Os04g0674600

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Revision as of 11:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0674600| Description = Oligopeptide transporter OPT superfamily protein| Version = NM_001060776.1 GI:115461281 GeneID:4337382| Length = 374...")
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Gene Name

Os04g0674600

Description

Oligopeptide transporter OPT superfamily protein

Version

NM_001060776.1 GI:115461281 GeneID:4337382

Length

3743 bp

Definition

Oryza sativa Japonica Group Os04g0674600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:34840200..34843942

Sequence Coding Region

34840441..34841556,34841628..34841817,34842064..34842198,34842305..34842402,34842523..34842686
,34843518..34843941

Expression

GEO Profiles:Os04g0674600

Genome Context

<gbrowseImage1> name=NC_008397:34840200..34843942 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:34840200..34843942 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cctccacacctcgcaaccgcgatcgatcgagagagagagcgagagcgagagctcaattcgcgggccatggcgaggagcgggagggagcgtagagatcaggaggaggaggcggcggtggtgtcggtggagcgggtgttcgaggggagggtggtgccggggtggaaggagcaggtgacgctgcgggcgctggcggtgagcgcgctgctgggcgccatgttcagcgtgatcgtgatgaagctgaacctgacgacggggatcatcccctcgctcaacgtctccgcggggctcctcggcttcttcctcctcacgtcgtggaccaagctcctcgacaaggccggcgtcgccagcgtccgccccttcacccgccaggagaacaccgtcgtccagacctgcgtcgtcgcctgctccggcatcgccttcagcgggggttttggcagctacatattcgcgatgagcgacaggatcagcgaccagtcaggcgaggccagggacgagcacaacatcaagaaccccagcttgggctggatgattggattcctcttcattgtcagcttcctgggcctcttctcagttgtgccactcaggaagataatgatcatcgattacaagctcatatacccgagtggcactgcaaccgcacatctcatcaacagcttccacactccccagggtgcaaagcttgccaagatgcaggtcaaaatgctgggcaaattcttcgtgatgagcttctcctggggcttcttccagtggttctacaccggcggcgacggttgcgggttcatgtcgttcccgacgctgggtctcgaggcctacagaaacaagttcttcttcgatttctctgcgacgtacgtcggcgtcgggatgatctgcccttacctcgtcaacatctccgtgctcctcggaggcgtcatgtcgtggggaatcatgtggcctctcatcgagcacaagaagggtgactggtatcctgctgacctcaaacccagcagcctccgcggcatcgtcggctaccgggtgttcatctccatttcactcatcctcggcgacgggctgtacaactttctgaaggtgatgacaagaaccacaacggcgctggtgatgcaggtgcgcgcgatgatgtctgagccgacgctgccggtctccggcggcggcgggcagacgccggaggagacgttcgacgacaagcggcggacggagctgttcctcaaggaccagatcccgaactggctggcgctgagcgcgtacgtggtgatcgcggtggtgtcgatcgcgacggtgccccgcatcttccaccagctgaggtggtaccacgtcgcggtgtcgtacgtggtggcgccggtgctggcgttctgcaacgcgtacgggtgcgggctgacggactggtcgctggcgacgacgtacggcaagctggccatcttcacggtgggggcgtgggcggacgcgtcggacggcggcatcatcgcggggctggcggcgtgcggcgtgatgatcgggatcgtgtcgacggcgtcggacctgacgcaggacttcaagaccgggtacatgacgctggcgtcgccgcggtccatgttcgtgagccaggtgatcggcaccgccatggggtgcgtgatcgcgccgtcggtgttctggctcttctacaaggcgttccacgacatcgggatgccggggtcggagtacccgtcgccgaacgcgctggtgtaccggaacatggccatcctcggggtgcagggcctcggctcgctgcccaagcactgcctcgacctctgcatcggcttcttcgtcgccgccatcgccgtcaacctcgccagggacctcgcggcgcccaaggtggcgaggttcctcccgctgccgatggccatggcgatccccttctacctcggcccctacttcggcatcgacatgtgcatcggcagcctcatccgcttcgtctgggaccgcctcgacggcgccagggccaaggcgttcgctccccccgtcgcgtcgggcctcatctgcggcgacggcatctggacgctgccgcagtcggtgctcgccctcgccggtgtcaagcctcccatctgcatgaaattcctctcccggaccaccaacatcaaggtcgacgcgttcatcgccaagctcccctcctcctag</cdnaseq>

Protein Sequence

<aaseq>PPHLATAIDRERERERELNSRAMARSGRERRDQEEEAAVVSVER VFEGRVVPGWKEQVTLRALAVSALLGAMFSVIVMKLNLTTGIIPSLNVSAGLLGFFLL TSWTKLLDKAGVASVRPFTRQENTVVQTCVVACSGIAFSGGFGSYIFAMSDRISDQSG EARDEHNIKNPSLGWMIGFLFIVSFLGLFSVVPLRKIMIIDYKLIYPSGTATAHLINS FHTPQGAKLAKMQVKMLGKFFVMSFSWGFFQWFYTGGDGCGFMSFPTLGLEAYRNKFF FDFSATYVGVGMICPYLVNISVLLGGVMSWGIMWPLIEHKKGDWYPADLKPSSLRGIV GYRVFISISLILGDGLYNFLKVMTRTTTALVMQVRAMMSEPTLPVSGGGGQTPEETFD DKRRTELFLKDQIPNWLALSAYVVIAVVSIATVPRIFHQLRWYHVAVSYVVAPVLAFC NAYGCGLTDWSLATTYGKLAIFTVGAWADASDGGIIAGLAACGVMIGIVSTASDLTQD FKTGYMTLASPRSMFVSQVIGTAMGCVIAPSVFWLFYKAFHDIGMPGSEYPSPNALVY RNMAILGVQGLGSLPKHCLDLCIGFFVAAIAVNLARDLAAPKVARFLPLPMAMAIPFY LGPYFGIDMCIGSLIRFVWDRLDGARAKAFAPPVASGLICGDGIWTLPQSVLALAGVK PPICMKFLSRTTNIKVDAFIAKLPSS</aaseq>

Gene Sequence

<dnaseqindica>2387..3502#2126..2315#1745..1879#1541..1638#1257..1420#2..425#gcctccacacctcgcaaccgcgatcgatcgagagagagagcgagagcgagagctcaattcgcgggccatggcgaggagcgggagggagcgtagagatcaggaggaggaggcggcggtggtgtcggtggagcgggtgttcgaggggagggtggtgccggggtggaaggagcaggtgacgctgcgggcgctggcggtgagcgcgctgctgggcgccatgttcagcgtgatcgtgatgaagctgaacctgacgacggggatcatcccctcgctcaacgtctccgcggggctcctcggcttcttcctcctcacgtcgtggaccaagctcctcgacaaggccggcgtcgccagcgtccgccccttcacccgccaggagaacaccgtcgtccagacctgcgtcgtcgcctgctccggcatcgccttcagcggtacggtttccccgctgccattcttcgcactcgccgcggatcggatcgctcgctcgctgcacgattcagtgattgcgcgatgcaaattttgcgtcgaatcgaatggcgacggatcacttgtttgggccgtaaattaggcctcgatggcctcctttttggatgtatatcaaggcccacaggccacaattccatttcggtgtgtagcatgaattttgatcttaggttttttctggattctttttcttgttctgtgcttgcctttcttaaagttcaggtgtttgaatttccaaccaaaatgatgtttttagcacaccattggaaactggcctattgagcatacttcctccgtctaaaaaaagactaatgtccagattcattatattacgaaatgtcttatctaatattaggttgttttttggtgggacgaagggagtacacaacataggtgtacttctaattgccacgtaggacaaatacggtgcttagcaaaaaaaaatgattgctgcatttaaatacagaggataatgtagccaactagccatggcccatgggaaagcacctacaaagaaatgatttgattggagactcattcctcgtgttgtttcccctagcacttggtaatttgcatccttactaacaaaaaaaaacttatctttctttaagcaccttgttactataagcatacatgttccgttcttcacgtcctagacttttatcactgctctccctgttatcagtagtacatccacagagagcactgtgcactacgttctctgcttggtgtcagggtggtgatggtttcagatgctgatctatgcactggtggtacagggggttttggcagctacatattcgcgatgagcgacaggatcagcgaccagtcaggcgaggccagggacgagcacaacatcaagaaccccagcttgggctggatgattggattcctcttcattgtcagcttcctgggcctcttctcagttgtgccactcaggaaggtacttagtacatttcatcagctcagctgttacagtttctcctaaaattcagagatatatgatttctttgaaggacatagttaaattaattgaaccatgatgttaatttttctctgtcagataatgatcatcgattacaagctcatatacccgagtggcactgcaaccgcacatctcatcaacagcttccacactccccagggtgcaaagcttgccaagtacggtttttttttcagataagaaagtttgctaaagatatgtacatgtggtgaatacagagaacaaataagactcttgtctgaattctgaatcattttcctgcaggatgcaggtcaaaatgctgggcaaattcttcgtgatgagcttctcctggggcttcttccagtggttctacaccggcggcgacggttgcgggttcatgtcgttcccgacgctgggtctcgaggcctacagaaacaagtattgtctttgtttttttatacacgacgtcgttaatatttcgtataatacattatttaaaaatataagttaaagttacatttctttgatgataaaacaagtaataataaaataaacaataataatacaagtattttgaataaaagaaatagacaaatgtcatgctagcttgaaacatacagatgctcgccacactggacagtcaacaacagttaactgaattcttcagttggtttcttgctgcaggttcttcttcgatttctctgcgacgtacgtcggcgtcgggatgatctgcccttacctcgtcaacatctccgtgctcctcggaggcgtcatgtcgtggggaatcatgtggcctctcatcgagcacaagaagggtgactggtatcctgctgacctcaaacccagcagcctccgcggcatcgtcggctaccgggtagaacgagcttcttgcaaatgatcatctgttgcatgatcaatggagtaattgtgattcgatcgatgcaggtgttcatctccatttcactcatcctcggcgacgggctgtacaactttctgaaggtgatgacaagaaccacaacggcgctggtgatgcaggtgcgcgcgatgatgtctgagccgacgctgccggtctccggcggcggcgggcagacgccggaggagacgttcgacgacaagcggcggacggagctgttcctcaaggaccagatcccgaactggctggcgctgagcgcgtacgtggtgatcgcggtggtgtcgatcgcgacggtgccccgcatcttccaccagctgaggtggtaccacgtcgcggtgtcgtacgtggtggcgccggtgctggcgttctgcaacgcgtacgggtgcgggctgacggactggtcgctggcgacgacgtacggcaagctggccatcttcacggtgggggcgtgggcggacgcgtcggacggcggcatcatcgcggggctggcggcgtgcggcgtgatgatcgggatcgtgtcgacggcgtcggacctgacgcaggacttcaagaccgggtacatgacgctggcgtcgccgcggtccatgttcgtgagccaggtgatcggcaccgccatggggtgcgtgatcgcgccgtcggtgttctggctcttctacaaggcgttccacgacatcgggatgccggggtcggagtacccgtcgccgaacgcgctggtgtaccggaacatggccatcctcggggtgcagggcctcggctcgctgcccaagcactgcctcgacctctgcatcggcttcttcgtcgccgccatcgccgtcaacctcgccagggacctcgcggcgcccaaggtggcgaggttcctcccgctgccgatggccatggcgatccccttctacctcggcccctacttcggcatcgacatgtgcatcggcagcctcatccgcttcgtctgggaccgcctcgacggcgccagggccaaggcgttcgctccccccgtcgcgtcgggcctcatctgcggcgacggcatctggacgctgccgcagtcggtgctcgccctcgccggtgtcaagcctcccatctgcatgaaattcctctcccggaccaccaacatcaaggtcgacgcgttcatcgccaagctcccctcctcctagctaccatgcagctgatcgacgagctagccatctatctagctagctcatgaccactcactcaaccatgacaacttcatatatagctagcagtagcacatacattaatgtcgtagcctccttgtgtcttgcttccttttagaatcagatgcctttgctagtagcccgcatgcatgcatgtgacacatataaatagctactaggaaccgagcagcaatgcaagtactacattatttggactgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0674600, RefSeq:Os04g0674600