Os04g0679400

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Revision as of 11:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0679400| Description = Similar to Ripening-associated protein (Fragment)| Version = NM_001060815.2 GI:297603578 GeneID:4337421| Length = 17...")
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Gene Name

Os04g0679400

Description

Similar to Ripening-associated protein (Fragment)

Version

NM_001060815.2 GI:297603578 GeneID:4337421

Length

1727 bp

Definition

Oryza sativa Japonica Group Os04g0679400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:35094237..35095963

Sequence Coding Region

35094585..35094905,35095117..35095338

Expression

GEO Profiles:Os04g0679400

Genome Context

<gbrowseImage1> name=NC_008397:35094237..35095963 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:35094237..35095963 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>catctactgcgtgttcatggggaggctggacaacctgagcagcctgatccggcagtacgggctgtgcagccgctccaccaacgaggcgctgctcgtcatcgaggcctaccgcaccctccgcgaccgcggcccctaccccgccgaccagtcgtcaaggatctctccggctccttcgccttcgtcgtcttcgacaacaagtccggcgccgtcttccccgccctgagtacggatggggaggtgccgttgtattgggggatcgcggcggatgggtcggtggtgatctgcgacgagagggagatcgtgaagggagggtgcggcaagtcgtacgcgccgttcccggtggggtgcatgttccacagcgagggggggctcaagagcttcgagcacccgatgaaccggctgaaggcgatgccgcgggtggacagcgagggcgtcatgtgcggcgccaccttcaaggtcgacaccttcaccaagatcaactccatgccccgcgtcggcagcgccaccaactgggccgccacctgggacgacgctgccgcctga</cdnaseq>

Protein Sequence

<aaseq>HLLRVHGEAGQPEQPDPAVRAVQPLHQRGAARHRGLPHPPRPRP LPRRPVVKDLSGSFAFVVFDNKSGAVFPALSTDGEVPLYWGIAADGSVVICDEREIVK GGCGKSYAPFPVGCMFHSEGGLKSFEHPMNRLKAMPRVDSEGVMCGATFKVDTFTKIN SMPRVGSATNWAATWDDAAA</aaseq>

Gene Sequence

<dnaseqindica>1059..1379#626..847#acatcagcactgactccaataacacgctcatcaaacagcgcgcgcgagcgagggatggataggatattttcgttcgcgttcgtgccatcctaaatcccgtctataaagccgtgcacatctctatcctcacctccattccattccactcgccaacccgacacgtctctcatcttcacgcaacgaacagcagcagcagctcaagctaagctaagctaaagtactacgtgttctttcgtcttcgtcggcgccggagtttgattcgtcggagctagctagcaagaggaagaagaaaatgttggccatattccagaagcaggtggcgcacgcgccggcggagctgaacagcccgcggagcagcgcggcgaagcccaagaaccccgacgagatcctcagggacttccacgccctccaccccatcgaggccttctccacctccttcggcggcggcgccgccctcgcctgcgtcgccggccacgcccgcaatggcctctctggctacgagaggtaaattaaatcaatttaatcgatgaggcaatgaatccgaataattaaggtgattaaaacgtaggggatcgataataatggtaaatgggtgtgtacacaggatgttctgtgggctggatgacatctactgcgtgttcatggggaggctggacaacctgagcagcctgatccggcagtacgggctgtgcagccgctccaccaacgaggcgctgctcgtcatcgaggcctaccgcaccctccgcgaccgcggcccctaccccgccgaccagtcgtcaaggatctctccggctccttcgccttcgtcgtcttcgacaacaagtccggcgccgtcttccccgccctggtaatttaaaccactactagactggttttctgaatcgaattgatgaatttgtgcttcaaattgaacttcctgtgagtgtagcgtggccctgtccccttcccgctgttaggagttgtgtttagccgccgtagtagttcctaagcttcagtttctgattgttctgcttttctttttcttatatattgacgttcattcgctttgcgcgatgcagagtacggatggggaggtgccgttgtattgggggatcgcggcggatgggtcggtggtgatctgcgacgagagggagatcgtgaagggagggtgcggcaagtcgtacgcgccgttcccggtggggtgcatgttccacagcgagggggggctcaagagcttcgagcacccgatgaaccggctgaaggcgatgccgcgggtggacagcgagggcgtcatgtgcggcgccaccttcaaggtcgacaccttcaccaagatcaactccatgccccgcgtcggcagcgccaccaactgggccgccacctgggacgacgctgccgcctgatgatggcgctccgtacgccgtcgtctcgtcgccgtgcgcctgccctcgccgccggcctcctcgccgtttgccgccgccgctcatctcttcctcctcttcttcctcctctctatatccgatgtgcttctccgtccgaagcatgcagattattagagcgatatttgcagctagcgtggaagcgcgccaatctatttttctgcggtgtttttacttaattttcacctcttctttttaaatttttatgtccatctttgggctctcgcctctcggcaatgtatattctcggtcgcgggtggcatgtcatggtacatactatgaatgatgaataagaaagagtttgcttcactc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0679400, RefSeq:Os04g0679400