Os04g0687800

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Revision as of 11:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0687800| Description = Protein of unknown function DUF6, transmembrane domain containing protein| Version = NM_001060869.1 GI:115461467 Gene...")
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Gene Name

Os04g0687800

Description

Protein of unknown function DUF6, transmembrane domain containing protein

Version

NM_001060869.1 GI:115461467 GeneID:4337479

Length

3158 bp

Definition

Oryza sativa Japonica Group Os04g0687800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:35567696..35570853

Sequence Coding Region

35567703..35567896,35568348..35568410,35569567..35570548

Expression

GEO Profiles:Os04g0687800

Genome Context

<gbrowseImage1> name=NC_008397:35567696..35570853 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:35567696..35570853 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggccggcgaggtggtgcaggggctgaagccggtggcggcgatggtggtggtgcaggtggtgttcgccggagtgaacatattctacaagctggcggtggtgtgcgacggcatggacatgcgcgtcctcgtcgcctaccgctacctcttcgcctccgccgtcctcgccccgctcgcctacttcgtcgagaggaagaacagaacaaagatgacgtggagagtgctgatgctgtcgttcgtctgcggactctccggggggtcgctggcgcagaacctgtacatctcggggatgaagctgacgtcggccaccttcgccaccgccatgaccaacctcatcccggccgtcaccttcgtcctcgccgtcctctgccgctacgagcgcctcgccatccgcaccgtcgccggccaggccaaggtcgccggcacgctgctcggggtcggcggcgccatgctgctcaccttgtacaagggcgccgagctcaacccctggcacacccacctcgacctcgtcgccgccctggaggcgcgccaccccgccgccgccgccgccaccgggaataacgaccgcgtgatcatggggtcgatgctggtggtgggcagctgcgtgttctacgcggtgtggctgatcctgcaggcgaagctgagccgcgagtacccgttccactacaccagcacggcgctgatgtgcgtgatgagcggcgcgcagtcggcggcgttcgcgctgttggtggacagggagcccgcgcggtggcggctggggctggacatccggctgctgtcggtggtctactccggcgtgctggcctccggcgtgatgctggtggtgctgtcgtggtgcgtgaagcggcgcggaccgctgttcgcgtcggtgttcaacccgctgatgctggtggtggtggccgtgctggggtccctcctgctcgacgagaagatgcacgtcggcaccctgctcggcgccgccctcatcgtcgtcggcctctacgccgtgctctggggcaagggacgcgagaccgccctcgaggccgccaaggtcggcgacgacaacgataaccaccacatccacgtcgtcgtcgtcgtgccgccggaacaagcgcagccgcagccgcaccaacaagcggaagctgatgctgatgccacgacgacggcatgcgaacaaccatcggattcggaccgggcgaatattgcatcctctttacgacacagccatagatacttccatcgttcttgcgggttttaa</cdnaseq>

Protein Sequence

<aaseq>MGAGEVVQGLKPVAAMVVVQVVFAGVNIFYKLAVVCDGMDMRVL VAYRYLFASAVLAPLAYFVERKNRTKMTWRVLMLSFVCGLSGGSLAQNLYISGMKLTS ATFATAMTNLIPAVTFVLAVLCRYERLAIRTVAGQAKVAGTLLGVGGAMLLTLYKGAE LNPWHTHLDLVAALEARHPAAAAATGNNDRVIMGSMLVVGSCVFYAVWLILQAKLSRE YPFHYTSTALMCVMSGAQSAAFALLVDREPARWRLGLDIRLLSVVYSGVLASGVMLVV LSWCVKRRGPLFASVFNPLMLVVVAVLGSLLLDEKMHVGTLLGAALIVVGLYAVLWGK GRETALEAAKVGDDNDNHHIHVVVVVPPEQAQPQPHQQAEADADATTTACEQPSDSDR ANIASSLRHSHRYFHRSCGF</aaseq>

Gene Sequence

<dnaseqindica>8..201#653..715#1872..2853#aaagaatatgggggccggcgaggtggtgcaggggctgaagccggtggcggcgatggtggtggtgcaggtggtgttcgccggagtgaacatattctacaagctggcggtggtgtgcgacggcatggacatgcgcgtcctcgtcgcctaccgctacctcttcgcctccgccgtcctcgccccgctcgcctacttcgtcgagaggtccctccctaatataattccctcttctcttctcttctcttcttttcttgagactattattgatcgagttgtttgcattatacaatatatttctacaacttcttcaattcaaagataccagtatttctttattatttttcctaaaattaagtatctccctttctgtataacatcacttgaataattatttttttttgttttccttcacgaccgccccatgcatgaattgaatgaatgcaagttttattctgtggcgaaaattaattaaaccatcagccttttgctgcgaataaaaatcaatggcccagctcactcatcctagctttttctctgcctacatatatatgcatgttttattttaaataatttgtttattctgtggttagtcaattactgaaacaatagcatatatgcaatctgttaattttaggtatgtgtgtgcgtgatgcaggaagaacagaacaaagatgacgtggagagtgctgatgctgtcgttcgtctgcggactctccgggtaattgtttttattcaatcacgctgactgtactaaagtactaacatgcagttaattagctacatatatatagtactcctactagaatttcacttaactatatagcgatacccaattcatcgagataattaggcgttaattagctttcaatttgaatgcccatgctgcttaattagctactactccagctggctatatatactcgaggtcaatggaggctaagcatgtgtgtttttggtcggtgggcccgtccgtcacgaggtgcttgccgatgccggctgacaaaaacgtttggctgcctcaccaccatcctttactctacatatatagtacgttgcttatatattttctctgcataaaaaaaaaaagcaatcaagcatcgtctaaagcctaaagatagatggatggatggatggcgcacatgtacatgacagaagcggataaccacttagttattggacaacacaaattaaccacaagcttaattagctactacctccagtttgaagttcaaactaattttaccttgttaattaatgccatatatatgctaccacgtactactagcagtagcagctggtacgtaccttcctgtgtttgaaggtaagcgttaagtgtttgtgttgcacacgtcgatcggtcttcactttttccttgcttcttttgcactttagtttccactatcatatactgctaatggaaattccatccaacacactgcatgctttctttaattttgacccttaattgatctctaattaatcaaaaccattagaagtaacgtgacgttggcagcatatatatatatacagccacgcacgcagctgtgcacacatcgatgctgacgatggcgtacgccctagctaagttaactgactagtaggagtaggttgcacacttctaggaatgctaatccattcacccacgtacgcgcgcggtgtccgtacgtatgtacatacgtatcacacggacctcgatcgatctgatacgtatacgtacgtacgtgtataattagctacgtacatacctagtggaggaatacgtgtcaccgagcttcaattctcggtgtcagtgcctgctgacgtgtagttgaattaatttgtggtcgatctggtgtgcatgcatgctgacgtgtaaggtaattacgtacgtgcagggggtcgctggcgcagaacctgtacatctcggggatgaagctgacgtcggccaccttcgccaccgccatgaccaacctcatcccggccgtcaccttcgtcctcgccgtcctctgccgctacgagcgcctcgccatccgcaccgtcgccggccaggccaaggtcgccggcacgctgctcggggtcggcggcgccatgctgctcaccttgtacaagggcgccgagctcaacccctggcacacccacctcgacctcgtcgccgccctggaggcgcgccaccccgccgccgccgccgccaccgggaataacgaccgcgtgatcatggggtcgatgctggtggtgggcagctgcgtgttctacgcggtgtggctgatcctgcaggcgaagctgagccgcgagtacccgttccactacaccagcacggcgctgatgtgcgtgatgagcggcgcgcagtcggcggcgttcgcgctgttggtggacagggagcccgcgcggtggcggctggggctggacatccggctgctgtcggtggtctactccggcgtgctggcctccggcgtgatgctggtggtgctgtcgtggtgcgtgaagcggcgcggaccgctgttcgcgtcggtgttcaacccgctgatgctggtggtggtggccgtgctggggtccctcctgctcgacgagaagatgcacgtcggcaccctgctcggcgccgccctcatcgtcgtcggcctctacgccgtgctctggggcaagggacgcgagaccgccctcgaggccgccaaggtcggcgacgacaacgataaccaccacatccacgtcgtcgtcgtcgtgccgccggaacaagcgcagccgcagccgcaccaacaagcggaagctgatgctgatgccacgacgacggcatgcgaacaaccatcggattcggaccgggcgaatattgcatcctctttacgacacagccatagatacttccatcgttcttgcgggttttaattaattaattactctagctagctcaggctcagctagctgctaattaattaactcgcacgtacgtacggcctgcttaatccatgatctctgttcgagggtaactaattaattaattaatcagcgcgagtacgtagaaaccaattaaccaatcaacaagaaacaaacaaacgagagcggtcgcgatcaacaagctatcgatcgaccgtgcgtacgtaggatatgcatgtatggtaggtaggagaggagattaaatatattgttgctctatctctgatcattaatatatacgtacgtacacatgcatg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0687800, RefSeq:Os04g0687800