Os04g0677400

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Revision as of 11:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0677400| Description = Protein of unknown function DUF639 family protein| Version = NM_001060799.1 GI:115461327 GeneID:4337405| Length = 36...")
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Gene Name

Os04g0677400

Description

Protein of unknown function DUF639 family protein

Version

NM_001060799.1 GI:115461327 GeneID:4337405

Length

3684 bp

Definition

Oryza sativa Japonica Group Os04g0677400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:35001113..35004796

Sequence Coding Region

35001345..35001590,35001714..35001957,35002081..35002193,35002445..35003048,35003133..35003313
,35003406..35003548,35003704..35003873,35003953..35004039,35004146..35004371
,35004557..35004696

Expression

GEO Profiles:Os04g0677400

Genome Context

<gbrowseImage1> name=NC_008397:35001113..35004796 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:35001113..35004796 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtctccttgaggacctcctcctcgccccgcgcgtcgacggcggtggcggcggcgacggcgaggccatggcggcgcccgactacgccatccctcccctctccccaaccgccgcctccgtcgtccaccgatgcgcccggatcgccggcgtggaggtggagcagctgctgcggcggttcgagccggagaagggggaccagccgctggcgtacgccaggagcgtcgtggagtactgctcctacattgccctgcgcgtcgagaccaagcgccatgactacctcagcgacagcgagttccactcgctcacctacgacatgatgatcgcctgggaagcccccgacgacgagacggacgccgcgttgcagaaaatgtcatttagcttcgttgacggcaaggatgacgacgattgtgggtccatgttctgtttgagccccacacaaatggccattcaggttgatgggaggagaacggtcagtcctgaagcatttgccaagattattcctgcgtgtcctgcaatggcacacgcgatcactgttcgcaacttatttgatgcgctcacaaactctacgggaggccgcctgcattttctcatctaccataagtacctcaaatgtttagacaaggtgctgagatttgcgaaacgtatatcaggtggacacaaagctccagctcttcaactttctgatggagaagtgatccttgatatctatggtgccgcgacaaccaagccgattcttcaacacattgggacgtccacttggcctgggaggctcacactgacaacccatgctttgtactttgagccagtcagtgttgatttctcatacaacgaggctgtggtgtatgatctgtcaagggacttgaagcagtctataaaacgtgaatcaactggcccatggggtgctcagctatttgacaaagctgtcatgtacaaatctagctctacaagagagccggtgttcttcgaatttcctcaattcaaaggtcacactcgtcgagactactggtttgcaatcatcaaagaggtgttgcacgctcacaagttcattaggaagtacaggatgatcaatttacataaggccgaggcgctttctgttgcgacactaggaattctcagataccgcacggtgaaggagggattccacatactgcctgcacatttcaagactacccttgccttcaatttggcagagaaattgcccaagggggacaagatactggaagcattgtatggtcagatgaaagattattcctcaaggttcagagtagatgaagattctgttcaaagcagttcagatgatctgacgcttgctgatcctttcccactttctgcatatactttggtgaacatgggtttgttgacactcaaagaggaggacaatcccgaggaatgggatctcactgtccgagatgtgcagacgggaggaactagctcagtgcaaatggctctagagagatctgtaggttactctggcagagtggaggctgcgagggcgacccttgatcaggtcaaagtggaagacatcgacactaatgtggctgtcctgaaggaactgctatttccgttaattgaaataggcaaaaggcttctctttttggctgagtgggaagatccacttaaatcatacgtcttcttgttctgtttcctcttcatagtttacagaggctggatttggtacattttccctgtctttctgcttggttctaccatcttcatgctatggcaaaggcataccgggaacgggcagatgataggcgcatttgaagtcacaactccacctaggagacgaactgtagaacagctactggcgctgcaacaagctatctcgcaattagaggcacaagtgcaagccggaaacatttttcttctcaagctccgatccctcctgcttgcagcgttccctcaaagcacgaacaaagtagcagctacaatgctcgtggcatctgcgatattcgcgtacctgcccttgagaagcatacttgtactgattgtgctggaagcatacacgaggcatatgccggcgaggaagaagagcagcgagaagttggtgaggagactgagagagtggtggctgcgaatcccagctgctcctgtacagctcttgaggcctcaggataccaggagatggacatcgaggttgagatcgagatga</cdnaseq>

Protein Sequence

<aaseq>MGLLEDLLLAPRVDGGGGGDGEAMAAPDYAIPPLSPTAASVVHR CARIAGVEVEQLLRRFEPEKGDQPLAYARSVVEYCSYIALRVETKRHDYLSDSEFHSL TYDMMIAWEAPDDETDAALQKMSFSFVDGKDDDDCGSMFCLSPTQMAIQVDGRRTVSP EAFAKIIPACPAMAHAITVRNLFDALTNSTGGRLHFLIYHKYLKCLDKVLRFAKRISG GHKAPALQLSDGEVILDIYGAATTKPILQHIGTSTWPGRLTLTTHALYFEPVSVDFSY NEAVVYDLSRDLKQSIKRESTGPWGAQLFDKAVMYKSSSTREPVFFEFPQFKGHTRRD YWFAIIKEVLHAHKFIRKYRMINLHKAEALSVATLGILRYRTVKEGFHILPAHFKTTL AFNLAEKLPKGDKILEALYGQMKDYSSRFRVDEDSVQSSSDDLTLADPFPLSAYTLVN MGLLTLKEEDNPEEWDLTVRDVQTGGTSSVQMALERSVGYSGRVEAARATLDQVKVED IDTNVAVLKELLFPLIEIGKRLLFLAEWEDPLKSYVFLFCFLFIVYRGWIWYIFPVFL LGSTIFMLWQRHTGNGQMIGAFEVTTPPRRRTVEQLLALQQAISQLEAQVQAGNIFLL KLRSLLLAAFPQSTNKVAATMLVASAIFAYLPLRSILVLIVLEAYTRHMPARKKSSEK LVRRLREWWLRIPAAPVQLLRPQDTRRWTSRLRSR</aaseq>

Gene Sequence

<dnaseqindica>3207..3452#2840..3083#2604..2716#1749..2352#1484..1664#1249..1391#924..1093#758..844#426..651#101..240#gcttgccttaaacgggcggcgtgacggggacacactgccgacgatcgaacgaacgaacgaacgatgcgtccctcctggtgctccgtcgtcgccaccccagatgggtctccttgaggacctcctcctcgccccgcgcgtcgacggcggtggcggcggcgacggcgaggccatggcggcgcccgactacgccatccctcccctctccccaaccgccgcctccgtcgtccaccgatgcgcccggtatgatctccctcatctcctcctcgtcgtatggattaatgtccaatttgatttaattgatcgattcctgatcgatcgcggcgagaaacgtcaacctgggttcgaaacctcacctcttctgattatttgatattaggtcgttatttcttaatattcgtgtatttttttatcgatcgtggctgcaggatcgccggcgtggaggtggagcagctgctgcggcggttcgagccggagaagggggaccagccgctggcgtacgccaggagcgtcgtggagtactgctcctacattgccctgcgcgtcgagaccaagcgccatgactacctcagcgacagcgagttccactcgctcacctacgacatgatgatcgcctgggaagcccccgacgacgagacggacgccgcgttgcaggtgatgacaccccggttttctttttttttttcacccccaattcaacatcaccatcttgtttgttgttcatacgcaactctgatcagaaaccgatacgctataacagaaaatgtcatttagcttcgttgacggcaaggatgacgacgattgtgggtccatgttctgtttgagccccacacaaatggccattcaggttatatatatatctctgtcaatttgacatattttgtggtttctcaagtatcaatccaaacatttgatgaaatatttaggttgatgggaggagaacggtcagtcctgaagcatttgccaagattattcctgcgtgtcctgcaatggcacacgcgatcactgttcgcaacttatttgatgcgctcacaaactctacgggaggccgcctgcattttctcatctaccataagtacctcaaatgtttagacaagtatgcattggcaccagcttctcttgtttctcttcattgttacagttattgtcattctctgaaacctgaacaatgagcattactgaatattcaggcactcggttactttcactgcatgattgccttactatggcgcctctggtttctgatgttagggtgctgagatttgcgaaacgtatatcaggtggacacaaagctccagctcttcaactttctgatggagaagtgatccttgatatctatggtgccgcgacaaccaagccgattcttcaacacattgggacgtccacttggcctggttaagaatcctccctatggtaattttgatcagtgttggtgaattgtttccttcactatggccttaaggtgtataaggtgcatattttgcagggaggctcacactgacaacccatgctttgtactttgagccagtcagtgttgatttctcatacaacgaggctgtggtgtatgatctgtcaagggacttgaagcagtctataaaacgtgaatcaactggcccatggggtgctcagctatttgacaaagctgtcatgtacaaatctagctctacgtgagtaattactactgtagaataaaattttttttaagtttctgctcatcttgtagctttgctcatacaattttactttgacagaagagagccggtgttcttcgaatttcctcaattcaaaggtcacactcgtcgagactactggtttgcaatcatcaaagaggtgttgcacgctcacaagttcattaggaagtacaggatgatcaatttacataaggccgaggcgctttctgttgcgacactaggaattctcagataccgcacggtgaaggagggattccacatactgcctgcacatttcaagactacccttgccttcaatttggcagagaaattgcccaagggggacaagatactggaagcattgtatggtcagatgaaagattattcctcaaggttcagagtagatgaagattctgttcaaagcagttcagatgatctgacgcttgctgatcctttcccactttctgcatatactttggtgaacatgggtttgttgacactcaaagaggaggacaatcccgaggaatgggatctcactgtccgagatgtgcagacgggaggaactagctcagtgcaaatggctctagagagatctgtaggttactctggcagagtggaggctgcgagggcgacccttgatcaggtcaaagtggaagacatcgacactaatgtggctgtcctgaaggtactaaatgtcattttctcataatcttctaaactaagatatgaattcagataggaaaagtcttgagttctggaacaaccactgagctctgagtgacctgtacaggcatacctaagcctgaatttccattcatagttttagattgctcaataattgtagactgatagttgcttccaatgtcatcaagattgatcacaattcaagccattattaagtgtattaatgtttgttgatttactgttaatatgcaggaactgctatttccgttaattgaaataggcaaaaggcttctctttttggctgagtgggaagatccacttaaatcatacgtcttcttgttctgtttcctcttcatagtttacaggtaatatctgaaatcacctctcttttttttttggctaaaacgaactgaaatacttctaccagtagttaaaaaattttgtttcacggagcaatgttaatacctattccatactaaaccctgcagaggctggatttggtacattttccctgtctttctgcttggttctaccatcttcatgctatggcaaaggcataccgggaacgggcagatgataggcgcatttgaagtcacaactccacctaggagacgaactgtagaacagctactggcgctgcaacaagctatctcgcaattagaggcacaagtgcaagccggaaacatttttcttctcaagctccgatccctcctgcttgcagcgttccctcaagtacgttacttcttctcacattatcactcacaactacgaattactttgtaaaccatcacatcaaaactctaaatcttgcaacattctgcaattactatataacaattgttattgtctggtcagagcacgaacaaagtagcagctacaatgctcgtggcatctgcgatattcgcgtacctgcccttgagaagcatacttgtactgattgtgctggaagcatacacgaggcatatgccggcgaggaagaagagcagcgagaagttggtgaggagactgagagagtggtggctgcgaatcccagctgctcctgtacagctcttgaggcctcaggataccaggagatggacatcgaggttgagatcgagatgacccacatcggaaatgtcggtactttacacatgtattatatgtacctgtaaattcatcatgttgttagaaatgttgatatatacgatcagatttttgtgttgaaatggaaagtacatattgtgcaaaatggaattgtgggtggatcgtattttgtattgtgaatttttgttgaaagctgcactgaaggaatttggctgtctatcctatgcagtagctactatgcatttatttg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0677400, RefSeq:Os04g0677400