Os04g0692400

From RiceWiki
Revision as of 11:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0692400| Description = Protein of unknown function DUF248, methyltransferase putative family protein| Version = NM_001060903.1 GI:115461535 ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0692400

Description

Protein of unknown function DUF248, methyltransferase putative family protein

Version

NM_001060903.1 GI:115461535 GeneID:4337514

Length

3876 bp

Definition

Oryza sativa Japonica Group Os04g0692400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:35835056..35838931

Sequence Coding Region

35835266..35835901,35835985..35836134,35836476..35836746,35836883..35836993,35837207..35837381
,35837479..35837751,35837982..35838176,35838477..35838699

Expression

GEO Profiles:Os04g0692400

Genome Context

<gbrowseImage1> name=NC_008397:35835056..35838931 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:35835056..35838931 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtttggcagccacacgcgcctggatgtgaggcgggcgcagcagcactcctcattctgctccccctcctccgccgccgccgtcttggtggcgctggccttggtcgccgtctggatggcctcttccacgctcgtcacccccgcggatttctcccccttccgccccacaaccacaaccacaaccacaaccgctcgacctcggaatcggatggatcctgtgactgttgaagaggacgccgacgaccctcctccactcacactcagacagactgagaccggacccggaggggataatggctcccactcccactccccctccctggagaccgctacagaggcagaccctcaagctgcacagtccaacagcaacaccaaggacactccccacaataagcagcagcagcagcagactgcgtcgcccacccccagcagctatgcttggaagctctgcaatactgaggctggtccagattacatcccatgcctcgacaatctccaagccatccgcaaccttcggacgaccaagcactatgaacaccgagaaaggcattgcccccaacaccctcctacctgccttgtccctcttccaaagggctacacaaatccaattaggtggcctaacagcagagatcagatatggtacaacaatgtcccgcatactaagctggtagaatacaagggtcatcagaactgggttaaggtctccggggagtacctcacctttccgggaggaggaactcagttcaaacatggcgcattgcactacattgatttcattcaggaggcaaagaaggatatagcatgggggaaacaaactcgtgtggttttagatgttggttgcggagttgccagctttggaggatatttatttgatagagatgttcttactatgtcgtttgcacctaaagatgagcatgaagcccaggtgcagtttgctcttgagagaggaatccctgctatgtcagcagttatgggtacaaaaaggcttccattccccggcagggtcttcgacgttgttcattgtgcacgctgtagggtaccatggcatattgaaggtggtaagctcttgctagaactggatagactgttgcgtcctggtggctactttgtgtggtctgccactcctgtgtaccagaagctgccagaagatgttgaaatatgggaagcaatgtctactctaacaaggtcgatgtgttgggaaatggtcaataaagtgaaggatagggtaaatagagtgggtatagcaattttcagaaagccaacggataatagctgttatgaggcaagatcagcagcaaaccctccaatctgtggagagtatgatgatcctgatgctgcctggaacatatcattgcagtcatgcgtgcataggttgcccactgatcctgccatccgtggttcacagtggccggtggaatggccattgaggttggagaaaccaccttactggctgaaaaactctgaggctggtgtctatgggaagcctgccactgaggattttcaagcagactatgagcactggaagcaggtcataagcaattcatatatgaatgacttgggcattgattggtcagctgttagaaatgttatggacatgaaagccgcatatggagggtttgcggcagctttgcgagatctgaagctgtgggttatgaatgttattccaattgattcacctgacacacttccaattatatatgagcgtgggttgtttggaatctaccatgattggtgtgagtcatttagcacctaccccagaacctatgatcttctgcacgcgaaccatcttttctccaagattaaaaagagtgacaggtgtaaactagtggcagtgatggtggaggtggatcgaatactgaggaaaggaggcaggctaattgttagagatagtatggagacaatgcatgaagtggagtctatggcaaaatcgctacactgggaggtccgcaagtcttactcccaggacaatgaaggtttgctgtttgttgagaagacgatgtggcgaccaaatgaagttgaagctaagctatga</cdnaseq>

Protein Sequence

<aaseq>MAFGSHTRLDVRRAQQHSSFCSPSSAAAVLVALALVAVWMASST LVTPADFSPFRPTTTTTTTTARPRNRMDPVTVEEDADDPPPLTLRQTETGPGGDNGSH SHSPSLETATEADPQAAQSNSNTKDTPHNKQQQQQTASPTPSSYAWKLCNTEAGPDYI PCLDNLQAIRNLRTTKHYEHRERHCPQHPPTCLVPLPKGYTNPIRWPNSRDQIWYNNV PHTKLVEYKGHQNWVKVSGEYLTFPGGGTQFKHGALHYIDFIQEAKKDIAWGKQTRVV LDVGCGVASFGGYLFDRDVLTMSFAPKDEHEAQVQFALERGIPAMSAVMGTKRLPFPG RVFDVVHCARCRVPWHIEGGKLLLELDRLLRPGGYFVWSATPVYQKLPEDVEIWEAMS TLTRSMCWEMVNKVKDRVNRVGIAIFRKPTDNSCYEARSAANPPICGEYDDPDAAWNI SLQSCVHRLPTDPAIRGSQWPVEWPLRLEKPPYWLKNSEAGVYGKPATEDFQADYEHW KQVISNSYMNDLGIDWSAVRNVMDMKAAYGGFAAALRDLKLWVMNVIPIDSPDTLPII YERGLFGIYHDWCESFSTYPRTYDLLHANHLFSKIKKSDRCKLVAVMVEVDRILRKGG RLIVRDSMETMHEVESMAKSLHWEVRKSYSQDNEGLLFVEKTMWRPNEVEAKL</aaseq>

Gene Sequence

<dnaseqindica>211..846#930..1079#1421..1691#1828..1938#2152..2326#2424..2696#2927..3121#3422..3644#gatttcactccgcttcttcttcttcttcctcctccttgattgagttgtttgctcgatcgatggattgattgtcactgtctgtttagcaatcaagctagctacgaacaggaatgtagtactaatctgcatcgatcagtgcctctaatcttcttcttcttctcttgtaaccagcagcagaagcaagcaatccccctctcctctctgagagagatggcgtttggcagccacacgcgcctggatgtgaggcgggcgcagcagcactcctcattctgctccccctcctccgccgccgccgtcttggtggcgctggccttggtcgccgtctggatggcctcttccacgctcgtcacccccgcggatttctcccccttccgccccacaaccacaaccacaaccacaaccgctcgacctcggaatcggatggatcctgtgactgttgaagaggacgccgacgaccctcctccactcacactcagacagactgagaccggacccggaggggataatggctcccactcccactccccctccctggagaccgctacagaggcagaccctcaagctgcacagtccaacagcaacaccaaggacactccccacaataagcagcagcagcagcagactgcgtcgcccacccccagcagctatgcttggaagctctgcaatactgaggctggtccagattacatcccatgcctcgacaatctccaagccatccgcaaccttcggacgaccaagcactatgaacaccgagaaaggcattgcccccaacaccctcctacctgccttgtccctcttccaaagggctacacaaatccaattaggtggcctaacagcagagatcaggtctaactttgctatcttgccttatcattaccactactcctagccctagaatgattcatttactttgtgtttgcttgatgcagatatggtacaacaatgtcccgcatactaagctggtagaatacaagggtcatcagaactgggttaaggtctccggggagtacctcacctttccgggaggaggaactcagttcaaacatggcgcattgcactacattgatttcattcaggaggtaatgttcctcagttttttgtgtgtgtcaacaggcgttattgttgtgcaatacaaccattcgttacaacatttctaacaagttgacaaattataaccgtaaaccttttacattgttagaacgaatattacaaattgctaatgattgttgagtaggtgcctcaaccaaattcctttggaatcaaactacatatcagcaacgttgcttctagttaagcagaatgtagctcttttcttctttcctgcaaaaataataatccaatagatttcgttattcaaatgtggtggttacataagtacgatcgagcttgttcaactaacatgtctgattcttctatgcaggcaaagaaggatatagcatgggggaaacaaactcgtgtggttttagatgttggttgcggagttgccagctttggaggatatttatttgatagagatgttcttactatgtcgtttgcacctaaagatgagcatgaagcccaggtgcagtttgctcttgagagaggaatccctgctatgtcagcagttatgggtacaaaaaggcttccattccccggcagggtcttcgacgttgttcattgtgcacgctgtagggtaccatggcatattgaaggtgctttctgtcacaaggaacctcttcctgtacaatatcatacctaccttttgtgttacccttgtttgacgtatattaatatcaaacctaccttttgtgttacccttgtttgacgtatatttgtgttttttcttaggtggtaagctcttgctagaactggatagactgttgcgtcctggtggctactttgtgtggtctgccactcctgtgtaccagaagctgccagaagatgttgaaatatgggaaggtaaatttattggagctctcttacattcagaatttcgcgttcttggatatgctattggtggtatcttgagcctggacagttcctagactccatgccaactgaattattgtaatgaaatagcgtattgtattattattatttttttaaaaaaagagataaagaaatagtgtgtgctattcactacctaatagttatgcttgtgcattgttccagcaatgtctactctaacaaggtcgatgtgttgggaaatggtcaataaagtgaaggatagggtaaatagagtgggtatagcaattttcagaaagccaacggataatagctgttatgaggcaagatcagcagcaaaccctccaatctgtggagagtatgatgatcctgatgctgcctggtaagtgttttagctggttatatcttcattcttgggtactggttaccaaatcttgtacctaacttttaggttcattcattcccttgttgtcattcaggaacatatcattgcagtcatgcgtgcataggttgcccactgatcctgccatccgtggttcacagtggccggtggaatggccattgaggttggagaaaccaccttactggctgaaaaactctgaggctggtgtctatgggaagcctgccactgaggattttcaagcagactatgagcactggaagcaggtcataagcaattcatatatgaatgacttgggcattgattggtcagctgttagaaatgttatggacatgaaagccgcatatggagggtatgccatagcactcgcatcacttcttcgttgccttcttttttttcaatgcctatctagtgttttttttaataaaaaaagatttacatgcccatctagatctagttctttccatgcattttttaatttttctttaattgaaatctatgttggtagattattctgaagcaaaaggatgcatctattgtgttatatcccatttgatttcttgaatccacttcctcttgtaggtttgcggcagctttgcgagatctgaagctgtgggttatgaatgttattccaattgattcacctgacacacttccaattatatatgagcgtgggttgtttggaatctaccatgattggtgtgagtcatttagcacctaccccagaacctatgatcttctgcacgcgaaccatcttttctccaagattaaaaagaggtacaatctcgatctctccgtaaatgtgaacacaaaaccaaagatatatgtaagatatatgtgaaggttgtcactttgtttattgattggtgctgccaatgaacaaaactaattttcctgctgagcatgcgtcctttgtgtgtgtaaattttgccattgcatcgcctatggttttagtatcattttggtagcactggcactggtgcacaatatagcaatgtgaccaagagtttgtatggctgtgctgagagaagaataatgtggtacatgtaatgtaactgagatgttgttggatgacagtgacaggtgtaaactagtggcagtgatggtggaggtggatcgaatactgaggaaaggaggcaggctaattgttagagatagtatggagacaatgcatgaagtggagtctatggcaaaatcgctacactgggaggtccgcaagtcttactcccaggacaatgaaggtttgctgtttgttgagaagacgatgtggcgaccaaatgaagttgaagctaagctatgacgtaccataccagcaccaccgttatgatagctctgacactgaaacccttggaagaggaaaacaaaagtagccaagtgggggatgcacagtaagctatatatatagtgggtttttgtaggggtatacttggattttgggagaagctgtaatgtgttttttttttttttgcgtgggatgatacattagcaactaatgcatggtgatgatccatgttgaggctggcaagtttaac</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0692400, RefSeq:Os04g0692400