Os04g0676300

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Revision as of 11:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0676300| Description = Similar to Dihydroorotate dehydrogenase, mitochondrial precursor (EC 1.3.3.1) (Dihydroorotate oxidase) (DHOdehase)| V...")
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Gene Name

Os04g0676300

Description

Similar to Dihydroorotate dehydrogenase, mitochondrial precursor (EC 1.3.3.1) (Dihydroorotate oxidase) (DHOdehase)

Version

NM_001060790.2 GI:297603557 GeneID:4337396

Length

5279 bp

Definition

Oryza sativa Japonica Group Os04g0676300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:34919300..34924578

Sequence Coding Region

34919300..34919728,34920405..34920487,34920639..34920962,34921080..34921335,34921684..34921764
,34921839..34921946,34922033..34922062,34922208..34922345,34922470..34922507
,34922591..34922690,34924300..34924375,34924436..34924578

Expression

GEO Profiles:Os04g0676300

Genome Context

<gbrowseImage1> name=NC_008397:34919300..34924578 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:34919300..34924578 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtggcgaactgggccaagaagaggcacgaaaccgcaattctgggccgtgcaacccatcttccacgcgcggcccgattctctgattctctcctcgcttaagccctcctcctcctgcttctgcttgctccccacgccgacccagtctcgccgccgccctcgccgccgccaccgccctccccaccctcgcgcgctccgccgccgccaccgcccctcccccccgtcccctgccgggcctccccgcgctgcccccatgtcgtcttccgcagcggcgctcgcctggcgccgctccctccgcgacgccctcctgcgcggctccgcgtggcgcggcgcgcccgccgccaactccgccgccgcgcggttggccagcacggcctccgcatccgaagcggcggctggtccgaagaaggtgcctccgcctccccgcaagggaaggcttttaactggagccatgatagggttggcaattgctggaggtgcctacgtgagtaccgccgatgaagccaagttttgtggctggttattcaagtccacacaactcgtgaatccactttttgcactgcttgatgcagagtttgctcatcgcttggcagttactgctgcttcccatggatttgttccaagagaaaaaagacctgatccatcagttcttgggctagaaatttggggtaggaagtttacaaacccaattggtctagctgctggctttgataaaaacgccgaggcagttgaaggcctgttaggtatgggatttggctttgtggaagttggctctgtgacccctcttcctcaggagggaaatcctaagcctcgcatattcagattacgagaacacggtgcggtaatcaatcgttgcggatttaatagtgaaggaattgtggtagtcgctaagcgtcttggtgctcaacatggtaagcgtaagatggaagagacttcaagctccacatctcccacaaccagcgacgtgaagcaaggagggaaagcagggcctggaatcttgggagtcaatcttgggaagaacaagatcagcgaagatgctactgctgactacgtgcaaggagttcatacactatcacaatatgctgattacttggtcataaatgtctcttccccaaatactcctggtcttcgcaaattacaaggtagaaaacagttgaaagatctcgtgaagaaggtgcaagctgcaagagacgagatgcaatgggctgaagatggtcctccaccattgcttgttaagatcgcaccggacttgtctaagcaagatcttgaggatattgctgcggttgctcttgctcttaggttggatggcctgattatatcaaacactactatttcaagaccttctcctgcagacacacatccattggctcaggaagctggtggactaagtggcaaacctttatttgacctatccactaatgttctcagggagatgtatatccttacccggggaaagattcccctcataggctgtggtggtgtaagtagtggcgaggatgcatacaagaagatccgttctggagctacacttgttcagctttacactgcatttgcctatggtggcccagctcttatacccagaataaagaaggcgtggaaagcagcaggcagcacaggattcttcgagacagcatcgtccaaagccgatctgatgggagtctcaccgagggcgattgcagcagaaaccaacctgttaaaagtgttaagcaaggcgcaagccagtagtaataagcagttgaaacgtttttttgctgcttcaaatggtgccaatgcgcaagcgaccatggtggatgaacctgaggcttga</cdnaseq>

Protein Sequence

<aaseq>MWRTGPRRGTKPQFWAVQPIFHARPDSLILSSLKPSSSCFCLLP TPTQSRRRPRRRHRPPHPRALRRRHRPSPPSPAGPPRAAPMSSSAAALAWRRSLRDAL LRGSAWRGAPAANSAAARLASTASASEAAAGPKKVPPPPRKGRLLTGAMIGLAIAGGA YVSTADEAKFCGWLFKSTQLVNPLFALLDAEFAHRLAVTAASHGFVPREKRPDPSVLG LEIWGRKFTNPIGLAAGFDKNAEAVEGLLGMGFGFVEVGSVTPLPQEGNPKPRIFRLR EHGAVINRCGFNSEGIVVVAKRLGAQHGKRKMEETSSSTSPTTSDVKQGGKAGPGILG VNLGKNKISEDATADYVQGVHTLSQYADYLVINVSSPNTPGLRKLQGRKQLKDLVKKV QAARDEMQWAEDGPPPLLVKIAPDLSKQDLEDIAAVALALRLDGLIISNTTISRPSPA DTHPLAQEAGGLSGKPLFDLSTNVLREMYILTRGKIPLIGCGGVSSGEDAYKKIRSGA TLVQLYTAFAYGGPALIPRIKKAWKAAGSTGFFETASSKADLMGVSPRAIAAETNLLK VLSKAQASSNKQLKRFFAASNGANAQATMVDEPEA</aaseq>

Gene Sequence

<dnaseqindica>1..429#1106..1188#1340..1663#1781..2036#2385..2465#2540..2647#2734..2763#2909..3046#3171..3208#3292..3391#5001..5076#5137..5279#atgtggcgaactgggccaagaagaggcacgaaaccgcaattctgggccgtgcaacccatcttccacgcgcggcccgattctctgattctctcctcgcttaagccctcctcctcctgcttctgcttgctccccacgccgacccagtctcgccgccgccctcgccgccgccaccgccctccccaccctcgcgcgctccgccgccgccaccgcccctcccccccgtcccctgccgggcctccccgcgctgcccccatgtcgtcttccgcagcggcgctcgcctggcgccgctccctccgcgacgccctcctgcgcggctccgcgtggcgcggcgcgcccgccgccaactccgccgccgcgcggttggccagcacggcctccgcatccgaagcggcggctggtccgaagaaggtgcctccgcctccccgcaaggtaagggagccattcctgtttctgatctctcctcggcatttgcgcatacacctcacgtgcgtcgctcttactgagctatgtggcgctgcctttgctcaacaagagttggggaacgcgacatgtggtggatcgattacttatgagtcagtagatggcatactgcgtataaccttagttccatttgctgatggtgatgctgctgatgctagactcaatggtgttgatctgttctacacttccattccttctgaacgcactgcatctttccacagagataactttttcgttagcttttgtaccacacacgtttgtattccgtctggacatgttgatatcatgaaattataaagagaggttcggattgctattgtttgtgtacatgaagaatgcacaatgggcacctgttcttcgagatttccactttttttttaaaaaaaatatatccaggattattcttttcctatagcgccaatctggtattttttgcaattgaatcttgacgatatattaattgattgcttgtgaacgatctcatgtgaggttgagcggcattgtggcaattgctgtattttattcatgtaaaaatagtacctgtattttaccacattgatgatttgttattttgttttaactcatcagtttgtttctgtttctcattacttatttactttggcagggaaggcttttaactggagccatgatagggttggcaattgctggaggtgcctacgtgagtaccgccgatgaagccaagttttggtacatgacattttcaatcataacttctctaccattagttgtacttctctaatgtgcttgaattttgcgttatctgggtatctaggagtttttggtatatttttggctaagtgcctcttcactaataactatatcctttctgatcctgcagtggctggttattcaagtccacacaactcgtgaatccactttttgcactgcttgatgcagagtttgctcatcgcttggcagttactgctgcttcccatggatttgttccaagagaaaaaagacctgatccatcagttcttgggctagaaatttggggtaggaagtttacaaacccaattggtctagctgctggctttgataaaaacgccgaggcagttgaaggcctgttaggtatgggatttggctttgtggaagttggctctgtgacccctcttcctcaggagggaaatcctaagcctcgcatattcagattacgagaacacgggtaagcattttagttgccttctctgtattcaaactgccccatcctaatataatttcaaaaattttgaatgttcctgaataattttttctgctgctatttttttttatttccctgcagtgcggtaatcaatcgttgcggatttaatagtgaaggaattgtggtagtcgctaagcgtcttggtgctcaacatggtaagcgtaagatggaagagacttcaagctccacatctcccacaaccagcgacgtgaagcaaggagggaaagcagggcctggaatcttgggagtcaatcttgggaagaacaagatcagcgaagatgctactgctgactacgtgcaaggagttcatacactatcacaatatgctgattacttggtattcatcctcttctcttcaagaaaacctcacatggatgtgtttctacttgaacctaagcataccatttgttcacattgattggttcacactagttttgcgcacgagtgagagtgggtggggagtgggtgatgggtggggggctttgaggaactgttcagcaacgaaaaagaaaatgcctcttttcggctcttcggtcctgtccatctgttgaatggtttgtgctcagcacatagagtatgggaagtaatgacactcaactacacttacaagggttcctttttttacccctgtttgtatctgccaaggtcggccattatgttaagaatgatatactttgaactgcaggtcataaatgtctcttccccaaatactcctggtcttcgcaaattacaaggtagaaaacagttgaaagatctcgtgaagaaggtcagtcatttccttgaagtgcatcctttgtttgtcttcatacaaactttgtttgacctatgctgcatgtacaggtgcaagctgcaagagacgagatgcaatgggctgaagatggtcctccaccattgcttgttaagatcgcaccggacttgtctaagcaagatcttgaggatattgctgcggtaacatagttaacttagccttgttttctgtgctcttccattattgagttgaaaattttcttatgctttctcattatgttctctaggttgctcttgctcttaggttggatggcctggtaagctatggaattcttccttattgattttactgacgttaactagcacactcctatttaacttccatgcccaatcattttacgcttctcttctggttttgtactgatgtttgtttattcttttattatgttgctaactgcacagattatatcaaacactactatttcaagaccttctcctgcagacacacatccattggctcaggaagctggtggactaagtggcaaacctttatttgacctatccactaatgttctcagggagatgtatatccttacccgggtatatttgttgcccctattgctttcttggatatatagtagcatacctctttgaattaacatgatttttctgtcattgtattttactccaatgtccatgaatgactcctgcatttctgttacagggaaagattcccctcataggctgtggtggtgtaagtaggtaatgtcagtctctgcatttgcttttttaaattaaaataccaacacccaatattcaatcaaagtttatttatgttattacagtggcgaggatgcatacaagaagatccgttctggagctacacttgttcagctttacactgcatttgcctatggtggcccagctcttatacccagaataaaggtcataagtgaaacatatttgttatatcccaagctcgcatcacatgctcactatctttgtcataatggactatatatacactgctagcctcttcttttcccttctattttttttttagagaaagaccatacggcccagcctatattgaaggccaaaacggcaacttttcccttctatatgtgttaaatgtatcacttgtgagttctgatacttgtatattatttgaccattttcaggctgagctggctgaatgtttggaaagagatggtttcaaatctgttcaggaagctgttggggcagatttcaaatgagcttcgtgagatttcaagattgtatggttccctcaagcagcagacttcttctccacagccatgctcactcatttcattgggatgttaatctaaagaggaacaccgactgaaacttcttttgcgggtgcatcactcatcgaccttaagtaatgtgtggtaatatcacgggcgcatacatcatacttagtttttgtttgcttctaagcaagttgtacaacaaattttggttatatgtgtatattttgggcttgtggaggactggaaggtagattaatgctaaggaatggttaaggtctgaaaatgattgttttgcctttcctttttgtctgaagaattatcttcagagattctagttccggctataactttgttccttatgcaacctgtagcatccatcatacactatttctgagaaaaccagtttgaactataattgacatttcatataactactcaggatgttggggggaaaaaaatctgaatatcatgattgaccttgaccgtgcatccctgacacttccggttcattgttttggaatgtacctgtgtcgaaatctaacaaactgcagtgagctttctcttacatctcccaggttgatgcatgaaccgaatactgaacaccaaccatatacggagttggtgagatgtctcgactcatacggatgcagcttctgtcttggttcatatgggcactgcttgtcatgcatgaacatgagtagctatttgtgaagtctagtccatgatgcgtttgattaattttgttatcattgagcatttgtcatgtaatcatgttatactttactaaatgcgtcctcgagccccacagcaatgggcttaaaacttttccttagcctcaattcgtttgtcgttgtatgactgatgctggttgttaatttgaagttggtgcggagcagcgtcaacatgggatattattcgagtctcttcacaattttgtaatggtgatcgttcaagctgctaacgcaatgtaactactcagtgccgtgatctatccagtttaatataacctaattgcgtagtattttacctgggattataatagtaaattaagtatgacatctcttgtgtgtcctctcgtttctgtgaaggaactttccattgcctgattaaaacctggaccattctgctttttgtctaattaatcgccacttgttgcgatgctcgtcaccgccggtgactcttgcaaaaggcattcgttgtagtactcgtaccagtgatactagagtacttaacaaagaaagcaacataataattaattaaagaaagaagttgattttcagaaggcgtggaaagcagcaggcagcacaggattcttcgagacagcatcgtccaaagccgatctgatgggagtctcacgtatgcctttcttttttttttcttccttctctttccttcttttttttttttgggtcatagcgagggcgattgcagcagaaaccaacctgttaaaagtgttaagcaaggcgcaagccagtagtaataagcagttgaaacgtttttttgctgcttcaaatggtgccaatgcgcaagcgaccatggtggatgaacctgaggcttga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0676300, RefSeq:Os04g0676300