Os04g0692300

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Revision as of 11:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0692300| Description = Zinc finger, RING-type domain containing protein| Version = NM_001060902.1 GI:115461533 GeneID:4337513| Length = 245...")
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Gene Name

Os04g0692300

Description

Zinc finger, RING-type domain containing protein

Version

NM_001060902.1 GI:115461533 GeneID:4337513

Length

2456 bp

Definition

Oryza sativa Japonica Group Os04g0692300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:35830195..35832650

Sequence Coding Region

35830493..35830606,35830753..35830827,35831549..35832355

Expression

GEO Profiles:Os04g0692300

Genome Context

<gbrowseImage1> name=NC_008397:35830195..35832650 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:35830195..35832650 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggctcaaggtggaggacgacccgccgtcctcaggctcagttgcagatgcagatgatagcaccgacagactttgccgagtctgtcactgtgtcgagcctgatctcagaggacactccgcccttgctttcttaggcattctaccgccgccttcttctccagatgaagatgcagatgatgttgctaccgccaccgccaccaacaacaatgtcctcgagttcgtaagcccccgcggcgagatttttgtctgcaccgccgccaccaccgacctggaatcaggccctctgcatcaccaccaccatctcatggatctaggatgctcctgcaagaacgaccttgctcttgcgcattacgcctgcgcactcaagtggttcatcacccatggttctactgtatgcgagatttgcggacatgtcgctgtaaatgtaaggcctgcggatttcaataaggtccttgcctccttgaaggaatatgaagctctcagggaaaggacttccactggagacctctcttacttgcattatggggcagattcaggtgtcgatccagacgctgtcgccgcgatacgcagacagcgcctctccgagatatcctcatggttcaaccctcaaaattcacacctcgctatttctcagggccaaaccgaacaaacacctgctagtccaagtaataattctatacaccatggtgctgtggtaacaacagtagtacacacaagatggagtttggagggtactggagtgtttcttgccattggcctaggtgttattgttcttgcatggttagttgctccacatgttggtaagaaagctgctgtgatttgtcttcacatgcttcttggaggtttatgtgcgttgactataataatctccctgagatttgttttcccaaggatccaatatggatctatgcgatgttgggcgatcttgtttgtgttttggttcctggtttttggagtttgggcatcacggacccacagtatacgctcctcatga</cdnaseq>

Protein Sequence

<aaseq>MGLKVEDDPPSSGSVADADDSTDRLCRVCHCVEPDLRGHSALAF LGILPPPSSPDEDADDVATATATNNNVLEFVSPRGEIFVCTAATTDLESGPLHHHHHL MDLGCSCKNDLALAHYACALKWFITHGSTVCEICGHVAVNVRPADFNKVLASLKEYEA LRERTSTGDLSYLHYGADSGVDPDAVAAIRRQRLSEISSWFNPQNSHLAISQGQTEQT PASPSNNSIHHGAVVTTVVHTRWSLEGTGVFLAIGLGVIVLAWLVAPHVGKKAAVICL HMLLGGLCALTIIISLRFVFPRIQYGSMRCWAILFVFWFLVFGVWASRTHSIRSS</aaseq>

Gene Sequence

<dnaseqindica>2045..2158#1824..1898#296..1102#gtcgagtccatccatcgtcttgctcgcaactcgatcgcacaaggagcaagcaaatcgcgattcgatctgactcatcatccaccgaggtgccttgcttccgcttctcggatcgccctcgctcgcagtcgcaccatcaatcctttacttgagacgaggttcgtttgggcttgccctatccctccctcctctctctagacgcttgattcgctcggtgtagattcatcagatagattactaggacaagggcaccgggagatgagatgatcacgcggtcagatggatagataaagatgagatggggctcaaggtggaggacgacccgccgtcctcaggctcagttgcagatgcagatgatagcaccgacagactttgccgagtctgtcactgtgtcgagcctgatctcagaggacactccgcccttgctttcttaggcattctaccgccgccttcttctccagatgaagatgcagatgatgttgctaccgccaccgccaccaacaacaatgtcctcgagttcgtaagcccccgcggcgagatttttgtctgcaccgccgccaccaccgacctggaatcaggccctctgcatcaccaccaccatctcatggatctaggatgctcctgcaagaacgaccttgctcttgcgcattacgcctgcgcactcaagtggttcatcacccatggttctactgtatgcgagatttgcggacatgtcgctgtaaatgtaaggcctgcggatttcaataaggtccttgcctccttgaaggaatatgaagctctcagggaaaggacttccactggagacctctcttacttgcattatggggcagattcaggtgtcgatccagacgctgtcgccgcgatacgcagacagcgcctctccgagatatcctcatggttcaaccctcaaaattcacacctcgctatttctcagggccaaaccgaacaaacacctgctagtccaagtaataattctatacaccatggtgctgtggtaacaacagtagtacacacaagatggagtttggagggtactggagtgtttcttgccattggcctaggtgttattgttcttgcatggttagttgctccacatgttggtaaggtaagtttgatctccaaactgctttgttcttacctgtgacctctgtcatttggaaactacaacttgattccacactttttgacactttatgttaggatcattcgaatctcttgaaatttattatcttgcaagcacagacccccttaagtctatgttcagcacagttacacatttagttgcagagtcagttttaagaagtcataatgcaaaaaagaatactttgatgcataaagctccatcttataattcatatcttaatgtccatttatcttccgaaagtggtgtgcggcttaaatatctattgcctgttactgctttgtcctaactaatacacaccgtgtatctgatgatatgtctcacgtccttctcttatgaaagtttggtaccggctagcacaatgcaacagatcatgtttgtggtctttatccaaacattgtatggcaaatgctcttgatcgatttttagagatataaggtagacaggcttaagtagaaaaatagatgcagctgtgccttataataccatcaggttgcgttctcatcgtgttcaattatccatggaatattatgtgtcacatgcaaatttctttcatttctcagtctttctctatgcattattgtcaactaattaacaccctctcatctcacacaatttgcaattaagaatcttccatggatcaaacatcactgagaagaatggttttgttttaatttctttgcagaaagctgctgtgatttgtcttcacatgcttcttggaggtttatgtgcgttgactataataatctccctgagatttgtaagtaaatgattgttttctaatgatatgtttcactgcattgccacatgttgactttgactgattgcatatattgagaggattcctgcttttggcatggtttctgtgatggccatagagtgatccattatcttctatgtttgcaggttttcccaaggatccaatatggatctatgcgatgttgggcgatcttgtttgtgttttggttcctggtttttggagtttgggcatcacggacccacagtatacgctcctcatgaggatggagatcatggtgagaaagtaggtttcggtcttatactatccacatccgctgtgcagtgatagatatggcatctttgtgtatacccatctctatatatattgcttctgaatttttcgaattaaatatgtcagatgtatatgcatgaccacaagaaaaaggaaaagtttgttattggtgttacagtagactgctagtattaatttgatatacatctagactaccatatagccttaaaactgataaattatgcttcaagaaaaagttaaacagataaaatgggaatacaaggtctg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0692300, RefSeq:Os04g0692300