Os10g0145100

From RiceWiki
Revision as of 08:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0145100| Description = Cyclin-like F-box domain containing protein| Version = NM_001070690.1 GI:115481123 GeneID:4348097| Length = 4823 bp|...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os10g0145100

Description

Cyclin-like F-box domain containing protein

Version

NM_001070690.1 GI:115481123 GeneID:4348097

Length

4823 bp

Definition

Oryza sativa Japonica Group Os10g0145100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:2716052..2720874

Sequence Coding Region

2716988..2717004,2719681..2720803

Expression

GEO Profiles:Os10g0145100

Genome Context

<gbrowseImage1> name=NC_008403:2716052..2720874 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:2716052..2720874 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcgcggcggcggaggcggaggcggcggcggtggagtcgttaccggacgacgtggtcgccgagatcctcctctgcctcccgcctcacccttccttcgtctccggcgcctccctcgtctgcaagcgctggctccacctcatccgcagccccagcttcctccgccgcgtgtgcgcattccatcgaacaccccccgtgctcggcttcttccacaactaccgggacctccccagcttcgtccccgccgagggcgtccccggccgcaaccgcatggacggagtcgacgacggcggcgacgcgcggatgttcatcgactgccgccacggccgcgccctcctccgccgatacgactgggccgacctggtcgtgtgggaccccatgaccggggagcgccgccgcatcgccggccccaaccagaagatgcagggcggcggcgccggcacctcccgccgcagcgccgcgttgttctgcagctgcgatgtttccggaggcggcggcgaccaagactgccactctagccccttccatgtcgtcgtcgtgttcaccggtggctgccgcgcgttcgcctgcgtgtactcttcgctgaccgacgcgtggggcgacctgatctcaacgccggcgccattgccatgtgagctctgtgacacgccccctgccctggttggggaagcctcgtattggctttcttatgggggactcatacttgagttccaatttggcagccaaagtttaactctgatgaaacggccattggagatgcttgccgatgtacgtcttgtgaggttggaagaagatgggcttggtcttgccttcatcaaggattccaccttgcacttgtgggcgcgggaggttgccgatgatggtgcgccgaaatggaaatggataccgcgcagggccattgagcttgacaagttcctgccgatgccaagggtgctcaccggaaaatggtgtggtgaaatgtttgtttcgattagtgggttctctgaggatggaaatgtggtgtttatacggacccttgccggcgttttccttgtttggcttgaagcattgaagttcaagaagatgtctgaccccttatacatgatgactgttcacccatattcaagcttttatgtcccaaatgctaatgtcacagaataa</cdnaseq>

Protein Sequence

<aaseq>MSAAAEAEAAAVESLPDDVVAEILLCLPPHPSFVSGASLVCKRW LHLIRSPSFLRRVCAFHRTPPVLGFFHNYRDLPSFVPAEGVPGRNRMDGVDDGGDARM FIDCRHGRALLRRYDWADLVVWDPMTGERRRIAGPNQKMQGGGAGTSRRSAALFCSCD VSGGGGDQDCHSSPFHVVVVFTGGCRAFACVYSSLTDAWGDLISTPAPLPCELCDTPP ALVGEASYWLSYGGLILEFQFGSQSLTLMKRPLEMLADVRLVRLEEDGLGLAFIKDST LHLWAREVADDGAPKWKWIPRRAIELDKFLPMPRVLTGKWCGEMFVSISGFSEDGNVV FIRTLAGVFLVWLEALKFKKMSDPLYMMTVHPYSSFYVPNANVTE</aaseq>

Gene Sequence

<dnaseqindica>3871..3887#72..1194#gggtcagaccgaatgccaacccttggcttgagagacttgagaggcagcactcccctaccaatccacacgacatgagcgcggcggcggaggcggaggcggcggcggtggagtcgttaccggacgacgtggtcgccgagatcctcctctgcctcccgcctcacccttccttcgtctccggcgcctccctcgtctgcaagcgctggctccacctcatccgcagccccagcttcctccgccgcgtgtgcgcattccatcgaacaccccccgtgctcggcttcttccacaactaccgggacctccccagcttcgtccccgccgagggcgtccccggccgcaaccgcatggacggagtcgacgacggcggcgacgcgcggatgttcatcgactgccgccacggccgcgccctcctccgccgatacgactgggccgacctggtcgtgtgggaccccatgaccggggagcgccgccgcatcgccggccccaaccagaagatgcagggcggcggcgccggcacctcccgccgcagcgccgcgttgttctgcagctgcgatgtttccggaggcggcggcgaccaagactgccactctagccccttccatgtcgtcgtcgtgttcaccggtggctgccgcgcgttcgcctgcgtgtactcttcgctgaccgacgcgtggggcgacctgatctcaacgccggcgccattgccatgtgagctctgtgacacgccccctgccctggttggggaagcctcgtattggctttcttatgggggactcatacttgagttccaatttggcagccaaagtttaactctgatgaaacggccattggagatgcttgccgatgtacgtcttgtgaggttggaagaagatgggcttggtcttgccttcatcaaggattccaccttgcacttgtgggcgcgggaggttgccgatgatggtgcgccgaaatggaaatggataccgcgcagggccattgagcttgacaagttcctgccgatgccaagggtgctcaccggaaaatggtgtggtgaaatgtttgtttcgattagtgggttctctgaggatggaaatgtggtgtttatacggacccttgccggcgttttccttgtttggcttgaagcattgaagttcaagaagatgtctgaccccttatacatgatgactgttcacccatattcaagcttttatgtcccaaatggtatgggaagttctctctctttctttatcctctgctgtttagtattgtttttagctaatgaaaagatttccagtgtctttcttttggtgctgaacccagtattatgtgtctcattgtggtttaggagtgaaagcaaatagagtatacaatagaccaaacttttccaagtcactttcattttatggcttgttgagctgatgttcaatagtcagcattaccactatggttggaagtggattgattctacttgcgccaatttcaataatatatcatttatgatttggaaaatcttttctataatgccacatttctgtaagaaaaaaatatgacaagtattgattcagcatctgttctatttacagtagtaatgatctagtagtttgattaaaataaatatgcagatgaccttttctttataatcaatgcctgtgagttggaagcgaaaacattgatattgcgcggcaagtgttaattttacatcatttagagccttagagatgaagtgctaatgtgtagtggtaacagataaagcatcatttctgatgcttatgaacaaaacataagtccagttcttatcatgtagacatagtatacttttccttcaagggtgcattgaaatgtatgttggcacaatctctgtgacttataagtgaacgaagatgcgaaaactccatgagctttcatgcacatcttctgtaatacaaaccttattagcttgttgacactttgagacatttgtgcaaaaggtactgccaaagttgctttataataccagattgatatctcattctgcatatattgtagagtaaaaactttcagatgaaaagaacagtaacagaaagataacttgtgatgtttggacatgagtactttttcaatgaccattcaggaatatgttattctctgtattggttccatgggaatgatttcaattaaattctcttacactataatgtgttgattacttgattatgctaatatatgattcttttagtataggttgcatatagtataacactattaaattctcatgtactataatgcgtgattacttgattacgctaatttatgatttctttattggttggacttattgtaagtcaagccaggccattgagctgcgaatcaacaaatcatgtaggtgtttgttttttctacttgctgattttcattgtattgttgtggttattgacttattaagttcgagtattggactgattgtatcttaattttagtactttacattaaaatcggtaatcttaatgagctagtgtttcaaaattaaactgcaccagatatcataaaatgccattctaaaacatgaaatatttggaagctaataaaaatgctatctgaaaagtgttgttcaaggcacagtcactttctagttaaaaggcagctagaactgaagctgactatcccaattcaggaagacagaaattgctggttgggttagtccaaccaatatttgggattctttgggctttgctagggctgacttcagtatgacaatcttaaaggtctataattgcacacttgagtgatctgtctacagccaattaaccagagcatctatagcagcttcaccgctttctttttagtattaaactgccttttcaatgtgaaaaaaaggcctaggcctagtactcagtcactcagagccaaaaaaaaaaaaacatgcttccaggaaaaatatacataacccaatggaccattttattgtttgctgaacatggctgactgagtgactattatacttcaaattcttcatgaagttttacatcatttctggaaaatatcttatgctgtctggtcattctaccttcctcaaactggtgatttccgttgtagtacatgtgttttacttgagtccataagggaagtgcaattatattgatgtctgctgtctttttttttgtcctgcatttgtacatcaaaatcccattattcaattaggaacatttaatggcgaaactaggaaaaagataataggtaaacaccacattcgatccagaattttatgggcatgttggttcctatgagctattttgagctgtttggatgaatgccaccaattgcgaaacatttcttgttgccacactttattgtggtgcccaatttagcagaacagtgtgtgtgtgtgtgtgtgtgtgtgacaagcagggattgaaatttcggttcgaaatttccgaaatttcggaacccaccggcatgtcaatattttggccgaaattttcggtttttctcaattttttgtgaatttagtcaaaatcagttaaattgcgtcaaaatttcagaaaatttcggtccaaaaattaccgaaccgaaatggccgaaattttagccaaaatcgaaattgaaaaccctagtgacaagtaggccatgatgttgaagaactgtaggtctgtggcatggacctgcttaactcaagtgtggcaaaatgtggcatggtagccatctggtggcaatactagatcagcaatagcccataagatgacttctaattaagatattctatacatggccaatgtgccatactaaagactagtcttaagattgctgaaatagcaaagtacaagtattggtacaccattaacttactcttggtattgtctgactttgattgtgttaattcatcaaagctcatagcttatatatcttattgtttggtgttagctaatgtcacagaataatgactggaagttccattgaagcccatgagatccaatgtgttgacagaggcaaggaaatactgacgttttcaagcaggtgaggcagcctggacatcagccttcggaaagtttttttgctcgtcttgcgtttagtggttcttttttttattgattgaaactgcagtggttattttccattcttgagctttatcataattcacaagctagagcatagcaccagcaattatacatttttggctcttatactaagtcatgttttttaagtagatcgatgtggtgattggtgagtaaataatctatatgcagattaactcatgttaattaaactagtcaaatgaaaagactttcctagacctttggtaatcatttaaaactatggatagattttagtaatttgtacctgattgcagcactttgccactggcttacaggagctcttttgtgtacagatgtttcaagaaggtagttttcactcgaattctaaaggctggatttacttgaattcttgtgtattttcctctgcaggatacgccacgggtatctgacatcaggtctgtgatctcatgatgtgcatgagttgcagttgcacgtagctcaaatcgtttgctcgactggccccgaaaccccagctgatattttgtaaagaattggtttaaatccacccctgtgtcagtcttcaatccctcctgttagctaccaggaaaaatgtattacatctgtaataggcatgctgcggtagtagattagatatattggtctctgcattttatttgtcttagctaggaagattggatgttttcttcgaaataataatacaaagtaggagagttatgctgatggtagatgaaaaacaaaattgaatgctcaggatgaatattggatatatttatgtccctatttcaatactatttctatgtgaagttcaaaaatattgct</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0145100, RefSeq:Os10g0145100