Os04g0688100

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Revision as of 11:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0688100| Description = Peroxidase (EC 1.11.1.7)| Version = NM_001060872.1 GI:115461473 GeneID:4337482| Length = 1734 bp| Definition = Oryz...")
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Gene Name

Os04g0688100

Description

Peroxidase (EC 1.11.1.7)

Version

NM_001060872.1 GI:115461473 GeneID:4337482

Length

1734 bp

Definition

Oryza sativa Japonica Group Os04g0688100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:35587310..35589043

Sequence Coding Region

35587549..35588166,35588262..35588446,35588601..35588838

Expression

GEO Profiles:Os04g0688100

Genome Context

<gbrowseImage1> name=NC_008397:35587310..35589043 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:35587310..35589043 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtccaagctgggtatggttgtgctactgatctcgggcctctttgctgcccgttgcgcggccgtggtgaccaccggcgaacccgtcgtcgccggcctctcctgggggttctatgacacgtcgtgcccgtcggtggagggcatcgtgaggtggcacgtcaccgaggccctccgccgcgacatcggcatcgccgccggcctcgtccgcatcttcttccacgactgcttcccgcaggggtgcgacgcgtcggtcctcctgacgggttcccaaagcgagctgggtgagatacccaaccagacgctgcggccgtcggcgctgaagctcatcgaggacatccgcgccgccgtacactccgcctgcggcgccaaggtgtcctgcgccgacatcaccacgctcgccacgcgtgacgccatcgtcgcctccggcgggccctacttcgacgtgcctctggggcggcgcgacgggctggcaccggcgtcgagcgacaaggtgggcctcctgccggcgcccttcttcgacgtgcccacgctcatccaggcgttcaaggaccgaaacctggacaagacggacctggtggcgctgtccggcgcgcacaccatcggactaggccactgcggcagcttcaacgaccgcttcgatggctccaagcccatcatggaccctgtgctggtgaagaagctgcaggccaagtgcgccaaggacgtgccggtgaactcggtcacgcaggagctggacgtccgcacgcccaacgccttcgacaacaagtactacttcgacctcatcgccaagcaggggatcttcaagtccgaccagggcctcatcgaggacgcgcagaccaaccgcaccgccgtccgcttcgccctcaaccaggccgccttcttcgaccagttcgcacgctccatggtcaagatgagccagatggacgtcctcaccggcaacgccggcgagatccgcaacaactgcgccgctcccaaccgccgctcctccgacctcctcaacgctgccgacgacgaccaaggcttcgccgccgacgcctaa</cdnaseq>

Protein Sequence

<aaseq>MASKLGMVVLLISGLFAARCAAVVTTGEPVVAGLSWGFYDTSCP SVEGIVRWHVTEALRRDIGIAAGLVRIFFHDCFPQGCDASVLLTGSQSELGEIPNQTL RPSALKLIEDIRAAVHSACGAKVSCADITTLATRDAIVASGGPYFDVPLGRRDGLAPA SSDKVGLLPAPFFDVPTLIQAFKDRNLDKTDLVALSGAHTIGLGHCGSFNDRFDGSKP IMDPVLVKKLQAKCAKDVPVNSVTQELDVRTPNAFDNKYYFDLIAKQGIFKSDQGLIE DAQTNRTAVRFALNQAAFFDQFARSMVKMSQMDVLTGNAGEIRNNCAAPNRRSSDLLN AADDDQGFAADA</aaseq>

Gene Sequence

<dnaseqindica>878..1495#598..782#206..443#tcttgataatgtgctggcttgagcaatcaagccacaatcctagaccaacatactatgcacgtagtaggagtatacattatattccacttttccacaagatagggtccagtccagtatatatatagggcatggagagatggaccatttgcaggaggcagaggtcgagctgagagtgatcgatctttgttagctagagtgttgagcaatggcgtccaagctgggtatggttgtgctactgatctcgggcctctttgctgcccgttgcgcggccgtggtgaccaccggcgaacccgtcgtcgccggcctctcctgggggttctatgacacgtcgtgcccgtcggtggagggcatcgtgaggtggcacgtcaccgaggccctccgccgcgacatcggcatcgccgccggcctcgtccgcatcttcttccacgactgcttcccgcaggcacgtcctactaccattttactccagtagttgccggttcggttgatgcatggtgcctccttcttacagatggcaatacataaaaaaaaaacaaattaaataccgagttttagtaactacagtagtatattaacataattaattaagtgttcaggggtgcgacgcgtcggtcctcctgacgggttcccaaagcgagctgggtgagatacccaaccagacgctgcggccgtcggcgctgaagctcatcgaggacatccgcgccgccgtacactccgcctgcggcgccaaggtgtcctgcgccgacatcaccacgctcgccacgcgtgacgccatcgtcgccgtacgtctaattcttaattaataatgaacagtcgggatttttactcaagaactgaacaaattaacatatttaatttaattacatttacatggcagtccggcgggccctacttcgacgtgcctctggggcggcgcgacgggctggcaccggcgtcgagcgacaaggtgggcctcctgccggcgcccttcttcgacgtgcccacgctcatccaggcgttcaaggaccgaaacctggacaagacggacctggtggcgctgtccggcgcgcacaccatcggactaggccactgcggcagcttcaacgaccgcttcgatggctccaagcccatcatggaccctgtgctggtgaagaagctgcaggccaagtgcgccaaggacgtgccggtgaactcggtcacgcaggagctggacgtccgcacgcccaacgccttcgacaacaagtactacttcgacctcatcgccaagcaggggatcttcaagtccgaccagggcctcatcgaggacgcgcagaccaaccgcaccgccgtccgcttcgccctcaaccaggccgccttcttcgaccagttcgcacgctccatggtcaagatgagccagatggacgtcctcaccggcaacgccggcgagatccgcaacaactgcgccgctcccaaccgccgctcctccgacctcctcaacgctgccgacgacgaccaaggcttcgccgccgacgcctaattaacttatggagtaattagtgatcgttttatgtttatgttttgtgctagtaataataattaagaggatgccatctgcgcgtggtgtttggtttccatgcattctctgcttagttagaatggttttgcttcataaaaagtaaagttactactcgattcctcggtcgggacagagtaactgcatgtcaaatgtatcatcatcatcagttagtgctacatcatcacaactgtctttgtcac</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0688100, RefSeq:Os04g0688100