Os10g0145700

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Revision as of 08:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0145700| Description = Leucine-rich repeat, plant specific containing protein| Version = NM_001189093.1 GI:297727316 GeneID:9271002| Length...")
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Gene Name

Os10g0145700

Description

Leucine-rich repeat, plant specific containing protein

Version

NM_001189093.1 GI:297727316 GeneID:9271002

Length

6249 bp

Definition

Oryza sativa Japonica Group Os10g0145700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:2737219..2743467

Sequence Coding Region

2737219..2737279,2739934..2740008,2740095..2740166,2740736..2740909,2741490..2741651
,2742619..2742690,2742795..2742869,2742992..2743063,2743189..2743318
,2743431..2743467

Expression

GEO Profiles:Os10g0145700

Genome Context

<gbrowseImage1> name=NC_008403:2737219..2743467 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:2737219..2743467 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggattatcatcttcttgttgagtgttattgtgctgctgctggcctcaatgggattgcaggtagctgggacacggacaccaaaccatcgaactgggggaatggcaacgatccatgtggagacaaatggatcgggataatttgcaccgggaaccgggtcacgtccataagactgtcaagttttggattgtccgggacgctttccggggacattcagtccttatcagaattgcagtacctggacttatcctacaacaagaacttgcgtggaccccttccttcaaccattggaaccttgagcaagctccaaaacttaattcttgttggctgcagctttactggtgaaataccaaaagagataggccagctctcaaacctgatatttctatctttgaattccaacaagttcaatggtagcataccgccatcgctttgctgcctctcgaagctatactggttcgatctgtctgacaatcagctcactggaggacttcccatatccaactggacaagtcttgggttggacaatctaacaaacactaagcacttccagctctccagcatcgagaacgccggcgcgggcttggcgccgccagtggccatcttgctgatctccgtcgagccctctggcgtctgggcagtcgccgccgccatagccaatccggcctccacctgctgcaaatgtcttaaggggaagatggcgacccccttctccgagcgacggcttcttgacaacaacaaattatccggaagcatcccttctactttaggccttcttaatacattggaagttctgcgtttcgataacaatgcgcaattgacaggaccagttcctaccaacctcaacaacttaaccaggcttacagaacttctaccgctcatgttcgacgctatcgaaaatcatgcattggatggatgcccgggcatttag</cdnaseq>

Protein Sequence

<aaseq>MDYHLLVECYCAAAGLNGIAGSWDTDTKPSNWGNGNDPCGDKWI GIICTGNRVTSIRLSSFGLSGTLSGDIQSLSELQYLDLSYNKNLRGPLPSTIGTLSKL QNLILVGCSFTGEIPKEIGQLSNLIFLSLNSNKFNGSIPPSLCCLSKLYWFDLSDNQL TGGLPISNWTSLGLDNLTNTKHFQLSSIENAGAGLAPPVAILLISVEPSGVWAVAAAI ANPASTCCKCLKGKMATPFSERRLLDNNKLSGSIPSTLGLLNTLEVLRFDNNAQLTGP VPTNLNNLTRLTELLPLMFDAIENHALDGCPGI</aaseq>

Gene Sequence

<dnaseqindica>6189..6249#3460..3534#3302..3373#2559..2732#1817..1978#778..849#599..673#405..476#150..279#1..37#atggattatcatcttcttgttgagtgttattgtgctggtttttgtcgcttcggccgacacgaacgcaagacagtaagtatagttcagttcctcttcagtatttgttgctgcagtgctaattttgatgttcttcttgtctatctctgcagctgctggcctcaatgggattgcaggtagctgggacacggacaccaaaccatcgaactgggggaatggcaacgatccatgtggagacaaatggatcgggataatttgcaccgggaaccgggtcacgtccatgttagtatatcagcatcagagatttgtatatgtccatggagtgatttttttttcttgcaattatgcagtaatatgagtaacaaagatcactcatgttgtcttcttgtttcatggtgtttttacagaagactgtcaagttttggattgtccgggacgctttccggggacattcagtccttatcagaattgcagtacctgtatgtattctcttctctctgtagtttgagcactttggattgcgaattaggcgtaaacatgtgcatagttggaaatttggaaatttatgcaaacttctgaaacgcttctgtttttgttgcagggacttatcctacaacaagaacttgcgtggaccccttccttcaaccattggaaccttgagcaagctccaaaacttgtgagtagtttaactttggagaagttcagttagtctgctaacttgagatttttcagtcagttcatggattcttgtttgacttgtcccctctcatttctctgcagaattcttgttggctgcagctttactggtgaaataccaaaagagataggccagctctcaaacctgatatttctgtagggaacttagacctgattcttgattatgtctaaaatcttaggcctgcggtcgcattccctgaacttctctagatcatatctaatctgaaaatagaatacatctaatagatttatagtctggttgaaaaatgttttaatataaactccatcatttgaaaaataaacaatttcgaactttattggttggacttttacctcagaatttaaagttcacctagtgatgtagattgacatgatggtaacattgtatattttaatcctaattttaaaatatggcaggtaagattatttcacttattagccaaccatgcttatacagagtatccattatctaaaaaaatgcttgtacagagtaaacagcaagtaaaaaaattaattaatttcctcctgtgagagtattacctccattgggataataggaataacaaccaaatggatggcctaaaaagcttaactacaaaaaaaatcctataagcttgtaacaagttaagaacttgatctggacatttagaaagataagtgtgatgcagttaaaccttttcccttttgggataatcaagtaccttaggtatggaggaggtggttatctggttttattagttggtaatattgaattctcaggcctggtgttcatctattatattattaaaacaacctttaaagaagtcaccatattcaccgtgaaagctagaaattctacattaatcgaagaaaatatgaattatttacaccgttagattgttatgtctatattttaacgtctgagaaaagccttaatgacattgccaccatatattttacttagcaacctaactagtagcaaacacgaagctttcttctatgttcctgtatcagcctttcacgcagtaatcgctcgtcgtaatattctgcacatatagtatcagtataatattgtacatttcctaaataaaaaagtattgttcattgtactctattcctacagatctttgaattccaacaagttcaatggtagcataccgccatcgctttgctgcctctcgaagctatactggttcgatctgtctgacaatcagctcactggaggacttcccatatccaactggacaagtcttgggttggacaatctaacaaacactaagcacttgtaagtaaattacaatattcttgatttcataagattttttttcattttctttgctgttgtctaatgaatatgtacacacgtttcgtcacagccatttcgggacgaatcagctctctggaaccatacctagccagattgtcaactcaaatatgaagctgatacatctgtatgactaaccaaattcttcatcctcctaaggaataagtccactttgactttcttaaaagtgacccaaatctaatccatgaccctgaaccacaaaaccagatatgttgacccctaaactgttaaaaccgatgcaatttgactccctcgacggtttcgctgatgtggcacgttacgtgacgatgttgacctagtcttcgtcctacatggtattgacgtggtgcttacgtgtcattagaattaaaaaaatatgtgcgcccacttgtcattcacaaaaaaaatttgtgtgacccactgacaggtggagcccatatgttagtctatcccttcctcatcctcccgatctccccttctctctcccttttttgttcatgagccccagttcgccatgccccatgccgccgtcatcgagcagccagctctccagcatcgagaacgccggcgcgggcttggcgccgccagtggccatcttgctgatctccgtcgagccctctggcgtctgggcagtcgccgccgccatagccaatccggcctccacctgctgcaaatgtcttaaggggaagatggcgacccccttctccgagcgacggtcggcgaccacagcggcaccacgccgcccctctcctccttcctgcctccgctcatgaatgtagccaatccccttggttgagctcggagaagatagaatcagcgccgccactctccctcccgttgccgccactccggacgccgcctgctgttgccggcccctgcttgccgaatggggagggagagagaaggggaggatgaagaatgtgggccccacctgccagtgggtcccacaatttttttaatgacaaatgggtccaacatattttttttaattctaatgacaagcaagcgccacgtcaatgccacgtaggacgaagactggtcaacatcgccacgtaacatgccacgtcagcgaaaccgctcaccaaaaccgtcgagggagtcaaattgcaccggttttaacagtttaggggtcaagatatctgattttgcggttcagggtcatggattaaatttgggtcagttttaagggagtcaaagtggacttattcctcatcataattgtgtttaattattgttgttaagctcagacctgagactgatttctaccatctgtatattatccaggcttcttgacaacaacaaattatccggaagcatcccttctactttaggccttcttaatacattggaagttctgtgagtacaagcgcatattatggatgagacaataaaattcatagattgacactgctgccttatgtcatgaagttcgatcgatgcaggcgtttcgataacaatgcgcaattgacaggaccagttcctaccaacctcaacaacttaaccaggcttacagaactgtgagtttactatgtgtgtctgctttattaattgtcaattattcaatattaatagcttacgcgctatgctttcatttgacactagccatcttgcaaactgcaatcttactggtccactgccagacctaactggaatgaacgaactcatgtatttgtaagtgatcagtcaacccttccaatgttaaaactaaaattgactttccatttatcatactatgcaactttctggatggtttcatcttactaacttgcaattcaatttgttacaggtacatgaacaacaatagcttcagttcatcattatttgaataatcactagccgacgcattataggctgaggcgctatcagattcataatttacatacctaaaataattatttgaataatcaccagccgacgcggtatatatatccattaaaaataggtctaacaacatatgtatgagaattaatggtacttgtaaaattattttgagaaacatatatatttgtaaattttacctcaggcttggtgtagtagggaaacggtgtagttctatggtatgctcgtccatatgtgcctttagcacagaagcttaactcctagtacgatggctgtgtacacttaacaaaaaatctaacaaattgatctgttagtgcaaatagaagcctttgttcacacgtagcaggatcgcagcactggcgtatgtcttggctccctgtacacacgacgaccacttaacccgagattgctacctggcgatggatcgccaggggcgatcaggattcggtcctcccttccttccacctgattttcttttttggcaccgtattactttcctaaatttatgcatctaaagtttgtacatttcaagttcaagtttagggacccaaaatttataaatcaagtttatatatccgattcaaatttaaatttgaattcaaatattttttatatatagtacatctaaagtttatacacctaaagtttataaacctaaagtttataagtcaaaatttacatacccgattcaattttgaatttgaattatatccgattcaaatttgaatttgaattcaaatattttttatatatagtatttctatgcatctaaagtttatacacctaaaatttatagacccaaaatttataagtcaaaagtttacatacccgattcaaatttgaatttgaattcaaatattagtttatagacataaagtttataagtcaaaagtttacatacctgtttcaattttgaatttgaattcaaactttttatatatagtatttctatacataaattttttcaactttgtgttttttttaaaaaaataatttatggtgtagtaggaagagaagaataagaggaggaaggaagagagtagtgtataggggggatggggttgggggggtgatctttatgctactatggttttgatgtcttcttgtgtcgctatctgaggtttgaaagtgagtaaagatctgaagctaaggtaaataataggttaaaacagaagaatgataagaataaagtacctctctgaatagctactttcttacttgactttctgatcaatagaaaaagacttgctgtcctcaagttcaaggccttagagtgagaagggaattacgtggtacctctctttttcaataagcattctaccactaactatgtgcctggctatggtttgtcaactcttaccttttggtatgagaacggatgctggaggtaaatggatacacagctactgcctgacttctcagatttcagtatggaacaaaaatccatcttggctagctattcgggaggacttctccatcggatcagaacatgaattgtagggcatacttagtagatgcagatataggtattcattattcttcctcagatggggaatgggccaagccgatccgttgttggcactgaaagtgcatttgctagtttgaaaggagctgaattcgggtgggattcaaaatgattcttatgtttcgtagcatgcagcgcagactcacttggtaaatagccttccataaaagaggcaaggtgctcacacatgaaattccctttcttcgtgcactcatttactagatagtcaggaaccttcttttgacttgaccagcttacttgtatagtatagtagtaggcatttgcttctgaacgaccttacgaatggatcaactagaaatgaatcggtgtcataaacgaatttagctaaccgttgtagtaaatagcatgacaccaagcaatcgatcaaagccaactcaaaagaaagcccatcccttcatccaacgtgaaaatattctcaagaagaagccaaaagaaagagaggtgaaacagagtagagagaatcaggtgcttccagtgattagttatcaaaaagcactgttttccagatcggattcgatcacagtcccataagcagtagggaccacgagtgagcatgagcctatttcgtgatcggctagttgctcaaaaaatcgtataaaaatcaagcaagaaaacgtatgcgctttagcaacaaagcgctcatcccttgttctttcacgctagttgctcaatccgttgcttgcttctcttctgtcttggaaaagtgaggatttcctatctgatccaagggaaggaagagaggtggaaagtgttgctgtgtcaaattgagattgtgtgggtgttcagtctaccgctcatgttcgacgctatcgaaaatcatgcattggatggatgcccgggcatttag</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0145700, RefSeq:Os10g0145700