Os04g0692100

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Revision as of 11:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0692100| Description = Similar to Tubulin folding cofactor B| Version = NM_001060900.1 GI:115461529 GeneID:4337511| Length = 3757 bp| Defi...")
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Gene Name

Os04g0692100

Description

Similar to Tubulin folding cofactor B

Version

NM_001060900.1 GI:115461529 GeneID:4337511

Length

3757 bp

Definition

Oryza sativa Japonica Group Os04g0692100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:35822909..35826665

Sequence Coding Region

35823231..35823278,35823650..35823719,35824357..35824490,35825402..35825443,35825517..35825581
,35826084..35826202,35826277..35826428,35826492..35826602

Expression

GEO Profiles:Os04g0692100

Genome Context

<gbrowseImage1> name=NC_008397:35822909..35826665 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:35822909..35826665 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtcgtcctcgtccaagctgcatctcccggctgacgacagcgtcctcctcctcctcacgcactccaacctctccaccttctcctccgacatccgcgtctccaagcagacctccgtcgaggcgctcaaggacaagctctggaggaagaccggcacatccgttgccttcatgcgcctccagctccgcgacgacaccggcgccatgatcgccgacctcgaccacgatgacgccaccctcgcctcctactccccatacgacgggtaccgtctgcacattatcgatctcgatccttcgtcaatcacctctggtggttggttggaggatacttcccttgttgaaaagtacaccatctcagatgaagcatataataatcttgatacaaactttcgaaaattcaaagaaaagatggcctttaaaaaccctacgtcagatgataaacaacaacaatctgacaagcatatggaggaattgtgcgccaacatcaaggtgggtgatagatgtgaagtcgagccaggtgctaagaggggtactgtaaaatttgttggcagagctgaagctcttggacgtggattttgggttggagtccaatatgatgaaccacttggaaagcatgatggcatggtgaaaggcattcgctttttcgagtgtcctcaagggcatggagctattgttaggccagagaaagtaaaggtcggggactacccagagagggacccttttgaagaggaggagatctag</cdnaseq>

Protein Sequence

<aaseq>MSSSSSKLHLPADDSVLLLLTHSNLSTFSSDIRVSKQTSVEALK DKLWRKTGTSVAFMRLQLRDDTGAMIADLDHDDATLASYSPYDGYRLHIIDLDPSSIT SGGWLEDTSLVEKYTISDEAYNNLDTNFRKFKEKMAFKNPTSDDKQQQSDKHMEELCA NIKVGDRCEVEPGAKRGTVKFVGRAEALGRGFWVGVQYDEPLGKHDGMVKGIRFFECP QGHGAIVRPEKVKVGDYPERDPFEEEEI</aaseq>

Gene Sequence

<dnaseqindica>3388..3435#2947..3016#2176..2309#1223..1264#1085..1149#464..582#238..389#64..174#cacagccggcggcaggcagctcagctcagctccgatcggcggcggcggccatctccggtaataatgtcgtcgtcctcgtccaagctgcatctcccggctgacgacagcgtcctcctcctcctcacgcactccaacctctccaccttctcctccgacatccgcgtctccaagcaggtcaggtctcacctcctcctcctcatgattcaatgaatgacccatgtcatttctaggctgcagacctccgtcgaggcgctcaaggacaagctctggaggaagaccggcacatccgttgccttcatgcgcctccagctccgcgacgacaccggcgccatgatcgccgacctcgaccacgatgacgccaccctcgcctcctactccccatacgacgggttacttaacttacttcctctgctttcctctttctcgctcctctgccaatctcactcccgtctcatctccttaggtaccgtctgcacattatcgatctcgatccttcgtcaatcacctctggtggttggttggaggatacttcccttgttgaaaagtacaccatctcagatgaagcatataataatcttgatagtaagtccccccatatatagtgcttgctgccttcaattcctataccagtgcttttgttatgttgcatcaatggcaatcctatgttgatgctacccttttgccttttactaaggccccgtttagttcacgaaatgaaaatttttgggtgtcacatcggacgtttgaccggatgtcggaaggggttttcggacacgaataaaaaagctaatttcataactcgcatggaaaccgcgagacgaatcttttgagcctaattaatccgtcattagcacatatgggttactgtagcacttatgactaatcatggactaattaggctcaaaagattcatctcgtaatttcccccctaactgtgcaattagtttttgtttttatctatatttaatgcttcatgcatgtgttcaaagattcgatgtgatgtttttgggaaaaactttttggaaactaaacatggcttaattacctccactatttactactaacatcttatgttctgagccagcaaactttcgaaaattcaaagaaaagatggcctttaaaaaccctacgtcagatgataaacaacaagtaagcttcctcaggtttttggctatccgttcctatttttcaccttgcttactctacttcttgtgttctttagcaatctgacaagcatatggaggaattgtgcgccaacatcaaggtcagcaaattttgttcccccatgttcactattaacttgtggcacatactatgggatattgctagctaatctcttatatatatatgttgatttttccgaggctggttttatagcttaattagtaatgcagtgatttatttcccctaccgcattcccaacccctggtccttaggacctgtttgaaatgtgcgcatgagttttttgcggacttggatccaaatccatagaaatttgaactgcatcgtaaaaatttccaagactgccctcaacatcctcccttgtccaaatgcatctgtaaatagaatactggatatgctgtcgtgcaattgaatattacagtttcagacagcatgctaggcatcgcatcagttactgtaatttgtccctctaaacaaacactgatttttaagatgtatatgaatctattgctctagtgaacatggcaagcttgaaggaataagtggacatctttgaggatgaacttgaaactagctgtcttcgtcttttcttcattgctatgaattggagcaaccgacaagactagcagtgtgttttgttctagtatctcccatgtttttgaatagcagttttccataaagaacggtagcatcctcctatcaactgtctgaatgtgtatcattcttatgataaataatttgaattccgaccatgatattggtgatttattgggcatgtttgcatatatcagtcattataaatagaaaatagttgttttatgttgcctttttatttttgaaaaccagttttgtttctatgaaaggggacactactgatttcatgcatcattattcagttccgaattgggttgtaagccttcttttttttatctagtatggaattgtgccgatctttctctgtgctgtctttattatagaagaattatgccacaggtgggtgatagatgtgaagtcgagccaggtgctaagaggggtactgtaaaatttgttggcagagctgaagctcttggacgtggattttgggttggagtccaatatgatgaaccacttggaaagcatgatggcatgtaagtttattgacaaaaaaccacaataaggaacaactcatacttattgctctcatgactgccaattcaggttgcagtgttttgctcttttgcccgctcacacatatttattggtcaatttaatcaactccaaaggggataaaatactagcatctgtcttttgcagtataagtcgaggaacgccaagcagacacagttgtaatatcatcacttttcaccataacattcagtatgaatatttaaccagcaataaaaatgttagtactaccttcgtcccaatataagtgcaacctagtacagatgtgacttatcctagcagctatccagattcgtagtcctagaatatgtcacatccgtactaggttgcacttatattgggacggagggagtagttttaataatattattgacaaaacatcacaatgagaaacaataggccttttgtgttaattatttgatttgtcactataagttgtcatgccgattttatgatacactatattttcctgatgattggcttgctacctgaccatactctctttagctagtaccgaagatattgtgcctggtgcacagtaccaggtctatgggcaaatagctcttggtaacattatgtcttgcttctttgatactgtagggtgaaaggcattcgctttttcgagtgtcctcaagggcatggagctattgttaggccagagaaagtaaaggtatattctcctggctagatgccaaccagtcctctcttttggagtacaattgctcgggagtagttggcaaattggtcttaacattatggtttgcatttgggtttagtgtttcttcaattgactctttggaatgcaaggagtaaccgccgtgtgcttgcattagtggaacatgtaatagtggatatgtggtcatgttgcattgcatattcttagtatctcaagtggcattgtggcttttgaatagccctgttgggtgttagaaaacatcagtgcaaatatccagcgtatttttccatgggtttgtattgtgtttagattgtgcgtttgtacactggtactgttactcagcagttgtctttgggtctttgcaggtcggggactacccagagagggacccttttgaagaggaggagatctaggcggtgcgccatttacgttggacatggtcctctagggatacccatattcagaattgctcccgttaaaatctttcgccctttttttggtctattggtttgagaattaagatcattgaacatgaagaatatatgtgcgtgtgcttgttcctgatcccattctgggatgaccatggtgaaattggggatactgttgtacttttaagtactgagccatctggacgcttgagttggaagtttggttgaaattggaacgatgtgacagaaaagttggaagtttgtgtgtgtagaaaagttttgatgtgatgaaaaaattggaagtttg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0692100, RefSeq:Os04g0692100