Os04g0674700

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Revision as of 11:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0674700| Description = Similar to AMP-binding protein (Adenosine monophosphate binding protein 5 AMPBP5)| Version = NM_001060777.1 GI:115461...")
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Gene Name

Os04g0674700

Description

Similar to AMP-binding protein (Adenosine monophosphate binding protein 5 AMPBP5)

Version

NM_001060777.1 GI:115461283 GeneID:4337383

Length

1983 bp

Definition

Oryza sativa Japonica Group Os04g0674700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:34844701..34846683

Sequence Coding Region

34844827..34846302,34846389..34846589

Expression

GEO Profiles:Os04g0674700

Genome Context

<gbrowseImage1> name=NC_008397:34844701..34846683 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:34844701..34846683 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacaagctcggcgccaacccggccaactcgtgcgcgctcacgccgctgggcttcctggagcgcgccgccaccgtgttcggcgactgcccgtccgtcgtctaccacgacaccgtcttcacgtggtcgcagacccaccgccgctgcctccgcctcgcctccgcgctcgtctcctccctcggcatctcccgcggcgacgtcgtgtccgtgctcctgccgaacgtgccggcgatgtacgagatgcacttcgccgtgccgatgagcggcgccgtgctgaacagcatcaacacgcggctcgacgcgcgcacggtgtccgtcctgctccgccactccggctccaagctcatcttcgtcgacccggcgctgctccccgtcctccgcgacgcgctccgcctcctcccggcggggcacacggccccgcgcgtcgtcctcgtcgaggatccccatgagaaggagttccctcccgcccccgccgccgcgctgacgtacgagaggctcgtcgagaagggggacccggagttcgcgtgggtgcggccggcgagcgagtgggacccgatgatcctcaactacacctccggcaccacgtcggcgcccaagggggtggtgcactgccaccgggggatcttcctcatcaccgtcgactcgctggtcgactgggcggtgccgccgcggccgacgtacctgtggacgctccccatgttccacgccaatggctggagcttcccatgggggatggccgtggtgggcggcaccaacgtctgcctccgccgcgtcgacgccgccgaggtgttcgacacaatcgcgcgccgcggcgtcaaccacctgtgcggcgcgcccgtcgtgctcaacatgctggcgaacgcgcccgagggcgtgcggaagccgctcccggggaaggtgcggatcctcacggccggcgcgccgccgccggccgccgtgctgtaccgcacggaggcgatcggcttcgaggtcagccacgggtacgggctgacggagaccgcgggtctggtgctctcgtgcgcgtggaagggcgagtgggacaagctcccggcctccgagcgcgcgcggctcaaggcgaggcagggcgtgcgcacgccggggatggccgaggtggacgtcgtggacggcgagaccggccgcagcgtgccccgcgacgggtcgaccatgggcgagatcgtgctccgcggcggctgcatcacgctgggctacctcaacgacgaggcggcgacgaaggcggcgatccgggacaacgggtggttctacaccggcgacgtcggggtgatgcacccggacgggtacgtggagatccgggaccggtccaaggacgtgatcatcagcggcggggagaacatcagcagcgtggaggtggagtccgtgctgtacggccacccggcggtgaacgaggcggcggtggtggcgcggccggacgagttctggggggagacgccgtgcgcgttcgtcagcctcaagcagggcggcggcgcggtgacggcggcggacgtggtcgcgtggagccgggagcgcatgccgcggtacatggtcccaaagacggtgatcttccgcgacgagttaccgaagacgtccaccgggaagatccagaagtacgtgctccggaatatcgccaaggagatggggcccaccacgggcaccaacaccaaacgcaacagtaaaatgtag</cdnaseq>

Protein Sequence

<aaseq>MDKLGANPANSCALTPLGFLERAATVFGDCPSVVYHDTVFTWSQ THRRCLRLASALVSSLGISRGDVVSVLLPNVPAMYEMHFAVPMSGAVLNSINTRLDAR TVSVLLRHSGSKLIFVDPALLPVLRDALRLLPAGHTAPRVVLVEDPHEKEFPPAPAAA LTYERLVEKGDPEFAWVRPASEWDPMILNYTSGTTSAPKGVVHCHRGIFLITVDSLVD WAVPPRPTYLWTLPMFHANGWSFPWGMAVVGGTNVCLRRVDAAEVFDTIARRGVNHLC GAPVVLNMLANAPEGVRKPLPGKVRILTAGAPPPAAVLYRTEAIGFEVSHGYGLTETA GLVLSCAWKGEWDKLPASERARLKARQGVRTPGMAEVDVVDGETGRSVPRDGSTMGEI VLRGGCITLGYLNDEAATKAAIRDNGWFYTGDVGVMHPDGYVEIRDRSKDVIISGGEN ISSVEVESVLYGHPAVNEAAVVARPDEFWGETPCAFVSLKQGGGAVTAADVVAWSRER MPRYMVPKTVIFRDELPKTSTGKIQKYVLRNIAKEMGPTTGTNTKRNSKM</aaseq>

Gene Sequence

<dnaseqindica>382..1857#95..295#tttcctcgcctccactccaaccaccccgcgatagctggagtcaccggcgttcacacaggcgacagctcgtgctccggcgatcgacgcggcggccatggacaagctcggcgccaacccggccaactcgtgcgcgctcacgccgctgggcttcctggagcgcgccgccaccgtgttcggcgactgcccgtccgtcgtctaccacgacaccgtcttcacgtggtcgcagacccaccgccgctgcctccgcctcgcctccgcgctcgtctcctccctcggcatctcccgcggcgacgtcgtgagcatccatcgatcctttttccttccacggtcatttcgtcgaacaccttcctcgtgttgctaagctaagctggattgagtcaggtgtccgtgctcctgccgaacgtgccggcgatgtacgagatgcacttcgccgtgccgatgagcggcgccgtgctgaacagcatcaacacgcggctcgacgcgcgcacggtgtccgtcctgctccgccactccggctccaagctcatcttcgtcgacccggcgctgctccccgtcctccgcgacgcgctccgcctcctcccggcggggcacacggccccgcgcgtcgtcctcgtcgaggatccccatgagaaggagttccctcccgcccccgccgccgcgctgacgtacgagaggctcgtcgagaagggggacccggagttcgcgtgggtgcggccggcgagcgagtgggacccgatgatcctcaactacacctccggcaccacgtcggcgcccaagggggtggtgcactgccaccgggggatcttcctcatcaccgtcgactcgctggtcgactgggcggtgccgccgcggccgacgtacctgtggacgctccccatgttccacgccaatggctggagcttcccatgggggatggccgtggtgggcggcaccaacgtctgcctccgccgcgtcgacgccgccgaggtgttcgacacaatcgcgcgccgcggcgtcaaccacctgtgcggcgcgcccgtcgtgctcaacatgctggcgaacgcgcccgagggcgtgcggaagccgctcccggggaaggtgcggatcctcacggccggcgcgccgccgccggccgccgtgctgtaccgcacggaggcgatcggcttcgaggtcagccacgggtacgggctgacggagaccgcgggtctggtgctctcgtgcgcgtggaagggcgagtgggacaagctcccggcctccgagcgcgcgcggctcaaggcgaggcagggcgtgcgcacgccggggatggccgaggtggacgtcgtggacggcgagaccggccgcagcgtgccccgcgacgggtcgaccatgggcgagatcgtgctccgcggcggctgcatcacgctgggctacctcaacgacgaggcggcgacgaaggcggcgatccgggacaacgggtggttctacaccggcgacgtcggggtgatgcacccggacgggtacgtggagatccgggaccggtccaaggacgtgatcatcagcggcggggagaacatcagcagcgtggaggtggagtccgtgctgtacggccacccggcggtgaacgaggcggcggtggtggcgcggccggacgagttctggggggagacgccgtgcgcgttcgtcagcctcaagcagggcggcggcgcggtgacggcggcggacgtggtcgcgtggagccgggagcgcatgccgcggtacatggtcccaaagacggtgatcttccgcgacgagttaccgaagacgtccaccgggaagatccagaagtacgtgctccggaatatcgccaaggagatggggcccaccacgggcaccaacaccaaacgcaacagtaaaatgtagcggcatctagccagcagatgtggcacttgctttttagcgtcgtcgtcgtcttcttcactcggacagagtcacagagcagaaatgtctggtgcaggcagaggctgatgcattccgcattgtcatggc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0674700, RefSeq:Os04g0674700