Os04g0684200

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Revision as of 11:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0684200| Description = Similar to Protein kinase-like| Version = NM_001060843.2 GI:297603594 GeneID:4337452| Length = 6602 bp| Definition ...")
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Gene Name

Os04g0684200

Description

Similar to Protein kinase-like

Version

NM_001060843.2 GI:297603594 GeneID:4337452

Length

6602 bp

Definition

Oryza sativa Japonica Group Os04g0684200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:35342901..35349502

Sequence Coding Region

35343955..35343998,35344799..35344932,35345382..35345515,35345595..35345700,35346178..35346263
,35346689..35346877,35347204..35347368,35347962..35348075,35348332..35348577

Expression

GEO Profiles:Os04g0684200

Genome Context

<gbrowseImage1> name=NC_008397:35342901..35349502 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:35342901..35349502 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>agaggttcaaccgttctgcatggcctgacccgcggcagttcttggaagaagctaaatcagttggacaacttcggagcaaaggttagcaatttgcttggctgttgctgcgaaggtgacgagagattgcttgttgcagaatacatgcccaatgacacactagcgaagcatcttttccattgggaggcgcaagcaatgaaatggcccatgagattaagagttgttctctatctggctgaggctttagaatattgcaccagcaaggggcgtgctctgtaccatgatcttaatgcctacagagttctctttgatgatgactgtaaccctaggctttcatgttttggcctcatgaagaacagtcgagatggtaaaagctacagtaccaatctggcgtttactcctccagagtacatgagaactggacgtatcacacctgagagtgtcatttacagctttggtaccttgcttttggatgttcttagtgggaagcatattcctcctagccatgcccttgacctgattcgagatcggaattttaacatgctgacagactcctgtttagagggtcaattttcaaatgaggaagggacagaactagtgcgattagcttcaagatgcctgcactatgaacctcgtgaacgacctaatgtaagatctctggtgcaagcattggctcctcttcagaaggatcttgagactccatcttatgaactgatggatataccccgtggtggtgcaacatctgttcagtcattgcttctttctcctcttgctgaagcttgttccagaaaggatctgacagcaatacatgaaatcctagaaaagacgggctacaaggatgatgagggaacagcaaatgagctctcatttcagatgtggaccaatcaaatgcaagatacattgaactcaaagaagaagggtgacaatgcttttcgacaaaaggacttctcttctgcaattgactgttattctcagttcattgaagttggtacgatggtttctccgaccatttatgcgcggcgttgcctgtcatatctgatgaatgacaaggcagaacaagctctcagtgatgcgatgcaagcgctagtaatatctccaacatggccaactgcattttatcttcaggctgctgctctgctttctttaggcatggagaatgaagctcaagaagcaatcaaggatggttgtgcccatgagacaagtagcagcagtggacattga</cdnaseq>

Protein Sequence

<aaseq>RGSTVLHGLTRGSSWKKLNQLDNFGAKVSNLLGCCCEGDERLLV AEYMPNDTLAKHLFHWEAQAMKWPMRLRVVLYLAEALEYCTSKGRALYHDLNAYRVLF DDDCNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYMRTGRITPESVIYSFGTLLLDVLS GKHIPPSHALDLIRDRNFNMLTDSCLEGQFSNEEGTELVRLASRCLHYEPRERPNVRS LVQALAPLQKDLETPSYELMDIPRGGATSVQSLLLSPLAEACSRKDLTAIHEILEKTG YKDDEGTANELSFQMWTNQMQDTLNSKKKGDNAFRQKDFSSAIDCYSQFIEVGTMVSP TIYARRCLSYLMNDKAEQALSDAMQALVISPTWPTAFYLQAAALLSLGMENEAQEAIK DGCAHETSSSSGH</aaseq>

Gene Sequence

<dnaseqindica>1055..1098#1899..2032#2482..2615#2695..2800#3278..3363#3789..3977#4304..4468#5062..5175#5432..5677#agcctcaaccccaagccctccaaccccaagagaggccgcgccgcgagagagagagagagatccaatccaatccggcccccgtctccccccctcctccacgccgcggcgccgctccggttgcttgctcaggttggagtggtcgcgccgccgccgccgccgccgcgccgcgcctctcgattcggccgcgcgagcagatccgagcacccaacggcggccgctgcgcgcgggggggttcgaattctgcgccgctgccgttgcttcgcgtctcctttctcagggtgtgctgctctgttcgcttcctgcaggggggcgggctgctgatcgaaatgggcgggcgcgtgtccaaggcggtggcctgctgctgctgccgctcgcagcaccatggagtcgtcgtcgagagctcggagaagacgggtgcgtgatatgcttctctgcgccttccagaatgctctatctatccatccatctatctatctttccccctttttctgctgctatttttggagctcgctttcccttttccagaagctgtgggcgctcgcgatcttactttttatttgtcccccgagtttgctctattttcgcctagatatggccattaattcgttaaattgggtcgacatctccgcatttggaacgttgttaaactgactccggtagccattaatctgttccacctatccatttggtggtgatatctgcgttattatggtcaaactatttctgatttatgtgcgcctgtttacatattatatagcgtttctgctagtgatttgggggtgctgattagttttgttagttctgcatcttcgagtgatttttggctgcaagcttgtggtaatggagtaatttgagcggaatacatgtttatctgtagcggaggaggaccatggggagtcgtatgagctgccggcctttcaggaattctccttcgagcagctgaggctggccacctcaggctttgcggtggagaacatcgtgtctgagcatggtgagaaggcgcccaatgtggtgtacaaggggaagctcgacgcgcagcgtcgcatcgctgtgaagaggttcaaccgttctgcatggcctgacccgcggcagttcttggtatcctattgtcttcaccttaatccttttgcattgctaacgatgtgcgtttgcttggtgccaatggtagttgggtacgtggtggttattgtgggaatggtagattctgttctatttataagtgcatgaattggtttctaggtttgggttgtctcttatcatggaggttgttgatgtgtacctgttcctgagatgatatgcatgcttgttctttacttatttggcttttgggtggaatatgatggcttgcagttcaaattgtggcatctgccaactgtttgcacaacatatcttttttggtatgattattagattccaatactaaacaagtatcagacagcaatcattacagctagtagcaccatcattttgtggattacatgtttgattgctacatcactccattaattgctatgtgtgagttagtgtctcagtaattataaacttactattacctgttgttaacattatgtatttttgactgcattagttctagctcttcccgtggacaatgctttatatgccttgttattttgctaactgtcacatgttaattcaccaccatgccatttgtttctgattgctattgtacatactattaaaatggcaagtatagaggttttcttccacaactttaagcagcccattttccatattgatggcattttgttgtgtgagtggatggtggaatctacttcctatttgttgacgcaactttttgtttgattacccatatatttttgtggtaaattctctaagatcatctaataatccttttggtggaaacaactatgcttcaggaagaagctaaatcagttggacaacttcggagcaaaggttagcaatttgcttggctgttgctgcgaaggtgacgagagattgcttgttgcagaatacatgcccaatgacacactagcgaagcatcttttccattgtgagttgccatgcatttcttgtcgcatgccttagaacttttatgttgctgtcatcacatcaattagtaactgggttctgttcatggttacatttccgcatcatatataaataggatatctagagtagcaactgagagtaaattggacatgctgctttaatttcttttcataacactgttcaccatgacaattagtacttgccacgtgagagaagactatatgttcacttcaaagactcgtgtactctgtattggagctttctttttggcctctaagttcaccaatgcatctgaacttttggggagattccttgacatactttttccaacaatcgaaactgcatttcctgccatacatcttttataatgtcttgcattattaatgatgcaataccagcaatcttgaaattgatgtaatatttcaaacttattattgtatgatttcccaggggaggcgcaagcaatgaaatggcccatgagattaagagttgttctctatctggctgaggctttagaatattgcaccagcaaggggcgtgctctgtaccatgatcttaatgcctacagagttctctttgatgatgtgagtatcatatagattgtttttgtaacgtgatcatctgtgtgttttgtaacatttctatgttgtttacatggcacaggactgtaaccctaggctttcatgttttggcctcatgaagaacagtcgagatggtaaaagctacagtaccaatctggcgtttactcctccagagtacatgagaactggttggtaccttcttacttttcaaacatcgtaaagcttaattagtctttctttgtgagtgttataatctgcacatgatctttctggtcgtctaataacgttgttgcataccctggtttgaatcttattatcctttaacctttaaagttagtagggtcaacttttctctggagcattccaatactacgtggtttgaaattatgttaaatttttgcagcattttcataacttcctacattggattcttacagtttgaaccgtaatgattttcgtagtgcttctatccctttaaatgacgtttggtttgattttagcagaattgtacatctagaacccccccccccccctcattgtgcttggtggtgaattcatatttggtcaattgtgtctaagttcaagtgttcaactgctgtaaaatatgaagtcttgttacttttacattacaatttgtctcactcactcttttggtttacctgcaggacgtatcacacctgagagtgtcatttacagctttggtaccttgcttttggatgttcttagtgggaagcatattcctcctagccatgtatgcctttgagctttatttcatctagcaccattttacacttcctgcttttgcatcctgtcatgactgaatattttttttttctatatgcatccttgaaagaagtttagcaatttaaaaatataaatatgtacatacaataataaaagcataaatatgaatcctaaatatttcatatatacattatgtcattcacaatgtgtcaatactacttatttgtttagacttttgaaggatgaaaaataatattctcaaggaatctaagtaaaagataaccttttctttggaccactataaggacctttatcgcactatcaaggtcattaaggctgctacttagaacaatggatacagcaataaataagacttggcttcgcatatcttcatcttcaacagactaactaatatgagtgcaaatatgacaggcccttgacctgattcgagatcggaattttaacatgctgacagactcctgtttagagggtcaattttcaaatgaggaagggacagaactagtgcgattagcttcaagatgcctgcactatgaacctcgtgaacgacctaatgtaagatctctggtgcaagcattggctcctcttcagaaggatcttgaggtgaatatctttccacttccctttctcactatggcactgttgagttcaggtctcctaaaattatgttgagaaaattacgccatgaatttcaatttgttctatttcaacctatatatccaaattagttatttctatatctaaactcttcatatatttagtccctccctaagctttccacgactgacgccatttatgcttgtgtacattttttattctcagcttgaaagttaatctatcaaaatattataacagggtgattttggcatcctcattggacttgaagttctataatattgtaattgcagtaatgttgaaatattttgcagactccatcttatgaactgatggatataccccgtggtggtgcaacatctgttcagtcattgcttctttctcctcttgctgaagcttgttccagaaaggatctgacagcaatacatgaaatcctagaaaagacgggctacaaggatgatgagggaacagcaaatgaggttttagttttttttcccctcttctttactttctttagggtttgacatcattgccagtatgatttgtgtggtcttttcgtgagaatctttgtttgtatgtcaatcttgatggagcattctcagaatttacaagcaagcgaatcttttctataaaatcatttgtactgttagtcctcatgggctcattgcatcttttatgtcctacctcaagaaatattgttatcgatggcatgctgattgcattttgcttttttagatgtctgttggaatacattttagtgtaagaattctcttcatgttcatttcactttgatcctagagcaactatagttgacatgattttatgctgatctgcttgtcatctccttagttccagtgtgttaaagcaaaatagtcagttggaaagtcaccaaatattctgagtgtgacatttacatagttgcagcatgtgacgatgtgaaaccagttgtcagtcggatattgtgagtagttatatacgtagttgaaactttgtcatgctgaatgatttagcaaccatcctcgttatattgttatgctgttgcatgatccattgttttccttgtttgctgcagctctcatttcagatgtggaccaatcaaatgcaagatacattgaactcaaagaagaagggtgacaatgcttttcgacaaaaggacttctcttctgcaattgactgttattctcaggttgattttgcatctgtgtttatattctatatgggtttgtgagaagtgtcaggagagttgcatgatcaaatgtaattagtattcaacatagtatgaacagttccatttaatctttttttttttaaaaaaaaagtgtatgtgaaaacaacaatttctggaccgtgtgactatctgtaaacaccatcagtccattgaaaaggaaaaacttttaatcctcacagctatttttgactttgctcccatttgttgtatgcagttcattgaagttggtacgatggtttctccgaccatttatgcgcggcgttgcctgtcatatctgatgaatgacaaggcagaacaagctctcagtgatgcgatgcaagcgctagtaatatctccaacatggccaactgcattttatcttcaggctgctgctctgctttctttaggcatggagaatgaagctcaagaagcaatcaaggatggttgtgcccatgagacaagtagcagcagtggacattgaatatgactgaacaaatttgtagttcagaaaatgcacataacttcaggtatatgcttctaacaagtcctactactgaagtaactcagtagcccaagtaatcagtataagttcagtgtttggataaatgtgatgaatttgactttagctactaggttaatcataaggttgtaaacatctttgtgcaatgcagtttctgttgccatattgtggctcataacactaacaccaaatctgctaccatatttggtcacaaatggcatttactggtgtagccattaaatccatcagtgccatcactcggaaaaaacttatatgcaacctgaaatactgttatttgaacttacttagaacaggcttaagatgttctatgaacaattgatatttggaaggaaaacattaatataagtgaggtattgtttgccatctcttttaattcaccgtcattctgcttgtggcaggtgttttggtgtgaacaatcattggacatggaagcagctgttgttcatttgtcaatttggctaggggtttctttaaccttgttctgatttgcacgtgcggaaggtcgtccctcgtccatatgttcatgtaggatgtatatatggaagaaagcgacagcagaggccctgaaagagattgcaaagacattgaaggtgaataagtcctgcagacacgacattgatgggggaagggcaaaacttggtcttggttcctcctacccaagaaaatgggaaaacgaaaaaaaaaaagggattgttatcaaaaggcgttgttgatgtacatgtcaatcttgctggtaggcgtgtaaacttgtacagcaagcgttgtgttttctccaggtcatttttcttttctttttggttttgtttcatatgtgttagcccccattggtatattctagagaaaatcgtggaattcttgtcaggcg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0684200, RefSeq:Os04g0684200