Os04g0680700

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Revision as of 11:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0680700| Description = MutS III domain containing protein| Version = NM_001060822.1 GI:115461373 GeneID:4337429| Length = 4533 bp| Definit...")
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Gene Name

Os04g0680700

Description

MutS III domain containing protein

Version

NM_001060822.1 GI:115461373 GeneID:4337429

Length

4533 bp

Definition

Oryza sativa Japonica Group Os04g0680700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:35151365..35155897

Sequence Coding Region

35151484..35152043,35152161..35153094

Expression

GEO Profiles:Os04g0680700

Genome Context

<gbrowseImage1> name=NC_008397:35151365..35155897 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:35151365..35155897 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccgccgccgccgccgccgccgcgaaacccaaccttcttcttccagtctccgtggctatcccctcttctagggtttctcttcccaccggcctcgtatgcagcgcacggtccccgccgccacgcctcagggccgccgccgccgccgccgccgcctcccaggccctaacgtcgcctgtcgcggcggagactccggaggcgaagcagatgcgggtagagacggaggccgccctggaatggggcggcgtgtgcgcgcggctggccgggttcgcctccaccgccgcggggcgcgccgcctgcggagaggggcgggtgcccgtcgggcggagccgggaggagagcgagcggctgctcgaacagacggcggcggccgcgctgctgcctgctccgctggatttcggcggcgtggaggacgtgtccgccgccatcgccgcggcggctggggcccggctgcttgcggtgagggagatatgtggagtcgggcgcagcatccgtgccgcacgcagggtgttcgaccaattgaagacgctctcagaggagacaccagatggaaggagctacactcctcttctggatataatgcaagactgtgacttcttgacagaacttgtgcaacggatagagttttgccttgattatactctttctgtggtccttgatcgggccagcgataaactagcaacaatccgcaaggagaggaggaagaacattgatatgttagaatctctgttgagagatacatccacaaagatcttccagggtggtgggattgatagccctgttgtcactaagcgccgttctaggatgtgtgtcggtgttaaagcttcacacaagcatctggttcctggtggaattgttttgagttccagtggctctggcgcaacatattttatggagccaagggacgccatcaggctgaacaacatggaagtaaagctctcaggtgatgaaagagctgaagaattagcaatattgggtctacttacttcaagcatagctgactccgaaatgaagatcaggcatttgatggggaaaatattggaacttgacctggcttgtgccagaggttcatacgctttatggataaatgctgtgaggccagcctttactgacagggatagtgatactcaactgaatccaaatagtgaatgctcagtttttatcgagggcattcagcatcctttacttcttgaacagtctcttagtatggtaaaagaatcaaccagagtagggaaaggacagctttctgatgaacatcttgtctctccaatgcctattcctctggacatgcaggtgagaaacgatactaggataattgtgatctctggacccaacactggaggcaaaactgccaccatgaagacgttggggttggcctctctgatgtcaaaggctggaatgttcttcccagccaaaggaacccctaggcttccatggttcgatcaagttcttgcagatatcggagatcaccaggtagtctctgtcttttga</cdnaseq>

Protein Sequence

<aaseq>MAAAAAAAAAKPNLLLPVSVAIPSSRVSLPTGLVCSARSPPPRL RAAAAAAAASQALTSPVAAETPEAKQMRVETEAALEWGGVCARLAGFASTAAGRAACG EGRVPVGRSREESERLLEQTAAAALLPAPLDFGGVEDVSAAIAAAAGARLLAVREICG VGRSIRAARRVFDQLKTLSEETPDGRSYTPLLDIMQDCDFLTELVQRIEFCLDYTLSV VLDRASDKLATIRKERRKNIDMLESLLRDTSTKIFQGGGIDSPVVTKRRSRMCVGVKA SHKHLVPGGIVLSSSGSGATYFMEPRDAIRLNNMEVKLSGDERAEELAILGLLTSSIA DSEMKIRHLMGKILELDLACARGSYALWINAVRPAFTDRDSDTQLNPNSECSVFIEGI QHPLLLEQSLSMVKESTRVGKGQLSDEHLVSPMPIPLDMQVRNDTRIIVISGPNTGGK TATMKTLGLASLMSKAGMFFPAKGTPRLPWFDQVLADIGDHQVVSVF</aaseq>

Gene Sequence

<dnaseqindica>120..679#797..1730#gtaagaagaatacgtcaagtccacacgaaagcggtattcgatggggacaaaccaggataaggcgaactttccggcgggaagccaagccgagctctcccgcctctcccacggccacagccatggcggccgccgccgccgccgccgccgcgaaacccaaccttcttcttccagtctccgtggctatcccctcttctagggtttctcttcccaccggcctcgtatgcagcgcacggtccccgccgccacgcctcagggccgccgccgccgccgccgccgcctcccaggccctaacgtcgcctgtcgcggcggagactccggaggcgaagcagatgcgggtagagacggaggccgccctggaatggggcggcgtgtgcgcgcggctggccgggttcgcctccaccgccgcggggcgcgccgcctgcggagaggggcgggtgcccgtcgggcggagccgggaggagagcgagcggctgctcgaacagacggcggcggccgcgctgctgcctgctccgctggatttcggcggcgtggaggacgtgtccgccgccatcgccgcggcggctggggcccggctgcttgcggtgagggagatatgtggagtcgggcgcagcatccgtgccgcacgcagggtgttcgaccaattgaagacgctctcagaggagacaccagatggaaggaggtgaggaagttgcttcctcgaactgaatttcgtagcactgagctaaactgaatgcataatttcgagttaatgattgtaactgtaagtgtaactttgattagcactcctgtcctgcagctacactcctcttctggatataatgcaagactgtgacttcttgacagaacttgtgcaacggatagagttttgccttgattatactctttctgtggtccttgatcgggccagcgataaactagcaacaatccgcaaggagaggaggaagaacattgatatgttagaatctctgttgagagatacatccacaaagatcttccagggtggtgggattgatagccctgttgtcactaagcgccgttctaggatgtgtgtcggtgttaaagcttcacacaagcatctggttcctggtggaattgttttgagttccagtggctctggcgcaacatattttatggagccaagggacgccatcaggctgaacaacatggaagtaaagctctcaggtgatgaaagagctgaagaattagcaatattgggtctacttacttcaagcatagctgactccgaaatgaagatcaggcatttgatggggaaaatattggaacttgacctggcttgtgccagaggttcatacgctttatggataaatgctgtgaggccagcctttactgacagggatagtgatactcaactgaatccaaatagtgaatgctcagtttttatcgagggcattcagcatcctttacttcttgaacagtctcttagtatggtaaaagaatcaaccagagtagggaaaggacagctttctgatgaacatcttgtctctccaatgcctattcctctggacatgcaggtgagaaacgatactaggataattgtgatctctggacccaacactggaggcaaaactgccaccatgaagacgttggggttggcctctctgatgtcaaaggctggaatgttcttcccagccaaaggaacccctaggcttccatggttcgatcaagttcttgcagatatcggagatcaccaggtagtctctgtcttttgaagagaatttctctaatcaattggggatgcttattgatgcaaactcttttctggattgaagtcgctggagcatagcctctctaccttcagtgggcacatatcacgtcttcgcaagattgtacaagttgtgtcaaaagattctctggttcttattgatgagatcggcagtggtacggatccgtcagacggtgtagccctttcaacaagcatcttgaagtatcttgctagtaggcttaatctggccattgtgacaactcattatgctgatctaagtcgtctgaaagctgttgacgatcgatttgagaatgctgcaatggaattttgtttggaaactctgcaaccaacatatcagatcttatggggcagtactggtaattcaaatgcattgagtattgccaagtccattggttttgatcagaaagtgcttgctcgtgcacaagaatgggttgagaaacttttgcctgacaaacagaaggaacgccaaggtttactctatggttctttgctagatgaaagaaaactactggagtctcaggcaaatgaagcagcatctgttctttcagacgttgagagactgtacaatgaggttcatctcttttactctattgatctgcttttgacttttccacagtatttatgtagaaggatcctctttgatgattttacttgaaatcttacttaataatattttgatatgaagattcgctctgaagctgatgacctggatagtcgagtagcagctttaagggcaacagagtctgaaaaggtgcaacaagagttaaagtttgtgaagtctcagatggaccaaataatcaagaactttgaatctcaactcaagaattcagaacttgaacagtacaattcactaatgagaaaagcagaagctgccactgcttcattggctgctactcaccagccaactgattttaccttcggtgatgaagaaaatgagagctcatatgttcctgaaatcggagataaagtgtacgttgaggggctgggaggaggaagtatggctagtgttgtcgagacacttggggaggatggtagctgtatggttcagtatggaaaaataaaggtccgtgtcaaaggaaacaagataaagctggtccaaagaggcacgaaggacacgtcagcctcctctcctgtaaaaggaaaggtgtgctttgcatcatccctgtattagtgataattatatatattagcattcaccataatctgttttgaatgttagaggtcaattagaggtgatattgttcgcaaattgaaatttatttcatgagataaatgtgataaaaagaactaaattgcaacaaatggtgtctcataacagttgtcatgattatcatagaatacattaggtcctcagaacttatcaagtaaatgtatgtattaaattatgtctcataacagttgtcatgattatcatagaatacaatggtcctcaaaacttatcaagtaaatgtatgtctaaaattgaacaatggatgcttgtttagcactcaccagttacacagcgtgcacgtgcagcatagacaaagattttgttcttaactcggtaaatctggtctacagattgctggcaagtgtagtgtatccagtttgtatgacatagtaggtagactctgggctggcatatgagtcttaactcttaattgagttgggcttcgtgtcacaatagattgatgtgttatttttctgaaatacttttgcgtgtattcgttctgtcggtcacgttgcatattaatatgtcaattcaaggaaaccaagttagcttgcggcctacagtgtgcattgaatctgacttgctagtattgatggtctccactttagtctgggcagatgcaacagatcgatagtaagctagctggacagtcaatggtccatgcaagtatgcaacactcttgtacatgcaccttaattaactctacaatcatacttaggcagcttatgattggtatggtcaacaacataaaatcgctgatcgttgactgttgtgttgtgttcttaatcttttgttttagcacagcttaaggccttgttctgatcagtcttataatctcatgtcagggacgaacaccgaagagatcagcagcagaagccaaccaagatggcaatgtctcctttggcccggttgtgcaaacatccaagaacacagtggatcttcggggaatgagagtcgctgaggcatctcatgagcttcagatggcaattgacgggtgcagaagttaccaggtcctgtttgttgtccatggcatgggcactggagctgtcaaggagtgtgcccttggtatactccgaaaccatcctcgagtagccaagttcgaagacgagagccctctcaactacggctgcaccgtcgcctacatcgaataagcacattatacggcttcatcgaaaacttatggcaaagatcgtcttatgcacacttgcacgatactagctggattatacaggattgtatgccacgtgagatgaaattttgaagccgtatggttgccatgtgacaactgatttggacaaggtggcccaggaactaatggagcttggagctgatctgtgcgctgatacaatgcacaatggtggcattcaagattagcctgtgagtacgaattcttgcatgtgttacctttgacttcttaatccatggcagatatatgcatagttttgtacaggtgaaagtcacacggtacttgagacagatctccgtacatataaactacacatgcgtgcagttcgttctgcagttgaaaaagattgtccggtttgttcagatcacgcatatcatattacaacttccatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0680700, RefSeq:Os04g0680700