaggacagtcggcgccgtatcgtgcctgcttggatatgtgggttctctggggatggaaatgtggtgtttattgggacccctgctggcattttcttggttgagcttgacacgttgaagttcaagaaggtgactgatggttccctactcatcaagactgttcatccctatgagagcttttattatgttccaaatgaaaaaggaggaaaacaggagagtgctatagtggggaaccaggtttctgaggcaggtggcaagtga</cdnaseq>

Protein Sequence

<aaseq>MADVTGGHSSPPAAAAETLPDDVLAEILLRLPPHPSFLSSASLV SKRWLRHTRNPSFLRRFREFHRTAPVLGFFLNSSHGALFFPTDAPLCRIADQVASLRR NTGDGLWWLVGCRHGRVLLRSCDWANLLVWDPMTEGFVCFPAPIQMVQADADRDAAVF CAASAGDEDRRSGAFNVAVVFVSGDHVFGCMFSSAIGAWGDVISTPVTLPLLMIYDEP AALAGEALYWIVNGSSLLEFNCGSQSLALISRPSDMPATHRWNIRPVSLEDDLLGLAF FNDFCLHLWVREVADDGATNWVPRKSVEMDKLLSLPVATEDSRRRIVPAWICGFSGDG NVVFIGTPAGIFLVELDTLKFKKVTDGSLLIKTVHPYESFYYVPNEKGGKQESAIVGN QVSEAGGK</aaseq>

Gene Sequence

<dnaseqindica>2142..2206#48..1185#agtgcacaaaattcaatcccccgtttctctcatccccagatctgacgatggccgatgtcaccggcggccactcctcccctccggcggcggcggcggagaccttgcccgacgacgtcctcgccgagatcctcctccgcctcccgccccacccttccttcctctcctcggcgtccctcgtctccaagcgctggctccgccacacccgcaaccctagcttcctccgccgcttccgcgagttccaccgcaccgcccccgtgctcggcttcttcctcaactcctcgcatggcgccctcttcttccccaccgacgcgcccctctgccgcatcgccgaccaggtcgcctccctccgcaggaacacgggcgatggcttgtggtggctcgtcggctgccgccacggccgcgtcctcctccgcagctgcgactgggccaacctgctcgtctgggaccccatgaccgaggggttcgtctgcttccccgcccccatccagatggtccaagccgacgccgaccgcgacgccgccgtgttctgcgctgcctccgccggcgacgaggaccgccgctccggcgccttcaacgtcgccgtcgtgttcgtcagcggcgaccacgtgttcggctgcatgttctcctcggcgatcggcgcctggggcgacgtgatctcgacgccggtgactttacctctgctgatgatctacgacgagcccgctgcccttgctggggaagccctgtactggattgttaatggcagcagcttgctcgagttcaattgcggcagccaaagtctagctctgatctcgcggccatcggatatgcccgcaacccacaggtggaacatccgtcctgtgagtttggaggacgatttgcttggcctcgcctttttcaacgatttctgcctgcatctgtgggtgcgggaggttgccgatgatggcgcgacgaactgggttccacgcaagtccgttgagatggacaagctcctttcgctgccagtggcgacggaggacagtcggcgccgtatcgtgcctgcttggatatgtgggttctctggggatggaaatgtggtgtttattgggacccctgctggcattttcttggttgagcttgacacgttgaagttcaagaaggtgactgatggttccctactcatcaagactgttcatccctatgagagcttttattatgttccaaatggtatgagcaactatccctttgtccttttctgtcaagtagtctttaaataatgaaaagtcttacaatgtttactctgttggtgctgaacccaatactacgtagtacatatcctgttccagttcaggagcactagcaattaatatcaaatagagcaacacatgccaagtcacttttattttatgttttattgatctgatgttcagtagtcatcgttaacactaaggttgaaagtgggttaatggggatatctccttgcgcgattttaataatacctcatgtatcgtttgtggataccttttccacttaatgccacattatgtttaagcaaaagtatgacaagtattgatttgtgtctcttccacttctatttatactagtttttaaaatgccttttccacttaatgccacatttatgtgtaagcaaaagtatgacaaatattgattggtatctgttctacttatatttatagtagtaatgaacttgtttgattgaaaaaaaaaatacagttgtaccttttctttacggtgagctcattctataaagatcccactgaaaattaaaatttaacttttgttgtagttgttaataaaaaatacggttctgacaatttgattaatacggctggaaaaaagggagatagcaaacgccttttctgccagggttttgaaaagatgaacacttattcattaagtgccccttagcttactttgtttggaatgttgttagttgtacttttggtgttggtccagttcttagtgtttatcatctttttggaccctggctaaacaagtttaagaagaaactttagtcactcattttgattggaattgcttttgtatgctggtatttattgaaagctagaaattcagcctgtttcaaagctaaattatctaaagatcctacagatataatatattttgtttgcttatggatgttatcttgggctctaatgcagaaaaaggaggaaaacaggagagtgctatagtggggaaccaggtttctgaggcaggtggcaagtgagatcttccgcgccaagttcagatggagactgtgctcaggacagttggaaggatgaacacaaaggaggatgtcactatatgttgggagaattcaccaggtcttttctagttttaagttctgtttagctgatcatcactttctggatgctatttctcggtacatgttggttgtagtcttgtgctttgaaactcaacttttgttgtaaaccagcggttggtatacatggtaggatggcaccatgtgaacaacctggctgatgcttgacctgtttgctgctgaaaggtggtgtgggcgttatgaaccttgtagtctgtttgactgtttccttcagtggtcggtttgaagacaaataaaaaacaggttttcat</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0145000, RefSeq:Os10g0145000