Os04g0685400

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Revision as of 11:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0685400| Description = Harpin-induced 1 domain containing protein| Version = NM_001060853.1 GI:115461435 GeneID:4337462| Length = 1419 bp| ...")
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Gene Name

Os04g0685400

Description

Harpin-induced 1 domain containing protein

Version

NM_001060853.1 GI:115461435 GeneID:4337462

Length

1419 bp

Definition

Oryza sativa Japonica Group Os04g0685400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:35410868..35412286

Sequence Coding Region

35411212..35411874

Expression

GEO Profiles:Os04g0685400

Genome Context

<gbrowseImage1> name=NC_008397:35410868..35412286 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:35410868..35412286 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcggtgatcaaggattgtggggggcacaaggggtgcgagtgcgagaaggagaaggtgcaccggcggctgtgctgggcgctggtggcgctggtgctcctgacgctcttcatcgtgctggtggtgtggctggcgctgcggccgcacaagccgcggttctacctgcaggacctgtccgtgctgtgcctcaacgtgacgccgccggcgtccgcctacctcttcaccaccatgcaggcgacggtggcggcgcgcaacgacaacggccgcgtgggcgtctactacgacaaggtggacgtgtacgcgcagtacaaggacgtggccatcacggtgccgacgaggctccccgtggagtaccagggccactacgaccagtccgtctggtcccccttcctccaatcgctcgaccacgtcgtcctcccccccaacctcgccgtcgccctcgcccaggacgagaccgccggctacgtcctcgtcgacatccgcctcgacggctgggtccgatggaaggtcggcacctggatctccggccactaccacctccgcgtcaactgccccgccctcctcaccgtcaacgacggcaagggcagctacggcgtcaactacggcggcggcgatggctacttccgcttccagcaagcagctgcatgcgccgtcgatgtctag</cdnaseq>

Protein Sequence

<aaseq>MSVIKDCGGHKGCECEKEKVHRRLCWALVALVLLTLFIVLVVWL ALRPHKPRFYLQDLSVLCLNVTPPASAYLFTTMQATVAARNDNGRVGVYYDKVDVYAQ YKDVAITVPTRLPVEYQGHYDQSVWSPFLQSLDHVVLPPNLAVALAQDETAGYVLVDI RLDGWVRWKVGTWISGHYHLRVNCPALLTVNDGKGSYGVNYGGGDGYFRFQQAAACAV DV</aaseq>

Gene Sequence

<dnaseqindica>413..1075#gtatcgacgaaaggcgttttctccgagtccttaacaaaacttgattacctttcaatcaatcatagcttcttttggagcttaccactcaccaccatcgatcaccagctccaccatcataatccacccctttgagacatacaccatgcttacaaagctgaaattaagttaagcagcaggcgaccgtgcaaagtctagtaagccacccaaaagtgagcagcagcaaccaacaactgaacctaccctgctctgctcacactgtcagccgatgctgatcacctccttccaatcaatcaacctgccattgctgtacatgagccacaccaccatctgagctcatatataaaccccctccccacccgctgccgcgacctcctcccagccatttcgatcgatcaaggagagcaaagaggggatgtcggtgatcaaggattgtggggggcacaaggggtgcgagtgcgagaaggagaaggtgcaccggcggctgtgctgggcgctggtggcgctggtgctcctgacgctcttcatcgtgctggtggtgtggctggcgctgcggccgcacaagccgcggttctacctgcaggacctgtccgtgctgtgcctcaacgtgacgccgccggcgtccgcctacctcttcaccaccatgcaggcgacggtggcggcgcgcaacgacaacggccgcgtgggcgtctactacgacaaggtggacgtgtacgcgcagtacaaggacgtggccatcacggtgccgacgaggctccccgtggagtaccagggccactacgaccagtccgtctggtcccccttcctccaatcgctcgaccacgtcgtcctcccccccaacctcgccgtcgccctcgcccaggacgagaccgccggctacgtcctcgtcgacatccgcctcgacggctgggtccgatggaaggtcggcacctggatctccggccactaccacctccgcgtcaactgccccgccctcctcaccgtcaacgacggcaagggcagctacggcgtcaactacggcggcggcgatggctacttccgcttccagcaagcagctgcatgcgccgtcgatgtctagctgtgtcttctttcttcatttcctcctcctccttctcttcttctttttaattagtttcacggcttctcttcttcttcttgcttaatttttctcaccggaatcaatcatctcatatcaatgaagaaaaaccgatcgatgatagtactagcttcttaatttagaccgtagttggtttggagctagtgtagcttggagtgaaagggaaaattggggtattctgaaaagatgcataatagacgtacagctgggagtagacgtgaagtgtctgcataattcgatttgcatttggcaataattatattccaatgtgagtacatcaataattaaaaaaaatgttcatatgt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0685400, RefSeq:Os04g0685400