Os04g0679900

From RiceWiki
Revision as of 11:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0679900| Description = Conserved hypothetical protein| Version = NM_001060818.1 GI:115461365 GeneID:4337425| Length = 3364 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0679900

Description

Conserved hypothetical protein

Version

NM_001060818.1 GI:115461365 GeneID:4337425

Length

3364 bp

Definition

Oryza sativa Japonica Group Os04g0679900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:35117752..35121115

Sequence Coding Region

35118051..35118062,35118164..35118358,35118598..35118702,35118906..35118986,35119331..35119430
,35120716..35120876

Expression

GEO Profiles:Os04g0679900

Genome Context

<gbrowseImage1> name=NC_008397:35117752..35121115 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:35117752..35121115 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggggagggtggtgcggagctgcgtgcagacggggctcaaggcggtgaactccgtgctggggctcgccgggatggccgtcatcctctacgcgctctggatgctccgcgcatggtacagggacgtcgccgacctccactaccgcctcccggtcccatggtttatctacacttttattggcctgggagtctttatgtgcttgttgacttgctctggtcatattgcagctgaaactgcaaacagccactgtctctcttgttacatgatttttgtgtttattattattatattggaaggagcaatcaccactgacgtatttctgaatagcaactgggaggaggatttccctgatgacccatctggaaagtttgaagaattcaaggattttataagatcaaattttgagatttgtgaatggataggcctctcggttgtcgctgcccaggtgttgtcaatcgttcttggaatggtacttagggctcttggacctgaccgtgaaagtgactatgatagcgacgacgacccctctgtgcctgcaaggctgcctttactaagaaaccagtaccaacatggcataaactattctgaacataccttacctcaaagtagtgattcatggagtttgcggattttagataaggctaacaaatga</cdnaseq>

Protein Sequence

<aaseq>MAGRVVRSCVQTGLKAVNSVLGLAGMAVILYALWMLRAWYRDVA DLHYRLPVPWFIYTFIGLGVFMCLLTCSGHIAAETANSHCLSCYMIFVFIIIILEGAI TTDVFLNSNWEEDFPDDPSGKFEEFKDFIRSNFEICEWIGLSVVAAQVLSIVLGMVLR ALGPDRESDYDSDDDPSVPARLPLLRNQYQHGINYSEHTLPQSSDSWSLRILDKANK</aaseq>

Gene Sequence

<dnaseqindica>3054..3065#2758..2952#2414..2518#2130..2210#1686..1785#240..400#atccatccatcgcctcctctttccctcccacctccacacgtcccctcctcttccccaatattccacgccaccgccgccgtcaacctccgccatcagcagcagcagcagcggtctcccattcccattctttgctcccacgcgaggctgcgcggagaacagctgcacaggtggggtgggggtgcagaccgagctgaggagtagccggagttggtggtgagagacgcgggtggggcgcggccatggcggggagggtggtgcggagctgcgtgcagacggggctcaaggcggtgaactccgtgctggggctcgccgggatggccgtcatcctctacgcgctctggatgctccgcgcatggtacagggacgtcgccgacctccactaccgcctcccggtcccatggtattcatcccatctccttcctcctccccaactcggatctcgtctgctactactctctcgccttctcaatctctgctttagttttttatcactacatcgattgcagtttttccccccttttgggtttcttgatctgggcgtgtaaccctgtgctaactgctaactgtcccatatgctttgcttccgcgaaacttcgagacgaattcgtcgaagcaaaatgcatatactccatactgtttcattggagaaaatggttttctctatacagtttatctgaggattccgtgcaagaacagggaggtttggaaattgcgtgttagccgaacccacccccaccacccaaaggaaaaagcaagcacctctctttttctcctgtggaagttaaagtttaccctttttctgatgggtgatggacaatactcggctcagcataccactattgctccaaatttgggtacagtgatgcggaagaaaagtagtggatgttagaatttagagaatttcggtggttgaggtgatcaccatgaagtagtattgtttttggaatcataccccaaaaatttaggtggcggctgcaatgtagctagggccatattggagcatgacgcaatggcttaatgcaatggatggcccaaccaaaagggacatgcgacagttgattggatctggttgggcgatagcacttgcgaaggagataaacgaataatttttgggttggacaatcgctttcctagacttggtgcctgcttggctgagcttcagattagattttaaactttaggactaattttagtggttttcttcgccactttcttgtctggctctagtttcatagtaattgctaaaatggaaagctgaaaaacctatctaaaactagtctttagaaatcaagctttaaaattcgaaattgttttaagttataatctgatgcagaaacaagcaggaccgatgacgattatacctctccgcacctttttttttacaataatgcccctccacatttctattactgctaactaagatggtagtataaatagatctaaacccttcgatcaaatgagattaacggttcagattgctttctaatgccaatggagagcaccatagtggggctccaattaatttgggctgttattcatacctttcttgccgttaggatgtcaaaggtgctattctgtatactagatgcatactttaccatataaacatctagacatttacattccttgtaagtttgtgatatgaactagtaattcttttactaaaactttcactcaccgtgcaggtttatctacacttttattggcctgggagtctttatgtgcttgttgacttgctctggtcatattgcagctgaaactgcaaacagccactgtctctcttgtgtatccttcaagcagcttggtttatggagttgttttggtgcctaactttacacttttatgtttttagttaataaagtgaagttacctgcgtgttcgttgaccggatatgttctatagtacagaactatgtttttttactggtttatataattgaaatgccacaaaaaaaaatttcggttgagcagatctttctttttaacatgagcagatcatttctgaaatgacagtgcaaacttctattcccttttatttgcggggcaactcttgatccatttaagcctccaaccttacatgtaactcaacctggtgatgcaaggactattttgccttaacctgacattcagtacatgatttttgtgtttattattattatattggaaggagcaatcaccactgacgtatttctgaatagcaactgggaggaggtaaggatcatttccttctgttgttttttcccctctctctctctctctctctctctctctctctctctctctctctctcaatacaacattatggtttttaactgcttcaccaacattacggtatgcatgtatgtattcctttgtaatggcatgtattttcttctattcgatcggtgattgtttggtattttccaacccttcaggatttccctgatgacccatctggaaagtttgaagaattcaaggattttataagatcaaattttgagatttgtgaatggataggcctctcggttgtcgctgcccaggtgatattttctgctcctttgctgaactaggacccaattcattttttttccttctataacttgtaaccaaagaattgtgtgcgcacatgagcatgtgtcgttgagatcttccaatatgcttgcaagttgaattatacttctctactggcataatgagaattcactgaaagcccaccatgtacactttggactggagaaacactgatttcctctataacatactatacaattattttcaggtgttgtcaatcgttcttggaatggtacttagggctcttggacctgaccgtgaaagtgactatgatagcgacgacgacccctctgtgcctgcaaggctgcctttactaagaaaccagtaccaacatggcataaactattctgaacataccttacctcaaagtagtgattcatggagtttgcggattttagataaggtgagatatgttttccaacaaattatttcttcatttcctcgattccttctcagtttgttaagcattagtaatgcctttccatgttttccttttcctttcaggctaacaaatgaaaattttctgacgatgaacctttggatggagctatcaccatgcttcggcctgaaggtttagctcgacatgaggaaatgatacccttcttttttttttctaggtagcaatattgaatggcttcttttgattgcctaaacatgcacaactatttgagtagcatgcaactgacccttacagccccttgatgttatgggaagaatgttgtattttacagtgcttcagaaacagatgatggcgtgattccgtcactgacaaaaacacagttgaatgttttgtagtccgtcgagctgtctgatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0679900, RefSeq:Os04g0679900