Os04g0685800

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Revision as of 11:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0685800| Description = Similar to Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase (EC 3.6.1.17)| Version = NM_001060857.2 GI:297603602 Ge...")
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Gene Name

Os04g0685800

Description

Similar to Diadenosine 5',5-P1,P4-tetraphosphate hydrolase (EC 3.6.1.17)

Version

NM_001060857.2 GI:297603602 GeneID:4337466

Length

3453 bp

Definition

Oryza sativa Japonica Group Os04g0685800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:35434761..35438213

Sequence Coding Region

35434762..35434978,35435080..35435132,35435214..35435306,35435482..35435579,35437161..35437275
,35437352..35437444

Expression

GEO Profiles:Os04g0685800

Genome Context

<gbrowseImage1> name=NC_008397:35434761..35438213 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:35434761..35438213 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tccgtcgcacgcctccccccaatcctcgtgagccctatccgattccgcaccaccgctactcgccgccgtctcctcccctcctccgcgctccgcctcacccgcccgctctcctcctcctgctccgcgtcgccgctcgccgtcgtagcctccatggagacgccgccggagaactaccgcaccaacgtcggcatctgcctcgccgacccctccctcaccaagattttcaccgcgtccaggatcgacatcgccaacacatggcagatgcctcagggtggtattgatgcgggagaggatccgagggaagctgctttcagagaattgagggaggaaacgggtgttacatctgcagaaatggtggctgaggtccccgtttggttaacgtatgatttccctgttgatgtgaaagaaaagctgaatgctaggtggggaggaacgaactggaaaggacaggctcagaaatggtttctatttagatttactgggaaggaagatgaggttaaccttaatggtgacggatctgagaggccggagttttgtgaatggacatggatgacacctcagcaagttattgaaaaggcagttgaattcaaaaaaccagtatatgaggcagccctgaaacactttgccccatatctacagtcagatccagcaactacaacttcatcatag</cdnaseq>

Protein Sequence

<aaseq>SVARLPPILVSPIRFRTTATRRRLLPSSALRLTRPLSSSCSASP LAVVASMETPPENYRTNVGICLADPSLTKIFTASRIDIANTWQMPQGGIDAGEDPREA AFRELREETGVTSAEMVAEVPVWLTYDFPVDVKEKLNARWGGTNWKGQAQKWFLFRFT GKEDEVNLNGDGSERPEFCEWTWMTPQQVIEKAVEFKKPVYEAALKHFAPYLQSDPAT TTSS</aaseq>

Gene Sequence

<dnaseqindica>2..218#320..372#454..546#722..819#2401..2515#2592..2684#gtccgtcgcacgcctccccccaatcctcgtgagccctatccgattccgcaccaccgctactcgccgccgtctcctcccctcctccgcgctccgcctcacccgcccgctctcctcctcctgctccgcgtcgccgctcgccgtcgtagcctccatggagacgccgccggagaactaccgcaccaacgtcggcatctgcctcgccgacccctccctcaccaaggcaagcggcgctcccgactccactcccgcgacctaacccctcctcttcgtcggtgcttcaactgaccaattttttccgtgtgctctctcctctgtccccagattttcaccgcgtccaggatcgacatcgccaacacatggcagatgcctcaggtgaggtgatgaacaactgctcctatgttttgtctcgagaggttgttgagtgttaatccgcaagtgcgatgttcgccacagggtggtattgatgcgggagaggatccgagggaagctgctttcagagaattgagggaggaaacgggtgttacatctgcagaaatggtggctgaggtcagctattggcctttcgcccactcccaaacttcttctgtttcacgcaaacggctgctaattgcttgcaaacctgcagcgtctctcctaatactgcgtgtttatgatacttgtttgtcataatcagtctcgtaactagttttgctgactgagttgcatgtatatgttcatgtaggtccccgtttggttaacgtatgatttccctgttgatgtgaaagaaaagctgaatgctaggtggggaggaacgaactggaaaggacaggctcagaaatggttagccttctcatttccttgggccaacaatgatgctagtaaccaacatttgtgtggtatctgtttagacctgcaagaatagtctgacaagaattatctgataaacagccatatggttaagatagtatggtaattgccaggcagaaactcacagttatgactaaagagtgccagattgctcttgttctaagtctctgtgctagagaaacactgtcttgtccacgaagtgtaccggtttagcgattttcgtgctaaatatgatattgattaagttataagcaccataactactataaatagtatatgtaaaatgtggaaaatcatctatgccacagctgcagcatacatgttacacctcactttcctagaaatgatactatacctgtcggaagcctatgccagcaccttaaacctagtgctcttagaatgtttatatagattgaaccttgagctgccaatgaatcatattttcctggctgcgcccatatgtgtgtgtatcagtatatgttacacttgacacgcttgtattgcacagtgtgcacacacatgtgattgtccagttctccagctgtagcgcattggaaagtttcaatctatctagagtgcttacagcttcaaataggaagcttcaatctatcaggggcaaaaattcaaatagaaagcttcttggagaggggctgggtacagaaatcagaagagccactaaactgtgagagatggacagccaaatctatctaccccgtttacactcgctccaaaggatcatacttgtgctgagccaatgtttctgtgttgcatcctttggtaggaagcttcttttttatttttgtccatgatatgtagcataccatacagtctcagacagctagatagtcccatacttagtggaagtgtggaaaaggtccttcagttcagtgtttgttatggttcgtgatccctcagatagattggctgtaactcttatataagtgttttctgtgtgatctctggataaaatctgataattttggtagcctccagtagatacctgtcctaaaagctcaaattactgatataaattggtggctggtagtttgtatggtatcaacttcacatatctcacactcttacttttacgccaaggataggcctgggcccagacatatcattttgtcctatcctagacattaataagtgaaaagcccaccaaatttgtcaggtaagtatgtttgtgtaatgcccatgcgcagcattcaaatactaatagtgtgtctgtaagctataaactattactcacatgtcttcaacacttcatgattccaaagtgacttgtgaaccatttatgaaggattgtggcccatttatgccatcactttacatctttcacactcattcacttaggccaggggttgggcctgggctcatacttgttatttaggcctaggatagacttgactaaatcacaagatcacaactttctaagacatggtttgattatgttaatgcaatgtgcaccattgaaatgccaatagaaaaaggataatacccacttgtctttgtgatccacaagtaacttgtgaacatatgggtgcaaataaacaggtttctatttagatttactgggaaggaagatgaggttaaccttaatggtgacggatctgagaggccggagttttgtgaatggacatggatgacacctcagcaagttattgaaaaggtgggtctgtttaccagctcaatgtttttctgattccctgcttctgtagtatctgatataatttcatattgagcaggcagttgaattcaaaaaaccagtatatgaggcagccctgaaacactttgccccatatctacagtcagatccagcaactacaacttcatcatagctgcaacgaatttcctgaagttctttatatagagcgctctcatgttgccatagatccacaataatttattagtatgaattaacggatgctagtatctttgaatacttggcattatcctgacaattattatcccaacattggatcgaagtgtgcaaactgatacaataattatcttgttactttactccgtaccgtatttctacctccaacatcctctcagtatggaattcttagaaaaggaccagagagtttctttgacaacaaatatcaaggcatgaaggttgctgtggcttttgttgtgcgaggacaaactgccctttatgctttgtactgtgtcatgatattgtcccctatagagaaaaggaaatgtggttaggaagatgtattgcttgctcctccacctccagatgtggctctgattgtacaagatttggagtaccagtagcagcatgaagtgtggggattcttaaatgccaataaaggttgacctcgagcattggtgaggaaagcaagtcgactgaatttactagtccctcatgaactgctttatttcatgtgtgtctgcttcttttccctcatgaacttgcgcaggcttgatgcctgctagtagtagtgtactagtaccttactaacttccaccccttttctttcgtgaaccatttaactgctgtggtgtttagacagaataactgaactgaacacaaaagtagagtattgtactacttgtatttacaccctgaagatggattatttgggtatcttcaatgct</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0685800, RefSeq:Os04g0685800