Os04g0692700

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Revision as of 11:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0692700| Description = SNF2-related domain containing protein| Version = NM_001060906.2 GI:297603639 GeneID:4337517| Length = 5644 bp| Def...")
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Gene Name

Os04g0692700

Description

SNF2-related domain containing protein

Version

NM_001060906.2 GI:297603639 GeneID:4337517

Length

5644 bp

Definition

Oryza sativa Japonica Group Os04g0692700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:35845420..35851063

Sequence Coding Region

35850478..35850612,35850722..35850970

Expression

GEO Profiles:Os04g0692700

Genome Context

<gbrowseImage1> name=NC_008397:35845420..35851063 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:35845420..35851063 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccccgacttcccaacctcaacctcaacaggaggtggaggtggaggtagatgaggatgaggagctagtcaacatggtggtggaagccggcgtcggcgccatcaagatgaagatgaagatcccccgccgcgtattggggtcgctctacccgcaccagcgcgacggcctcgcctggctctgggcgctgcactgcaccgccaccggagggatcctcgccgatgacatgggactcggcaagaccatccaggtttctgctttgctggccggcttattccattccaatttgatcaagagagccttaattgtcgcccctaagactgacttgactcactgggtaaatcacctctcactcctcggccttcaacaccacatcagactgtaa</cdnaseq>

Protein Sequence

<aaseq>MAPTSQPQPQQEVEVEVDEDEELVNMVVEAGVGAIKMKMKIPRR VLGSLYPHQRDGLAWLWALHCTATGGILADDMGLGKTIQVSALLAGLFHSNLIKRALI VAPKTDLTHWVNHLSLLGLQHHIRL</aaseq>

Gene Sequence

<dnaseqindica>452..586#94..342#agtagtacccttgttgtctttaaagttccttccactttcaccaccggccgcggagccctcgccgccgccgccgccaacggccgattcgttccaatggccccgacttcccaacctcaacctcaacaggaggtggaggtggaggtagatgaggatgaggagctagtcaacatggtggtggaagccggcgtcggcgccatcaagatgaagatgaagatcccccgccgcgtattggggtcgctctacccgcaccagcgcgacggcctcgcctggctctgggcgctgcactgcaccgccaccggagggatcctcgccgatgacatgggactcggcaagaccatccaggtactcttctcttcttttctcctctcctccacctcctcccatccctaatccactggagtacatcaatcaatgtatggtctcacaagggcaaggccgggtccaaatccaggtttctgctttgctggccggcttattccattccaatttgatcaagagagccttaattgtcgcccctaagactgacttgactcactgggtaaatcacctctcactcctcggccttcaacaccacatcagactgtaagaagccacatctttacttacatccacacatcaatcactgctttacttcttctctaattaatctgcattccgccagctactctggccctagcctaaacgatcgctgctatcaacttaactgcaccttcaaggtctcatcttaactttacacttcatcctcaattcatctttccatcaacccattccatacttgtacactacttgcaagttgaatctttcaccaggagggtggcattctactaacatcctaccacatcgtccggaataattacatgttactaagaggcaatggcaacggtaacaatgttgacaacaacgaagaagaaccactgtgggactatgttattcttgacgagggccacattgtcaagaatacaaagacgcaaagggcacagagcttgtttcaaataccttctgctcatcgcattgtactcactggaacacctattcaaaataaattaaaggtaccctcatctcaaatgacttttcctctaacctttctatttatcttcttttacttccactgagcatcactattctggcaggaaatgtgggctttgttttatttctgttgcccagatgtcctgggtgatgaggatgcgtaaatcacttaactcccccttgtttcttatacaatacttatgcaaaatcaatctatacttatgaatatttattttgtaaagtcaagtgttgtgagattctcttggttactgcaggttcgaacttaggtacgagaagccaattctttgtggaaatgacaagaatgctactgatcaagagaagcaaatggcttcaaatgcagcaaaagtatgttctctttcgacataataagtttgtgcctgatgtactaatcttgttgcatcatttgttttggtctgttctgaacgctattaatcacaggaattaagagagcggattaaaccacactttctccgtcgtatgaaaagtgaaatatttgtagatactggcgcgaaagatgacaaaaggccacctcagaagaatgaattggttatctggttaaaattgacatcttgccaggcaagtgccttgctgttctgctgcaaacctctattccatttatagaactccttgggcatttgactctggtattccaccagtatacgattgctctaggttttgtataatgaaggtgttgggagtataaaagggttatgtgtctatgctttatagattattgatgattttgtttcgggtgcagaggcgattgtatgaagccttcctgaataaagatccagttcgttcacaaactggagcattgaagggttcatccttggaagctagcacggtatttatgtactgactgtttttactttcatcattttacctaccgtctgcttccgttgacattaagatgtcactccttggagtgaattgaaatttctagtatgccatgttccatttactgttggtagatttttgaagaaaatatgtaatggtgcatcgtgcatgcatgtgtgtgctcacttgttttaattcaacacaaacagattttgaggaaaatatgcgatcaccctctacttttgactaaaagagatactgatgatttcctggaagaaatgggtgccatgctgaataaccgagatatgtgcatggtggaaaggattcttgaagataacctttatgctgacaaaagactacagattgtccaaggcgcctcctgcaagatagcttttatccttcccttactggtcagtgcttcttttatgaaatgtccattttatagtccctccagtccatggacaaaatgtgcttagtatatggagcaattaaacttattaaattcttctccctgcaatatttacttatatctagactggctaaaagaaaaattatatagatgtgtactttatttggatatatcataacgtaacacttgtatagattattcctgtattttggtaaaagttagcaagtcaaaaggctacgttggatgttctgcagaagaaaaatacaatatgtttctgatataaagggattaatgtgccacttcctatgaaaaatcatgctacatttttttatgttgcagaggaaccttgttgaagagggccactatgttttgatattttcacagacacgtgtaatgcttaaccttattcaggtatagcctattcttatattaacctttatttgctttatcatgcatgtgatgtgcttgtgatattgctaacactttatttgattcaatttgtaaaagtttcccatttgaaaactatgctttgttactggaagaatcatatcggtagttaattgctgtcagtaatcatgccatacgtgtgtccatgattacctgtgtcttgtatcatatatgctttcagtatagaattaaaatgcctttagttgtttactaatctatataaagtttaatagcaagcattgcattgttgaaatgtctgtttaatcttcggatagttgtcataatcattccaacaaagcaggatgctgtatctatcgagggccataagttcctgcgtattgatggtaccaccaagatatctgagaggaagaagattctgaaggtacctccttatttttttcacatttttctgtctgttatgttaagccatggattccataacattgcattgcaccctctaggactttcaagaggggcttgacagtccaatattgttgttgacctcacatgttggtggacttggcaatacactcaccaaggcagatcgggttatagtagttgatcctgcttggaatccaaggtacccagcaattctaaattgtgaatgctttacatcaactttcttcaattaatcatatatgttttttactttatagcatagataaccaaagtgtcgaccgtgcttatcgaattgggcagactaaagatgtgattgtatatcgtttggtaacttgtgggaccattgaggagaagatttacaagcaacaggtatttaaactgttaaatgtaaatcatacttatataagggcttatatgaaacagaaacaactagaacagtctgagctcaatcatcttcatcttccatctcttggaaaacctgacctttttcttttgtatgttgatcggtacaagaatgcagcaagttattgtatggataacaaatgttaatttacaggtgcaatttccatgttaatttacaggtgcaatttccctttttttgctgtttcagatcttcaagggaggtctttttaggacagctacagaatgcaaagaacaaccgcaattttataaccaggatgtatgccataccttttcttgtcaatcacaactgcaattcagactgtgacgtactctacactatatcacaatatcgtattggaagttatggttcattggttctttcctttccatacagctttaccttcagaatgaacaagagtactctagtttgccgccacatgggtttgacgcctctctcacccaacacaaaatgcaagtggagaatggtcagcagcttgtcatgtaagaagtctgctccggttctttgttatattcaataccatcgaaattgtactcagtcttttattactggtagtttctcatccgtactaaattacagtttctttatggtcctcaagagctggaggtatttcttagtattattttttttcacacctgccaatttgtaatttttttgggatacacgtgaacatagtttccatcatttgataggttgaatgccaaaaggttcaagtttcagaagaaacatattcatactctggtatcgatcagtcaaaaactgcacaccaaagtggcaaagtgtatagatttttcaatggatttattctggggataccgatgtcagaaccctcgttttgttgccctggccttcctccaaaccgaagtgctagtttaaaaataaatttaagtaacttttgataattgtctgtttgtgtatgggtacaacttttttatattccatgctttgcacatatatctcagggatgagtccttgaagaagcacatccagttcttggaacaacaaggtatagctggcgtgaaccgtcatggcgtcctgttctgtaaaactgagaccactgcaactttgggtgacgacggtgcaataaacaggtctgtcatttcttactcatttttcagtgatcccacttatagttttgtttttcagagatcctgttatagcttgctgtgtgtagaatcgattgtatagtttcttcttcctgcattgttttatgccctacaattttttttcgttttgctttcacgaggtacgactgtccctggacttccttctgggttctggcatgtttttgaacatgttatttatgcgcaggaaggtgagagacattatggtgaggcgctgctatgctccttgggagcacatttgtagagatgtcgagaaaaagagcttgatcgatcaagtgaaggagatgagcaagaagatggatggtttgggagatacaatgggacggattgttgctttggaggaggagtatgcagccgagctcattggaatgctccatgaaaacaggtgggagagaagccatctggagaagataaggatgcagatcgacgatctgcatgaggaacacatggcaaagtttgatgaaatgctggaaaggatcaagaggatggagctggctgatgagggtgagttgatagccaagtttggtgaaatggtggagaggatgaggcagagatgcgacatggatagattgagcctgccgcttctgtcttctacccttgtagcgtagcgtaacaaaggtagttacgagtacctttgtatgtatgaatcccttccagttattcaatcagaggagctagtagtatgtagagcgtatggcacttgagctagtagtatgaatgaatcccttttagttactaccttggaatcgatcaaaggtagttactacctcagtatgtatgaatcccctttagttattcaatcagaggaggtagtagtatgtagtatgtagagcacatggcacttggagctatatgttgtccccagttctgaatgaagaacgtagaggaactatttatacatgatgtggcatatgttatccaaacatgatttgagtgagcaagcagaagcagagttaattt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0692700, RefSeq:Os04g0692700