Os04g0690400

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Revision as of 11:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0690400| Description = Conserved hypothetical protein| Version = NM_001060886.2 GI:297603625 GeneID:4337496| Length = 6887 bp| Definition ...")
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Gene Name

Os04g0690400

Description

Conserved hypothetical protein

Version

NM_001060886.2 GI:297603625 GeneID:4337496

Length

6887 bp

Definition

Oryza sativa Japonica Group Os04g0690400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:35716954..35723840

Sequence Coding Region

35717221..35719373,35719549..35719635,35719871..35719886

Expression

GEO Profiles:Os04g0690400

Genome Context

<gbrowseImage1> name=NC_008397:35716954..35723840 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:35716954..35723840 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ggtagggtggtaagggagaaaattgcagatgcagatgcagatgcagtcgaggtctcgcattcgcggccgcgacccgcccccggcctcctcgggaggacgataccgccgacgatcgccctccccgcgccgccaccaccgcgctcccccctccaaccccaacccgcacagagacagacgcacccccgaccgcccccgcgccaccaccacgaggacagcctccctctccatgtccatctcccacccccacccgacgccctactcaccgccgccgccgaccgccgctcccgcgctgacgtccttctcgaggccggccgcctcgccgcccgctacctcgtcgcccagggcgtcatccccgagcaccgtctccgcgccagggaggaccccctccctgctgccaggaaccatgacgtcgacgaccccaggtcccgccggaatgccgacttcccccgcgacagaggggacgatgacaggctatcccgtagatccggctgggacaggaggagcaacagctttgacagcaggcgcaagtacaatgatgccgcctcagccgatcggagtgcccgccggagccacgactacgacgaccaaaggagaccaaccatgtcacgctcctattcacaaaacgaccgccgtgtctccagtgatagcaggctggatcgaagacggaggagcaggagcagaagcaggagcagaagcagaagcaggagcaggagcagaaccaggacaaggagctataactatggcagccggagggattcagattggcgagcatccggcgccgatttggatcattccaaggtgccagagcctggcattgtccgtgacggtgatgctgatgtgggatacggtgatgctgatgatgtgccaagagatctcaaggcacctccccgttcagtggttgttatggagacaaaagagagtgccagccaagctgcagccaatgaagacacagcagaggtggagtcagagatcatagaggtcgatcaagctcaagatatatatggggatgacgatgacgatggtgacgatgctgttgctgccttcaattatccaagcgttgctgaaataaatgttacccaacacaagctgtccaattccaacgaggatgttgttcatccatcacagtctgatgaggaaccactgcataggcagtcccagttcagcgatgctgaggagggcatggagggtccgatctctcccagggattcatgcttggtagaaccagtggccgaggaagtcagagatggaatggaggctccgcagagtgaagttgaaactgataacgcagaccttaccaaagatgaacaagacctgccagcttggtatgggatttttgacctcaatgttgtggaatctcaagaaaactgtgaaatggttgagatttccaatgattcgcctttagataatggtcgtgactctgttcctgatcaagttggtcagatgagccaaggagcaaactgcgtcacttcaggaactcaaggtcaagatgaacatgcatttgacaaccaccagtcggaggatgaacaagtgcctctaaatcaaagaaatggtacggatgattttaacaatgaacaaggggttggaaatcagacaggtgatgaacatggacaggataatcaccagttggaggatgaccagatgcatataaatcatgtcatggatgtgcatactttagataacggccttatgaacggtgaggaaatgcttctaaagcggtgtgcagatgagcacacggatcatggacacctggtggaaactgaagaaatgcttctgaatcaggggcagagtacctctgtacaagtgttggaaaattataatatgaatggagaacaggtgcagctcaatcatgatgctgatgaacattcaggcgatgatcgcccaataaagaatgagcaaatgcttttgaatcatgttatgggtgtgcatgatttggataatcatgaccagaacagtgaacaaatgcttctaaacaatggcgctggtaaacaggctgcagatagtgctcagttacaggaagaccagatgcttctagaccaggctgcagatggacaagctacgcttcacggtcagagcattggccaaatgattcctgtaatcaatctggaagatgattatgaagagcagtctgataccatagagttttcagaatccaaactaacgtcccagctgctgctgctgcttcatcagttaccctcaaccatggaaataggtggactagaaggggcgctactgttgcacaggaaatcccagcgatga</cdnaseq>

Protein Sequence

<aaseq>GRVVREKIADADADAVEVSHSRPRPAPGLLGRTIPPTIALPAPP PPRSPLQPQPAQRQTHPRPPPRHHHEDSLPLHVHLPPPPDALLTAAADRRSRADVLLE AGRLAARYLVAQGVIPEHRLRAREDPLPAARNHDVDDPRSRRNADFPRDRGDDDRLSR RSGWDRRSNSFDSRRKYNDAASADRSARRSHDYDDQRRPTMSRSYSQNDRRVSSDSRL DRRRRSRSRSRSRSRSRSRSRTRTRSYNYGSRRDSDWRASGADLDHSKVPEPGIVRDG DADVGYGDADDVPRDLKAPPRSVVVMETKESASQAAANEDTAEVESEIIEVDQAQDIY GDDDDDGDDAVAAFNYPSVAEINVTQHKLSNSNEDVVHPSQSDEEPLHRQSQFSDAEE GMEGPISPRDSCLVEPVAEEVRDGMEAPQSEVETDNADLTKDEQDLPAWYGIFDLNVV ESQENCEMVEISNDSPLDNGRDSVPDQVGQMSQGANCVTSGTQGQDEHAFDNHQSEDE QVPLNQRNGTDDFNNEQGVGNQTGDEHGQDNHQLEDDQMHINHVMDVHTLDNGLMNGE EMLLKRCADEHTDHGHLVETEEMLLNQGQSTSVQVLENYNMNGEQVQLNHDADEHSGD DRPIKNEQMLLNHVMGVHDLDNHDQNSEQMLLNNGAGKQAADSAQLQEDQMLLDQAAD GQATLHGQSIGQMIPVINLEDDYEEQSDTIEFSESKLTSQLLLLLHQLPSTMEIGGLE GALLLHRKSQR</aaseq>

Gene Sequence

<dnaseqindica>268..2420#2596..2682#2918..2933#acttacacacacaaacacacagagagagaccaaaagcaaaccctcgcctcgcctcgcctctctcaaccatcgtcttccaccgccgccgccgccaccgaacgaacgcgccgaccgaccgcgcgaagatctgggcagctgggacgagacatagggagtataacggaggaactgaagaaggagacaaacgccggatttaactccacggaacgggaacacattgctgctgctaccattcaagcttggactccggtctcctcctcctcctagggtagggtggtaagggagaaaattgcagatgcagatgcagatgcagtcgaggtctcgcattcgcggccgcgacccgcccccggcctcctcgggaggacgataccgccgacgatcgccctccccgcgccgccaccaccgcgctcccccctccaaccccaacccgcacagagacagacgcacccccgaccgcccccgcgccaccaccacgaggacagcctccctctccatgtccatctcccacccccacccgacgccctactcaccgccgccgccgaccgccgctcccgcgctgacgtccttctcgaggccggccgcctcgccgcccgctacctcgtcgcccagggcgtcatccccgagcaccgtctccgcgccagggaggaccccctccctgctgccaggaaccatgacgtcgacgaccccaggtcccgccggaatgccgacttcccccgcgacagaggggacgatgacaggctatcccgtagatccggctgggacaggaggagcaacagctttgacagcaggcgcaagtacaatgatgccgcctcagccgatcggagtgcccgccggagccacgactacgacgaccaaaggagaccaaccatgtcacgctcctattcacaaaacgaccgccgtgtctccagtgatagcaggctggatcgaagacggaggagcaggagcagaagcaggagcagaagcagaagcaggagcaggagcagaaccaggacaaggagctataactatggcagccggagggattcagattggcgagcatccggcgccgatttggatcattccaaggtgccagagcctggcattgtccgtgacggtgatgctgatgtgggatacggtgatgctgatgatgtgccaagagatctcaaggcacctccccgttcagtggttgttatggagacaaaagagagtgccagccaagctgcagccaatgaagacacagcagaggtggagtcagagatcatagaggtcgatcaagctcaagatatatatggggatgacgatgacgatggtgacgatgctgttgctgccttcaattatccaagcgttgctgaaataaatgttacccaacacaagctgtccaattccaacgaggatgttgttcatccatcacagtctgatgaggaaccactgcataggcagtcccagttcagcgatgctgaggagggcatggagggtccgatctctcccagggattcatgcttggtagaaccagtggccgaggaagtcagagatggaatggaggctccgcagagtgaagttgaaactgataacgcagaccttaccaaagatgaacaagacctgccagcttggtatgggatttttgacctcaatgttgtggaatctcaagaaaactgtgaaatggttgagatttccaatgattcgcctttagataatggtcgtgactctgttcctgatcaagttggtcagatgagccaaggagcaaactgcgtcacttcaggaactcaaggtcaagatgaacatgcatttgacaaccaccagtcggaggatgaacaagtgcctctaaatcaaagaaatggtacggatgattttaacaatgaacaaggggttggaaatcagacaggtgatgaacatggacaggataatcaccagttggaggatgaccagatgcatataaatcatgtcatggatgtgcatactttagataacggccttatgaacggtgaggaaatgcttctaaagcggtgtgcagatgagcacacggatcatggacacctggtggaaactgaagaaatgcttctgaatcaggggcagagtacctctgtacaagtgttggaaaattataatatgaatggagaacaggtgcagctcaatcatgatgctgatgaacattcaggcgatgatcgcccaataaagaatgagcaaatgcttttgaatcatgttatgggtgtgcatgatttggataatcatgaccagaacagtgaacaaatgcttctaaacaatggcgctggtaaacaggctgcagatagtgctcagttacaggaagaccagatgcttctagaccaggctgcagatggacaagctacgcttcacggtcagagcattggccaaatgattcctgtaatcaatctggaagatgattatgaagagcagtctgataccatagagttttcagaatccaagtaagcttttttagattctttttgtcacaacctcaagggggtgaggaaaatcctttgcacttgaacatgttcgctatacagaagtgacaccttacataaacttactgaaaatgttctaccagaacatatctgttctcaagggcaacaaacttcgagtattcctgaccatcctcagactaacgtcccagctgctgctgctgcttcatcagttaccctcaaccatggaaataggtggactagaaggggcgctactgttgcacaggtgagatggctgtttagctggtactcattgagtcattgttaattccgtcgattatttttcttgctgatggtaaaacgaattaggggttcacttgacatgagagagagggagggggggggcataatatttttgttcttgctgatattgcattttctgttgcatacataaatatgcatatctctttatgatttcccttgccacttaagatattataatgacactttccacatttcaggaaatcccagcgatgatgagttgatggcatgttgtatgttgctttttgatgaaatactgttaggtatgctctccttcttccataaacatgttgttttcatctcataactagcctattgacttccgcgttcatgcaactataacctcccttttaaaagtgtttatatgtttgtttatagtaattagtttaaaatggtaataacaactaacagtgtaaataagtgtttgtggaacatactttggcaggaagttagatataacattaacagatttatcttgatttgtaagtaaaaatattatcacaacaacaaataatttaccatagatttttttaccaaaatttaccatacattactgctgcgactattacctccctctttaatgattttctaaatctgtaatatgtagtaatgttgtaaataggtttgtaatctaaaatgcacatcccatctttcggctacaaaatggtgagtgcaacagctagggttagagtttccattcatcttctctttgccgtttattatttgttgccatcttcgccactgcatgagtcgccatcttcctggtgtttccaccacctctgcatgacccccttattcttcccttattttccattagcacacccgctttacagcctatgcacataattttgcaggctctcaaggaatttgtttaatcttatgtaaaatttatgcaagaattaagaaaattataccttttgaaatgacaagtttgaacttttaatttttaattaaacctatagcaaagcatatcactatgaaaccatcctcattttatttttgttggcaagtcttagagagattgctcttcatatatagatagggatggcaacggggctgcccctgtcgggttgtggtaccccgtccccacccccggacatactgaaatctcccgctccccgtccccgtccccggcgtcgggtgatgtattgctaccgtctccattctgcaccggggtttcaggggcccacggggcaacacacctggaaaaacgcaaaggccactgctcaacaaattgaaacaggaaggaacagagggtagagaaaaaatgaatcaattggaaggacagatttaggaagaatggcacacatacatatgaacgtatcaataggaagtaatcgattcattcgcacaaataatcatcacaagaacaaaataaatcaagaaatacaaaagaagaaatttttaaaaaaacaagtagcatgttcgcaacgcttggccgctgattccgcatcttgccgtttcatcttgcctgtgtcgccagctggaaagacttcatcaatggcagagcatgaaagactagaaggagatgaagacaccatgcagcggcggtggcggctgctgcacgcctgcatggtagtggtgacggcgacccgcgtgtgctgcttttggctgtggcgacggctgctcggccaggaggcgcgacggctgagcatggccgcggtcttacggagcctggcggcctcccgctgctgattggatctgagagagggtttcattgctttatatatacagtccaccaaattgggccttgagcctttatttttctattgtgggctgcgactgtagagggatgtgcacccccatggggattcagggccgggggcctgtggagcatccccgcccccggcctacccgacggatgaaaattttggccgataacatcccgtttacacccctaatggagtttttccccgttggatatcggggttcaggtccccattgccatccctatatatagaatttattatgtccttattctaagaaaactatagaatttattatacccataacatagtaaaattataacaaaagagtttagttagtttagtatgtctatgtcacagcaaatccatgctcatgccgtaatttctagttagaatttagcatgcacaatggtttaaaatcaaaacttgcaagatccttgacttaaaaatatgagtacgatgtaggggtattttcacaaatatttgtactatttagtggagtgcatgataagagatattaataggggctaaaatgaaaaggtaccaagagtcacaggcggtggatggctatcgtttttattctcaagggctctagttgcttctttacaccactgttttttctctctatatattttttaccatccatctgatccgatggttacaatgctctctcggtctctccctactttgttgtttactgaatcagacagccacatttttgttgcttacgtggctcatcctacgttttgggttccacctttcacctatttagatatgtttccttgatttcttggaacttcaacatatgagtatatgacttcatagatctacttgaacttcttttgtatcatgggtgtttgatctgagatacttgggtatagattccccacactgttttcttcctacagcttagacattcgtgctatgtgttatattttgatgactaaaacaccaacactgatgttttaggcacttgcactaataacaaacatatcagacattacttcatcacattgagtttgaaattaattgaaaatagataatgatggatgtatccagcctcctgaccatctgatgtgatagtggaatgctgaagaaacatgcatgaaattgcaatcagttttactatagcacctgctttagcgagaagcctggaaggcctggaatttgttcaattttcagtcagcgtgtctctgcatggccacacaaatacatgatatacaggcccaggatggtcattaaaaatgctgacaatgtttgtcattagttgtaattggtctggtttgcagttgcactaattcctgttgactatgactgatgtgctctggtgatgaatactatgtttttgtattaatcatctccccagttccatatagaaatgaaagatgttgactagacatgcttactaccttttcttctttgtctgtacctttttatactacttgcatgcttgtagatgatttacacaccacaacggttgagttctctagttcattgatctagattttttgcatacacggtgagtagttcattaatcatcagtcatgcttttctgtgtactccactttttgtaatgtaatgcaacatactttctcagtaccctgcttcattgactgaacctaattttggactgaaatggtgaagaaacatgagaatttttagttgtactttgcaataattgttaagagtccttcagctgttctttttgctatatgttacccataattaccagttcactaactccctttttatttcccagaggtaatcatcttgtattgtgggactgccatcctctgagcttgggaaatctttgtgaaccatgatgttcgtgttctcagctcctacgcttgagcttactgatatcctgaaccatgggaagctggcatgctgaagttggttgatcggtcatttgcttgtttgtatgttgtggtgtagtaagtagtaacaaattttgatccccagaggtcacaaattccatgctggtctagcgatgtgttagtagctgggtagctctaattttactgcgaacaatatgaatcatgttcgtctaacaaaattctctgctgcctttgtgctcctgcttttgctttgtgaagcgcaaaaggacagtgaagctctgtgtcaccgtgcagctcatcaggcagagatggttcatggctggctgcacggaatctagcaacagtcacttgattccgcgccgccgacctaacaagagagatggagctgttgattgcaacagcgtctaaattcagagtgcacacaatgcggtgctttggtacaacgcaattggatatttggatggatgctatttggatggtaatgacaaatgcacatcaacggcatattctcctgctgcactgcatacatcattcaaggatctctgaaaggaaacatgaacataaaacagcaagtatgtttgtaatgtagtatgtatataccgtgtcaattgttgttttgttgtgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0690400, RefSeq:Os04g0690400