Os04g0688000

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Revision as of 11:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0688000| Description = Protein of unknown function DUF793 family protein| Version = NM_001187227.1 GI:297723584 GeneID:9269370| Length = 14...")
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Gene Name

Os04g0688000

Description

Protein of unknown function DUF793 family protein

Version

NM_001187227.1 GI:297723584 GeneID:9269370

Length

1487 bp

Definition

Oryza sativa Japonica Group Os04g0688000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:35581987..35583473

Sequence Coding Region

35581987..35583313,35583430..35583473

Expression

GEO Profiles:Os04g0688000

Genome Context

<gbrowseImage1> name=NC_008397:35581987..35583473 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:35581987..35583473 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccggccaccgattcctcgtcggcggccgcgccgctcacctccttcggccgctccttcctctcccaccgccgcgaccagatccctcctcccccacccgaccaccactcccactcccacacccaacacccctcttcctccgacctcgagatcgacgccttccaccgccacgccgccgacctcctccacgacctcctctccgactccaactccgacccctccgccccggacctcctctccctcgcttggacgcgccgcctcctcgactccttcctcatctgcctcgaggagttccgcgctatcctcttcgccctcgctgactcccagcccctctcccgccccccgctcgaccgcctcctcctcgacttcctcgaccgcgccgtcaaggccctcgacctctgcaacgccctccgcgacggcctcgacctcatccgccagtggcgcaagcacctcgccatcgccgccgccgctctcgccaccgcccccgccgcgcagcgaggagaggcccagatccgccgcgcccgcaaggccctcaccgatctcaccatcctcatgctcgacgacaaggacgctgggggagtcgtcggacagcgcaaccgctcattcggcagcgccagtactactcggactcccttccccacggccacagccaccaccgccggagcagcagcggcgggagctccgggtccggctctggctcccatctcaggtcactctcctggagcgtctcccgcacatggtccgccgcgcgccagctccaggccatcgggggaggcctcacggtgccccgcgcgaacgacatcgccgccaccggaggcctcgcctccgccgtctacgccatgggcgccgtgctgttcgtcgtcacctgggcgctcgtggcagcaatcccatgccaggaccgcggcctccaggcgcacctcacagcggtgcccaggaccttcccctgggctggccccctcatcacactcttcgaccgcatcctcgacgagtccaagaagaaggaccgcaagcactcatgcggcctgctcaaggagatccaccagattgagcgctgctcgcggcagctcatggaggtcactgatgctgcggagttccccttggccgacgacaaggattccgaggtgcaggaggccacgcaggagctggtgcaagtttgcgggtcactcaaggatgggctggaccctcttgagcgccaggtgcgggagatgttccacagggttgtgcgcacccggacagaaatcctcgactacctcagtaggccgcacaacgccgggtgaggactcattgcttgatccaactttgtgtgaaatgcagccgctccaccgagcttgtgaatccttacttgagcagttcttcgtactaatggtctaa</cdnaseq>

Protein Sequence

<aaseq>MPATDSSSAAAPLTSFGRSFLSHRRDQIPPPPPDHHSHSHTQHP SSSDLEIDAFHRHAADLLHDLLSDSNSDPSAPDLLSLAWTRRLLDSFLICLEEFRAIL FALADSQPLSRPPLDRLLLDFLDRAVKALDLCNALRDGLDLIRQWRKHLAIAAAALAT APAAQRGEAQIRRARKALTDLTILMLDDKDAGGVVGQRNRSFGSASTTRTPFPTATAT TAGAAAAGAPGPALAPISGHSPGASPAHGPPRASSRPSGEASRCPARTTSPPPEASPP PSTPWAPCCSSSPGRSWQQSHARTAASRRTSQRCPGPSPGLAPSSHSSTASSTSPRRR TASTHAACSRRSTRLSAARGSSWRSLMLRSSPWPTTRIPRCRRPRRSWCKFAGHSRMG WTLLSARCGRCSTGLCAPGQKSSTTSVGRTTPGEDSLLDPTLCEMQPLHRACESLLEQ FFVLMV</aaseq>

Gene Sequence

<dnaseqindica>1..1327#1444..1487#atgccggccaccgattcctcgtcggcggccgcgccgctcacctccttcggccgctccttcctctcccaccgccgcgaccagatccctcctcccccacccgaccaccactcccactcccacacccaacacccctcttcctccgacctcgagatcgacgccttccaccgccacgccgccgacctcctccacgacctcctctccgactccaactccgacccctccgccccggacctcctctccctcgcttggacgcgccgcctcctcgactccttcctcatctgcctcgaggagttccgcgctatcctcttcgccctcgctgactcccagcccctctcccgccccccgctcgaccgcctcctcctcgacttcctcgaccgcgccgtcaaggccctcgacctctgcaacgccctccgcgacggcctcgacctcatccgccagtggcgcaagcacctcgccatcgccgccgccgctctcgccaccgcccccgccgcgcagcgaggagaggcccagatccgccgcgcccgcaaggccctcaccgatctcaccatcctcatgctcgacgacaaggacgctgggggagtcgtcggacagcgcaaccgctcattcggcagcgccagtactactcggactcccttccccacggccacagccaccaccgccggagcagcagcggcgggagctccgggtccggctctggctcccatctcaggtcactctcctggagcgtctcccgcacatggtccgccgcgcgccagctccaggccatcgggggaggcctcacggtgccccgcgcgaacgacatcgccgccaccggaggcctcgcctccgccgtctacgccatgggcgccgtgctgttcgtcgtcacctgggcgctcgtggcagcaatcccatgccaggaccgcggcctccaggcgcacctcacagcggtgcccaggaccttcccctgggctggccccctcatcacactcttcgaccgcatcctcgacgagtccaagaagaaggaccgcaagcactcatgcggcctgctcaaggagatccaccagattgagcgctgctcgcggcagctcatggaggtcactgatgctgcggagttccccttggccgacgacaaggattccgaggtgcaggaggccacgcaggagctggtgcaagtttgcgggtcactcaaggatgggctggaccctcttgagcgccaggtgcgggagatgttccacagggttgtgcgcacccggacagaaatcctcgactacctcagtaggccgcacaacgccgggtgaggactcattgcttgatccaactttgtgtgaaatgcagccgctccaccgaggtagcttctctgtaaaagttagcatctacatatacatgtctctgcatgaagaaggcctggccttagttatgatacatttgagttatttctttcattttttttctctccttttgtagcttgtgaatccttacttgagcagttcttcgtactaatggtctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0688000, RefSeq:Os04g0688000