Os04g0692750

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Revision as of 11:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0692750| Description = DEAD/DEAH box helicase, N-terminal domain containing protein| Version = NM_001187232.1 GI:297723594 GeneID:9266414| ...")
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Gene Name

Os04g0692750

Description

DEAD/DEAH box helicase, N-terminal domain containing protein

Version

NM_001187232.1 GI:297723594 GeneID:9266414

Length

6681 bp

Definition

Oryza sativa Japonica Group Os04g0692750, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:35851899..35858579

Sequence Coding Region

35856404..35856562,35857370..35857603,35857807..35857861,35857953..35858083,35858544..35858579

Expression

GEO Profiles:Os04g0692750

Genome Context

<gbrowseImage1> name=NC_008397:35851899..35858579 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:35851899..35858579 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cttggagatgacatgggccttggcaagaccatgcaggtttctgcattcctggctggattgttccattcccgtttaatcaagagagtgttagttgtagctccaaagacgcttctgactcattggaccaaggaactttcagttgtgagcctcaaagataagatcagagactactctggtcccaatgcaaatgctcgcaactatgagcttaaatatgccttcaaggagggtggaatccttttaacaacatatgacattgttcgaaacaatttcaagatgataaaaggcaacttcaccaatgattttgatgacgaggaagaaacattatggaactatgttattcttgatgaggggcatattatcaagaatccaaagactcagagggctcaaagtctatttgaaataccctgtgcacatcgtattgtcatcagtggaacacccatacaaaataacttgaaggaattaagagaacggataaagccatactttttgcgacgcatgaagaatgaagtgtttcttgatagcggcacgggagaagataaaaagcttgctaagaagaatgagctaattatctggctgaaattaacatcttgccaggtacagatcattttccactga</cdnaseq>

Protein Sequence

<aaseq>LGDDMGLGKTMQVSAFLAGLFHSRLIKRVLVVAPKTLLTHWTKE LSVVSLKDKIRDYSGPNANARNYELKYAFKEGGILLTTYDIVRNNFKMIKGNFTNDFD DEEETLWNYVILDEGHIIKNPKTQRAQSLFEIPCAHRIVISGTPIQNNLKELRERIKP YFLRRMKNEVFLDSGTGEDKKLAKKNELIIWLKLTSCQVQIIFH</aaseq>

Gene Sequence

<dnaseqindica>2018..2176#977..1210#719..773#497..627#1..36#cttggagatgacatgggccttggcaagaccatgcaggtgggactgggaccctctcatccttctaatttcgtctacttttaatgcttacagaatacttgtggtgccactgatactagttagtgatcaccttccatgtattaggattaaggattactgctcttccttttccaaattaatgatacgatcaggggaggcctctgcgtagtttgtgtgttttttatggtaggatcagggcaggacttttaatcatctgaatcttttgtgctgtccacatcatgcatttatgatgaaatcgaaagcagtctccgtccgatagaagaacagaactgttttgtcactaccagttgtctaactactgtcagttttattattaccttcattgcacgaattacatggtagtgtccatggagtattatgcatatgaagagccgagttctgtctcgctctaaatgtgcaatcgactgatgtgtattctcatcctttttttatcatgcaggtttctgcattcctggctggattgttccattcccgtttaatcaagagagtgttagttgtagctccaaagacgcttctgactcattggaccaaggaactttcagttgtgagcctcaaagataagatcagagagtaggatattttgtgttgacatatatcttccctcaaattgatagaggtcatgttatctcgtgctaattgttccctttttcttttctgacagctactctggtcccaatgcaaatgctcgcaactatgagcttaaatatgccttcaaggtctggtctcctaacataagtgtctttgactagccacattcttgacctggcttgttgcaagtttgggttttgtaatacttggaagtcctaaaagttaaaatttgagttgtatttgttcgtagcatcatttagaagaatattcggttcttccatgatatcacaataaataccagctgttttagcatattattgtctttctacaggagggtggaatccttttaacaacatatgacattgttcgaaacaatttcaagatgataaaaggcaacttcaccaatgattttgatgacgaggaagaaacattatggaactatgttattcttgatgaggggcatattatcaagaatccaaagactcagagggctcaaagtctatttgaaataccctgtgcacatcgtattgtcatcagtggaacacccatacaaaataacttgaaggtatcctactctcttaatttttaatgccttataattggcgcacgaaccaatgcaagtaatcctgattattcttgcaggaaatgtgggctctgttttatttctgttgcccagaagtcttgggtgataaggagcagtaatacacttatgcccgttgtttttctgcattgccattgttgcttcatattacacaatctagtgttgtttatttctcttgtttttggcaggttcaaagcaaggtatgagcacgctatcattcaaggaaatgacaagaatgctaccaatcgacaaaagcacataggctcaaatgtagcaaaggtactaatcctttttcatgttgtgatagatgatcctgtttcatgttacttttgtgtctgaactggatatttaattattaggagagccagattttccaccacattagcattttgactattaatgattatggtgtttactctattccaatttttgcggaattattattttttgttattattatttcattgagaagacagcaatttggacacagacatacttcttattataggtactgcaatcatgtatcatcaaagtagtacagtcgtgtactccaatttgacttgtaaagcaatggaattatgtttccataccaactaataaaaatgggcttttagttggttccatgagagggaaagctatttacattgagcctcctcctttgttgcatttctttaactgccacccattcttccagattatttcttcaggtctgctgttctactttttatataatatgtggtttttggttttgtacatgatcatttattacaggaattaagagaacggataaagccatactttttgcgacgcatgaagaatgaagtgtttcttgatagcggcacgggagaagataaaaagcttgctaagaagaatgagctaattatctggctgaaattaacatcttgccaggtacagatcattttccactgatgcaaaactctggttttgttattggttaactgccatcttaatattagtccttttttattttttggatgcagaggcaattatatgaagcttttcttaacagtgaactagttcattcatcaatgcaagggtcacccttggccgcaatcacggtaagcatcaccttcaaagtttttatctgtgctgattttgtttgcttttatatgttgtcagcattgtttagacctttatgttctttccatttccttatcatatgtcatatttcatgcgagagtgcattgctttctcttgttgttcttgtgatgcacattgtcatgttgtttgatatcctcaatttatcagaaaaaggatttatgtacactcattggtgcacttatgtttgtttctgtttcttgtattcttaaacagatattgaagaaaatatgtgatcatccgctgttgttgactaagaaagctgctgagggtgttttggaaggcatggatgcgatgttaaataatcaagaaatgggaatggttgagaaaatggccatgaaccttgcagatatggctcatgatgatgatgacgttgaattgcaagttggtcaggatgtctcgtgcaagttatcttttatgatgtccttgctcgtaagtgttctttgatgatccacattttagttgtcacctatgtatttgtttatctaacaaatggtaaatcttaatgttgcagcaaaatcttgttagcgagggacacaacgtcttaatcttctcgcaaactcgtaaaatgctaaacattattcaggtgataaagtctattcttgttatgttaatctttgtttgctttatagtcatacagttctgtgattttcttgtgattttggtatattgttatttgttatcctagcaaagtaattgttctgagcccttgataaggcctgatttcttcctgtcaatgtatagtcatccaatcacatatactattgacagtcccctcagtgcctcggtagaaagtagaatcaacttttttggtttatcctcatgcagtactagtagtgatatattttttgaattgagtgattacatatagtttcatgaaaatatgatttctatgggactttttttttgttaacttctgttaagatttttacatcttgaaattcagaatctagcaatcttattttcaattatcatcaatgtgtgtttttttttaaattgaatatttttttgtttgctctacacttctccctaaaactattccagaacatatttgctcgttgaatgatagaaaaaacattgtatcagactggagttcttttcctttagtggttgccgtacactcatttgtgagaagttgaaaacaaattacctaacagaatgaacttgacctcgagcaggcttttaattagtacacccctgaatccctgatgtagcctatctgaccatagtgtgtttttcaatgttcatttcctactcctttgaccatttttatcattcttgtaatgtttacgattactatcatcatgcccgtgcgtggaaaggatcctaactaaatataatgtaaatctaataattaacattgattgtactcaaatttagaacttataaacacgattatatgagaccaattaccacctacatatactcatgcaaatatataatatttttatgtaaaaatcttacaaataatgcacacgtgcctatatatttacagccacaaaagttctggtgtagagatgggtgtaaaacctaccgttacctgccctcccccccaaattcctgcttttaaaaagtagtaaggagtagtaagatatgcattctgggttactacttcaacctagtagctaatgtagcttattactgcaacaggaggctataatattagaaggctataagtttttgcgcattgatggtaccaccaagatttctgagagggaaaggattgtgaaggttcttctctgtctttccctttccttcttttatgccatgggcaaaattgttactgctatattgcttacatggaatgcatttgtgatcaggacttccaagagggtcctggagctccaatatttttgctgaccacacaagttggtgggcttggacttacactcaccaaggcagctcgtgtcatagtagttgatcctgcttggaatccaaggtacctgaacaacgccgtttccttactgagtttattgcctttttattttactgaatgtttgtctctgtatgtttactaatgctcctgtttcccatcttcagtacggacaatcaaagtgttgatcgtgcttatcgaattgggcagatgaaagatgtcatcgtataccgccttatgacatctggaaccatcgaagaaaagatatacaaattgcaggtttaaatatggtcaagaatttacttgctgtttatgccttttatcgcgcttgttattcactgaagcaactgattcaaaatatgatatctcaaaaaaaaaatattgaaaagatgagtccatggtcatatttagttgtatgcctccttgagattctctatgtagcaccaaactattaacttgtactttctagggggtgaaataaagtacggtttttcattgaagttaacttctcttcctaatttgaaatttgagagtttaatgtggggctgggttcatgtaagaaaagaaaaggtgggactggtgacactttttactgggttgtgccattacatgtttttcctgcaatgtctccgtcagtgttatacccctattcctttatttgcatattgcatatttacttcagtaaaataaaagctagattctaactaatgagataatacatgccccttttccaggtcttcaagggggctctgtttaggacagctacagagcacaaagaacaaactcgttatttcagcaagagggtacttagtgtgatacggttcttgttattgttttctctgtcatattggataatttataatatggctattttgtgtgtacattcaggatattcaagagcttttcagtctgcctgagcaaggttttgatgtttcgctgacacaaaagcaattgcaagaagagcatggacaacaacttgtgatgtaggacatctacttttagtcggttaattctagcaccactattatgttttccatgaggtgactgctgcttatgctactacattttcacaaaaaaacaaggggaaatggttgtgatatcagcagaaaatgtgcggcaaaatgtttaggttgctctgcaatatttcatggttactgccatatgtagaaagcatatgatgatgaactgctgcataaaaaagtagtactccctccgtttcacaatataagtcattctagcatttcccacattcatataggaaatgctagaatgacttgcattgtgaaacggaggaagtagtatttctcaaatgcatttgctggagtaagagctgctcaatccctgagcaatacttgctggcttgttggtaatgatttccatgttcactgatgataagtttgttgatctgcggcatgtaccagggacgactccttgaggaagcatatacaattcctggagcaacaaggcatagcgggcgtgagccatcacagccttctgttttctaagacagcaatcttacctacactgaatgataatgatggtttggacaggttaattttactgtcttcaaagtgcagcatatgtttgttttgctttcagagaaatattgatctggcacgttgcaacacgtatccatttgttgctgttacctttggtgtctaacaggtgatgtatgctgtttctgtgtgcagcagtcgtcgagctatgccaatggccaagcactactacaagggagcctcatctgactatgttgccaatgggtaagaggagttcatgggacttaatcaatggcttttgggctgcataattaagttgtgtaccgtgctgcttgttttgtgtagtgctgcctatgcgatgaagccaaaagagttcattgctcgaacatactccccgaacagcacaagcacagaaagtcctgaggaaatcaaggccaaaatcaaccggctttcgcaaacccttgcaaacacggtgggagcaagaaagacacccgaacctgttgcatgcatcttgtggtgtgttgtctgtctgtcttacaccatttgccgctgttgtaggtgcttgtggcgaagctaccagatcgtggagacaagataaggaggcagataaatgagctggacgaaaagctgaccgtgatcgagtcttctccggagccattggagaggaagggtccaacggaagtaatctgcttggatgatctgtctgtctagtgtagggcatgtctgtttcttttgcttaaattccatgcttgcatgctagtagtcactaaggcgtgacattttgcatgctacttgtactaattgtgacgaccacggaacggaacacatgctgatctcgggtgcctcttaggcttgtgtctgagaggagaaaaagagaatattgaccaaaaggatgttagttattactccctccgtccttaaatataaaggattttggtgagatgtga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0692750, RefSeq:Os04g0692750