Os03g0101100

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Revision as of 12:14, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0101100| Description = Similar to Palmitoyl-protein thioesterase-like| Version = NM_001055185.1 GI:115450098 GeneID:4331284| Length = 3992 ...")
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Gene Name

Os03g0101100

Description

Similar to Palmitoyl-protein thioesterase-like

Version

NM_001055185.1 GI:115450098 GeneID:4331284

Length

3992 bp

Definition

Oryza sativa Japonica Group Os03g0101100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:84875..88866

Sequence Coding Region

84955..85048,85165..85225,85375..85426,85554..85574,85662..85715
,86140..86190,86348..86410,87048..87113,87190..87228
,87493..87615,88251..88343,88437..88661

Expression

GEO Profiles:Os03g0101100

Genome Context

<gbrowseImage1> name=NC_008396:84875..88866 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:84875..88866 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgcttattccctcgtcttcgtcttcgtcggcgtcgccgtcttcgtcctcgcgccaccagcctccgccgtgcccttcatcgtcctgcacgggatcggagaccagtgcgccaaccatggtgtcgccaagttcacccgccttctcgccgactgtgaaatcggaagtggaacatgggactcttggttaatgcctcttcagaaacaggctgatattgtttgcagtaaggtaaaagaaatgaaggaactctccaatggttacaatatagttggtctttcacaggggaacctgattggtcgagcagttgttgagttttgtgatgatgggccaccggtcaagaatttcatttcactcggtggccctcatgctggtactgcttcagtgccactttgtggttctggtattttttgcattcttgctgattccctgattaaaatggagatctactcagactatgtccaggcacatcttgcacctagtggttacatgaaaatcccaactgatatttcagattatttaaagggttgtagatttcttccaaagcttaacaatgagttaccaggtgaaagaaatgccacctacaaggaaaggtttagcagcttagagaatttggtattaatcatgtttcaggatgacgctgtcttgatacctcgggaaacagcatggtttggttactatccagatggaggtttcgatcctgtcctgccccctcagaagacaaagctgtacatggaggactggattggtctcaagacgctggatgatgaggggagagtgaaattcgtgtccgtgccaggggggcacctgggtatttccaagactgacatgatgaagtacatcgtgccctacttgaagggaaaggacaatggaaaggcttggattgctgcgacttggcgtgccatcaccaacaccatcggtggggaagcgtttgtgctcaactag</cdnaseq>

Protein Sequence

<aaseq>MAAYSLVFVFVGVAVFVLAPPASAVPFIVLHGIGDQCANHGVAK FTRLLADCEIGSGTWDSWLMPLQKQADIVCSKVKEMKELSNGYNIVGLSQGNLIGRAV VEFCDDGPPVKNFISLGGPHAGTASVPLCGSGIFCILADSLIKMEIYSDYVQAHLAPS GYMKIPTDISDYLKGCRFLPKLNNELPGERNATYKERFSSLENLVLIMFQDDAVLIPR ETAWFGYYPDGGFDPVLPPQKTKLYMEDWIGLKTLDDEGRVKFVSVPGGHLGISKTDM MKYIVPYLKGKDNGKAWIAATWRAITNTIGGEAFVLN</aaseq>

Gene Sequence

<dnaseqindica>81..174#291..351#501..552#680..700#788..841#1266..1316#1474..1536#2174..2239#2316..2354#2619..2741#3377..3469#3563..3787#gggttggagaagttgggggttggggggttgggcgaggaggaggaagaggagtacaagaaagaaagaaagattagtagtagatggccgcttattccctcgtcttcgtcttcgtcggcgtcgccgtcttcgtcctcgcgccaccagcctccgccgtgcccttcatcgtcctgcacggttagactcagtcaccccgtccgtcccttggcttccaacacctactattatgatggagtacttcggtttgacaagtagcagctactgatactcctcctgccgtgccgtgcgtgcagggatcggagaccagtgcgccaaccatggtgtcgccaagttcacccgccttctcgccgactggtccgcctcccatggctactgcctgtactactacactacactacatctctctttctttctttttcagtttccttcccttctcaattagattaattaattaattaattaattacttgtgctactgcctgctaatgatggaaaacgcatagtgaaatcggaagtggaacatgggactcttggttaatgcctcttcagaaacaggtccactacttgacttcttcaatctagctagcctaggaatcttgtttacctactagtaccagtaataaaaacaactctttctatattctttccacatagtactaatttctccctcatgtctcaacaggctgatattgtttgcagtaaggtgattcaactttcccttttggataataccttcctacgctatgatgatgtatgtatcatcactggattgtacccttttcttttccaggtaaaagaaatgaaggaactctccaatggttacaatatagttggtctttcacaggtatactcttgcactgctgtctgtattgtttatggttcgcgccacttccttttaccaactgcaatgctatgcagctgttttttttccacctgctgtatattctctaagaacagagcactagttactcaaaacattacaggaagaaaaatgattccatatcaatcgttaatctaatttgctctctgtttttgtatgctcattttaattctcatttctatcacaaatttgttcaggaaaaatgctacacttttcatgtgactagtggattagtttgttataagtcgttggttattactgcctccaggcacaagttagtgacatattgggcattgcatctgtccccactccaaaaagcaacttcagtcactaacttctgttttaatgtattctcaaaacctagtaaccccttgtatcatatccacaggggaacctgattggtcgagcagttgttgagttttgtgatgatgggccaccggtgagttgtcctttctgggtacaaagaacagttttttttttaggtgtgtgtgttttttagggggtgtccccctcttgactccttttctgccctcctaccttgaatctaccatgtacttgacgttacaatgctcttcaatctcgtggtgcttcaacaggtcaagaatttcatttcactcggtggccctcatgctggtactgcttcagtgccactttgtggtgtaagttcatctcattgtttccaagtgatacctagtttgtgatgaaaagttaaaatttaataatccaagattgtgcatggatcttctcagatgacacatacactcattatctattaaaagtacttggtactgacaaggtagactaacaacatcagtatgtggcatctcttatttacctgaatgctatgactggtgaaattccaccatcaccacatcacaaataatgtatgccaacctatatatatggacatatatccatccacatgtttgctccaaaatggaaagttattagcattggtggtgtgtagggatggtaatgtgcatttagtccatttttccaatctgatgcaggcttgcagagcttgaaaactggtactagatcagatatatcgtttttagcatttaggtaactcaacttgattcttgagggacttggcatgattaggagatatgattggtcacacaatgggtgagctgctaggatctttaagattatgccaaaccttgtaatattgttactgttgtaaagaatgtgaactctgcctggttacagttatttcacaagaatacatgtgtggtaccttgatgttaattttactgcagctacctataatagctcatctttgtttatttgcagtctggtattttttgcattcttgctgattccctgattaaaatggagatctactcagactatgtccaggttcgtgtagtcatttgcacttgaaaatacttaggtggattttttgtggaataatttattgaatggtgaattgcaggcacatcttgcacctagtggttacatgaaaatcccaactgtgagttttttatgacttgaattcttttttgtcatcaccctgaagacataatgctttttatgttgcttggttgaaattttaatttgatttttcaattattgccttgtagttacaaactatcagaaaaaaaattataagttagtaaaatgatgaaaacaccgatctttcttcaaggcatgataattactggaaatagaatttgatgtgtatttatgttaatgtttcgattaactgaagtttgcataaccttcctatgcttttcaggatatttcagattatttaaagggttgtagatttcttccaaagcttaacaatgagttaccaggtgaaagaaatgccacctacaaggaaaggtttagcagcttagagaatttggtattaatcatggtaagtttaatatagtccaaggttgtattttgattatgttcatgttcaacctccaagactgttggtagcatcggtttataagcgtcaacaattgtgttccttaactccttggtatctacttaggtttatccgatttctacttgtatagcgccctgactgttctagaattctggagcatatcaccagggtatagttgtatggacccatcagcagtaccctggtggcaataagataagttgggtagattgttggccgatgctgatcccctgctaacctgtttgctacctctgttccatggctaaacttgcttcatatgtggagctggagctcatgcagcaagccagcaacttggagttgttcatcattgtggtgtcaccgcatgtgttgaccattagttctatattagattaagttaataaaatctaatgagtttatgatattataacagtgctttcgaagagaaatctacacataatatttcattttaaactaagcatttgggaaattattgatggtccaatttttaagagtttgactaaatcttgtcctaaatgtaaaatatttatgaccagaggggggtaatttattactcattagtctgcctttagtgtgtttatccattgtttaatgtttagtttcaggatgacgctgtcttgatacctcgggaaacagcatggtttggttactatccagatggaggtttcgatcctgtcctgccccctcagaaggttgagccttgcattgcatgtagtgcaaatggaatgaagtaaatcctctggccttaacattggtagcaacatgtcctggtgttgtggttgcagacaaagctgtacatggaggactggattggtctcaagacgctggatgatgaggggagagtgaaattcgtgtccgtgccaggggggcacctgggtatttccaagactgacatgatgaagtacatcgtgccctacttgaagggaaaggacaatggaaaggcttggattgctgcgacttggcgtgccatcaccaacaccatcggtggggaagcgtttgtgctcaactagctactagtactagtatcatgttgcagcctctttcttggctctgatgatgattgtaaaaagatacaggtgtacagtgcaggatacgcgtttcattccctgtgcaagtatatgtattcctcatcatgtatacattcaccaaactaggagttcaagtaacaagtactcctatatatgaagacaaaattgagctgatcttacatgatgg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0101100, RefSeq:Os03g0101100