Os10g0147900

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Revision as of 08:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0147900| Description = Armadillo-like helical domain containing protein| Version = NM_001070698.1 GI:115481139 GeneID:4348108| Length = 448...")
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Gene Name

Os10g0147900

Description

Armadillo-like helical domain containing protein

Version

NM_001070698.1 GI:115481139 GeneID:4348108

Length

4484 bp

Definition

Oryza sativa Japonica Group Os10g0147900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:2864303..2868786

Sequence Coding Region

2866623..2868605

Expression

GEO Profiles:Os10g0147900

Genome Context

<gbrowseImage1> name=NC_008403:2864303..2868786 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:2864303..2868786 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggagggggtgaaggcgatgctggcgcggccgatccagctggccgacgaggtcgccaagcagtgcggcgcggcgcggtgcttccgcgcggagtgcggcgagctcaaggcgcgggcggacaagctcgcggcgttgctccgacaggcggcgcgcgccgacctgtacgaccgccccgccgcgcgcatcatggccggggcgcagcaggcgctcctcaaggcctcctccctcgccgcgcgctgcgccagcggccacccgcgcctcaggcggctcttcacgctcagccccgccgcggggttcccccgcaccgtcgccctcctcgacaccgcgctcgaggacgtcgcgtggctgctgcgcatctcctcgcctcgctccggtggtggtggtggtggtggtggtggcggcggcgacgacgacggggacggcgacgacggcgacctgagggggctccccaacatcgcgcagaacgagcccatactgttcctcatctgggaccacgtcgcgcgcctccacaccggcgggctcgccgcgcgcgccgactccgccgccaacctcgcctccctcgcccgcgacagccagcacttcgccaagctcatcatcgaggaggacggcgtgccgccgctgcttaggctgctcaaggaaggcaccgacgacggccaggaggccgccgcccgcgcgctcggcttgctcggctgcgacgacgagagcatcgataagctcgtccaggccggggtgtgctccgtcttcgccgcggcgctcaaggatccacccatgcgcgtgcaggctgccgttgccgatgccattggtactctcgctgaccggagcgctacgtgccaggagctctttgcgcagaacaacgccgtccgctatctcgtcggtcacctcgcctcagggaccatccaggagcacagcaggtactccgtcggctccagcagctccaagaacagcgctgctgcacctcagcacatgacgtcgctgcactctgtcgtgcttgccaagacgctcagcatgcgccacggtggtgaccgtggcacctcctcctccaccgatgagcccccaagggtgtccaatgagcaagacacgaaaaggaatcagatgcagtcggtcgtgcaatccgcgatggctgctaagactaagacgaatgggtcgttggttccacccttcaggccacagctgggcacgagtggttctagtggccgtggtgctgtccgggaggtggaggatccggagaccaaggcacggctaaaggccatggcagcgagagctctgtggaagcttgcccgcggtcatctaggtgtctgcaagagcattactgattcgcgtgcactgctctgcttcgcggtgcttcttgagaagggtgatggtggcatgggtactagcgtacagtacttctcagcaatggcaatcatggaaatttcccgtgtcgctgagcacagccttgccctgcgacagtcggctttcaagcctagctctccagcagccaaggctgtcgtcgaccagctgcttcacattgtcagcaagggagactacgatgatctcttgctcccttgcattactgctcttggctgccttgcacgcactttcacagcgagtgagaaccgcgtcatcgctccccttgtggagctgctcgatgagcgtgagccaccagtcattaaggaggccgtgcttgcgctcaccaagttcgcatgcaatgaaaaccacctgcatgtaaaccactgcaaggccatcgtggacagcggtggtgctcgccaccttgtccagctggtgtatctcggtgatgaggtgcagatagaggcactgatactgctctgtttcattgcattgcacgtgccagaaagtgaggagctggctcaagctggtgtgcttgctgtgcttctctgggcatcaaaacaggctcacatgatacaggacatgcgtgtcgatgcactacttccagatgccaagggaaggctggaactcttccagtccagagcctccaggtga</cdnaseq>

Protein Sequence

<aaseq>MGEGVKAMLARPIQLADEVAKQCGAARCFRAECGELKARADKLA ALLRQAARADLYDRPAARIMAGAQQALLKASSLAARCASGHPRLRRLFTLSPAAGFPR TVALLDTALEDVAWLLRISSPRSGGGGGGGGGGGDDDGDGDDGDLRGLPNIAQNEPIL FLIWDHVARLHTGGLAARADSAANLASLARDSQHFAKLIIEEDGVPPLLRLLKEGTDD GQEAAARALGLLGCDDESIDKLVQAGVCSVFAAALKDPPMRVQAAVADAIGTLADRSA TCQELFAQNNAVRYLVGHLASGTIQEHSRYSVGSSSSKNSAAAPQHMTSLHSVVLAKT LSMRHGGDRGTSSSTDEPPRVSNEQDTKRNQMQSVVQSAMAAKTKTNGSLVPPFRPQL GTSGSSGRGAVREVEDPETKARLKAMAARALWKLARGHLGVCKSITDSRALLCFAVLL EKGDGGMGTSVQYFSAMAIMEISRVAEHSLALRQSAFKPSSPAAKAVVDQLLHIVSKG DYDDLLLPCITALGCLARTFTASENRVIAPLVELLDEREPPVIKEAVLALTKFACNEN HLHVNHCKAIVDSGGARHLVQLVYLGDEVQIEALILLCFIALHVPESEELAQAGVLAV LLWASKQAHMIQDMRVDALLPDAKGRLELFQSRASR</aaseq>

Gene Sequence

<dnaseqindica>182..2164#ctccaccaactcgcaactccaccaagcaaaccaaaaaccccaaatcccccaccccgaattcggaattcccccccaaatccctcgccgcccgccgattcagccccgcggagacgcgattctcgaaggaattctggttcccggaggcggagcaggcggagaatcgtttggtttttcttttgggatgggggagggggtgaaggcgatgctggcgcggccgatccagctggccgacgaggtcgccaagcagtgcggcgcggcgcggtgcttccgcgcggagtgcggcgagctcaaggcgcgggcggacaagctcgcggcgttgctccgacaggcggcgcgcgccgacctgtacgaccgccccgccgcgcgcatcatggccggggcgcagcaggcgctcctcaaggcctcctccctcgccgcgcgctgcgccagcggccacccgcgcctcaggcggctcttcacgctcagccccgccgcggggttcccccgcaccgtcgccctcctcgacaccgcgctcgaggacgtcgcgtggctgctgcgcatctcctcgcctcgctccggtggtggtggtggtggtggtggtggcggcggcgacgacgacggggacggcgacgacggcgacctgagggggctccccaacatcgcgcagaacgagcccatactgttcctcatctgggaccacgtcgcgcgcctccacaccggcgggctcgccgcgcgcgccgactccgccgccaacctcgcctccctcgcccgcgacagccagcacttcgccaagctcatcatcgaggaggacggcgtgccgccgctgcttaggctgctcaaggaaggcaccgacgacggccaggaggccgccgcccgcgcgctcggcttgctcggctgcgacgacgagagcatcgataagctcgtccaggccggggtgtgctccgtcttcgccgcggcgctcaaggatccacccatgcgcgtgcaggctgccgttgccgatgccattggtactctcgctgaccggagcgctacgtgccaggagctctttgcgcagaacaacgccgtccgctatctcgtcggtcacctcgcctcagggaccatccaggagcacagcaggtactccgtcggctccagcagctccaagaacagcgctgctgcacctcagcacatgacgtcgctgcactctgtcgtgcttgccaagacgctcagcatgcgccacggtggtgaccgtggcacctcctcctccaccgatgagcccccaagggtgtccaatgagcaagacacgaaaaggaatcagatgcagtcggtcgtgcaatccgcgatggctgctaagactaagacgaatgggtcgttggttccacccttcaggccacagctgggcacgagtggttctagtggccgtggtgctgtccgggaggtggaggatccggagaccaaggcacggctaaaggccatggcagcgagagctctgtggaagcttgcccgcggtcatctaggtgtctgcaagagcattactgattcgcgtgcactgctctgcttcgcggtgcttcttgagaagggtgatggtggcatgggtactagcgtacagtacttctcagcaatggcaatcatggaaatttcccgtgtcgctgagcacagccttgccctgcgacagtcggctttcaagcctagctctccagcagccaaggctgtcgtcgaccagctgcttcacattgtcagcaagggagactacgatgatctcttgctcccttgcattactgctcttggctgccttgcacgcactttcacagcgagtgagaaccgcgtcatcgctccccttgtggagctgctcgatgagcgtgagccaccagtcattaaggaggccgtgcttgcgctcaccaagttcgcatgcaatgaaaaccacctgcatgtaaaccactgcaaggccatcgtggacagcggtggtgctcgccaccttgtccagctggtgtatctcggtgatgaggtgcagatagaggcactgatactgctctgtttcattgcattgcacgtgccagaaagtgaggagctggctcaagctggtgtgcttgctgtgcttctctgggcatcaaaacaggctcacatgatacaggacatgcgtgtcgatgcactacttccagatgccaagggaaggctggaactcttccagtccagagcctccaggtgattttggcagcaagaccagcagacatgggttagtaatttctttgctgcaatgtgtaattagagtagattttttttttctgttgttcatgattgttctatcggagttttgttctccgtaggttgtacaaatctctagcaatcaatctgtcagtaaaattggttgggattattgaattgtaattcaagaggcattttaaacagattatatgtgtacctgtaaagttggccaaaaatttagctgattgtttttcttgttacttctgtctagttggattgcaagagtgggattctgaagctttggttcctgaccaggctatttataacttttaagcaatttcacattattcagcttcaaaaacaaaagaaaactacacatttaataccaaatttatcacaaaactacacatttaaaatgaagtgtcacaaaactacatgtttagtaactaaattatcataaaactataggcttagaaccaatttaggaacaaaataataatgtgtatagctccaacataacaacggttctagggatttaaactctaaaagctgtagttttgtgataacttcaatattaaatattcagttttgtgatgttaaccttaaatctgtagttttgtgataaattttgtgctaaatatgtagttttgtgacagaacaccttaaatctatagtttcgcgatagtttggtcaaaatacctgtagttctgggaaatttactcaaaatcaaaacactagcatataagtcaactgctcatctacaatttttagaagcatgggaactccaagaaaattgttttaagaaggatcttgcatatcatggtgccctacatattgcgtatgaaaattaattttgattgttttgtattggcagatgcagattgctgaatatgtgattgattttaatgttgcagagcatccctagattgtttttatatattgctactttgttatttttcaaacttatcctactcatatttggagtttggacatttcttcatcgttcaccctgtccaatatgtctagatatttatttatgcttttagcaatgtgctatattagcatttatcagactaaggaacagggcacatcaacaaacagttgatagctgggtcaatactcaatacaacatgtgatttaaaaatactcttgcattttcagtgtatatagacaaccatcattgatacatattttgttatcacaacatgctgaaggttgacgtacaatccgtgtactctaaaagttgaccaacattatttacctatatcagccgtgcaactgctaggtgccttgcttttgtcagccaacttcaccaagtcaatcagttcttgttttagaccttggatcctgtaataaatcgtaggccttataagtacaattgttattcttataaacaaaagtaataataacatcaacaaatggcattgacaataatgtagttctcttttgtttcttcttttattggcactagtatagtgggtttttcgttttatttttgttttacattttttgaaaatgacagctgtacttttgatattgctggatagaacttctcttctgctattcaagcgtcatgtttgtcctattctctccttatctatataatgttgacaagagcaccaccacatgtacaaaacatcaaagtttcccataccagatgacaccaacttacccagctgacaccgacacctgggccccactggaagtcgcaatccagaggagccggcgtgttattgtcagttcttacccaggtgatcagtgtggccaatcaagtgaagcctgctcacctccgcagttcccggggatggcgatgccacactgcttggtgacatagaacaccttatccatgttgatgttgtccctgacgcctgggctgcccaggtaggtgcagacgcagggcacgttgacgcccttcatggaggtgcagcagtcaggtgatggctgcagcttcggcccgtccttctcaacgaacttgtagcaggttgtcttcagcacctcgacatcgttctggcattctgtacctgccgctgctgctgcagtggtgaacactgccaggaggaagatcagcagtgcagccaggctagaagacttgagctgagacatcctggtatgtgttgttctttctgatatcttgaacttctctgattaaaacttggaaacttttgatttgtgcaatgcaaatatttatagagcttttggtgcctgaggttgtcatgctccattcttgcttgggctagttgagcatttcgtcctgcactggtaaccatagaaatgcaatgcttgtgacttgtgaggtgaatggttcatggctacgtgtttgattt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0147900, RefSeq:Os10g0147900