Os03g0101900

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Revision as of 12:14, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0101900| Description = Similar to Phosphatidylserine decarboxylase| Version = NM_001055193.1 GI:115450114 GeneID:4331292| Length = 3908 bp|...")
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Gene Name

Os03g0101900

Description

Similar to Phosphatidylserine decarboxylase

Version

NM_001055193.1 GI:115450114 GeneID:4331292

Length

3908 bp

Definition

Oryza sativa Japonica Group Os03g0101900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:117800..121707

Sequence Coding Region

117866..117992,118403..118488,118723..118776,118865..118930,119007..119067
,119457..119566,119663..119913,120250..120356,120442..120509
,120624..120701,121070..121198,121341..121520

Expression

GEO Profiles:Os03g0101900

Genome Context

<gbrowseImage1> name=NC_008396:117800..121707 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:117800..121707 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggaggtttagggtttggcctccatctccatcgccatggccgctgctcgcttcccgcccttgccctcactcccaccaccatcgcagtcccttccacgcctccgccaactccggcgcccgccaaggcaattttattctacctggtgcaacggcagcaactcttgtcatgtttggtattctacatgctaggcgtatgtacgaagaccaaaaagttgttgaaaggaaggagaaaggaattgagccggaattctcaccagatttcaaggcttcatttctcaggcttctgccattgcgttcgatgtcacgtttatggggatccttgatggaagtggaacttccagtgttcatgcgccctgccatctataaagcatgggctagagccttccactccaatttgcaagaagctgctatgccactagaagaatacccttctttacaggcattcttcatccgtagtctcaaagaaggttcaaggcccattgatgcagacccaaactgtctggtgagtcctgtggatggtaaagttctgcggcttggagaacttagaggtccaggaaccatgattgagcaagtgaagggcttttcttattctgctgcttctcttctcggtgcaagttcatctcttcatggtgctgaagaagaagatttttctagagagcatacagaacaaagtaatcccgcagattcaaatgcaaaatcatggtggcgagtatcagtggctaaacccaaattatgggatcaaactctgctgagcccaaagaaaggcatcttctattgtgtcatttatttacaccctggtgattatcatcgagttcactctcctgttgattggaacattataaagcgccgacatttctcaggtcatctcttcccccaaaatgaacgtgccgtgcggaccatcagaaacttgtatgttgagaatgaaagggtagtacttgaagggcagtggaaggaaggctttgttgcaattgcagccattggtgctactaatgttggctctatcaaactatatattgaaccagagctaaggacaaatagggcagggtcgaagatactgaactcccagcctgagcctcctgatgatcgagtttatgaacctgtaggcaccggtgtgatggttaaaaagggggaagagatagcagggtttaagatgggatcgacggtggtgatggtatttgaggcacctgtagtgtccaaggcaagatggagagaggatggcagtggcacggtaacgtcagatttcgatttctgtatcaaggctggcgataggatcagggtaggagaagccattgggcgatggacatcgcgggaatga</cdnaseq>

Protein Sequence

<aaseq>MRRFRVWPPSPSPWPLLASRPCPHSHHHRSPFHASANSGARQGN FILPGATAATLVMFGILHARRMYEDQKVVERKEKGIEPEFSPDFKASFLRLLPLRSMS RLWGSLMEVELPVFMRPAIYKAWARAFHSNLQEAAMPLEEYPSLQAFFIRSLKEGSRP IDADPNCLVSPVDGKVLRLGELRGPGTMIEQVKGFSYSAASLLGASSSLHGAEEEDFS REHTEQSNPADSNAKSWWRVSVAKPKLWDQTLLSPKKGIFYCVIYLHPGDYHRVHSPV DWNIIKRRHFSGHLFPQNERAVRTIRNLYVENERVVLEGQWKEGFVAIAAIGATNVGS IKLYIEPELRTNRAGSKILNSQPEPPDDRVYEPVGTGVMVKKGEEIAGFKMGSTVVMV FEAPVVSKARWREDGSGTVTSDFDFCIKAGDRIRVGEAIGRWTSRE</aaseq>

Gene Sequence

<dnaseqindica>67..193#604..689#924..977#1066..1131#1208..1268#1658..1767#1864..2114#2451..2557#2643..2710#2825..2902#3271..3399#3542..3721#gcaggttaagccaaacacacacgacctttgttatcggcatcgccgtcgcggcagtgaagaagggagatgaggaggtttagggtttggcctccatctccatcgccatggccgctgctcgcttcccgcccttgccctcactcccaccaccatcgcagtcccttccacgcctccgccaactccggcgcccgccaaggtcaaggtctccctccccctctcttctcttgtctcccccccccccccccccccaaatctttatcttattcttactcggctcgccttgttttgcatcgatttttatccgcttcacctgcccggagtgctaccactagcactaccagtattagtataggtacatgtagcagcagccagcagctcatcaccaatcaatcccctttttcttcctttatccccttcctcaaagtgctgctttgatttcacgctgccatgtctatactttactaatctacgctttcattgcattcctctctcacacccacattgatgctatatcttctctttttaaatcatgctttcttcttattattatttgtcaatgattcattcgctgctaacgttgtgcttgcttatgataatgatttccaggcaattttattctacctggtgcaacggcagcaactcttgtcatgtttggtattctacatgctaggcgtatgtacgaagaccaaaaagtattgcttcaatacccacaagcatcatgtatcctatttctgtattgaatgttggtcaatttgcagcaacaactttaatttatctgctcaattttaaattgttaatgttaaacgtttacgttttcaaatatttggactgacaactttgaagcacattatctagctagcctggtttgcaattttgcataaaaagcacatactgctatcctttcatccttttatttgatgatttaggttgttgaaaggaaggagaaaggaattgagccggaattctcaccagatttcaaggtagtcaatagaacttggccatttgctgactattccggagctttatttgacatacaacaactgcacactgatgatattctcaatacaggcttcatttctcaggcttctgccattgcgttcgatgtcacgtttatggggatccttgatggaagtggtccgtacttttacaactacagagctgctgtattatttatttccctactcaatccaaataatttcatatcttgtaggaacttccagtgttcatgcgccctgccatctataaagcatgggctagagccttccactccagtatgtcttctcctgttatgatgctttcttatattacagttcattaggtaatttcactctgatgattgacttgcattttagagtatctagtgcagaggttgtgtgcctgcacactgctagattgactttgaaatatatttttttgaccaaaatgactttgaaatatatgcagttttagactttttagtgcattggaatgagtagtacacattattcttgatataacacatgaatacttgctattcccgtgaggcaagtttttggcaagaacttgcttctccatagatagtgcaatgcttctaagaaagtcatgcttagttagtagcacttctttcagaaatttatgtgccatctttctgaaataaaatgatgattgttgagtactgtagatttgcaagaagctgctatgccactagaagaatacccttctttacaggcattcttcatccgtagtctcaaagaaggttcaaggcccattgatgcagacccaaactgtctggtaactggtaacaatatatttattctgcatagcctgtttattaatgtggtgataatttgagactgatgtgctaggtgcattccattttacaattaggtgagtcctgtggatggtaaagttctgcggcttggagaacttagaggtccaggaaccatgattgagcaagtgaagggcttttcttattctgctgcttctcttctcggtgcaagttcatctcttcatggtgctgaagaagaagatttttctagagagcatacagaacaaagtaatcccgcagattcaaatgcaaaatcatggtggcgagtatcagtggctaaacccaaattatgggatcaaactctgctgaggtaactatgcttgtatctaaatttacaatttctaaaataactgcataagctggtttggcatcatataacccttcagttttaaggaatatattgctaaccatgtggaacatttggcgtcctgagtgatgtagttgctatgccttctgtagctctaatagactagtaggcaccctttcagcagatatgctgtttatcttgttctgaggtttccttactgctgtagcaatgtggcatgatttgtgctcccaaagtcccaagtagcaaagtttactgaatgtattcatattcagacatattgccgggttatgggtattaacttcaacttattcttgtcagcccaaagaaaggcatcttctattgtgtcatttatttacaccctggtgattatcatcgagttcactctcctgttgattggaacattataaagcgccgacatttctcaggtttgtgtttattgtttcctgttgcacatctccctatctcagacttcgtaagaactcgagtgtgataaatgtattgtatttgtaggtcatctcttcccccaaaatgaacgtgccgtgcggaccatcagaaacttgtatgttgagaatgaaagggtaatttcactttctgtcaagaaaaggaaacaagttgaatcagaaatagttctctcaatttcagcagcactatgttcctactgaatctatttaaagtatttatggtaaccgtaggtagtacttgaagggcagtggaaggaaggctttgttgcaattgcagccattggtgctactaatgttggctctatcaaagtactctctctctctctctctctcagtgctttacgtatcaggaagtagatcaggcaggctatgcctttatgcattgcctctaattgcaccgttttcatgatgtgctctgcattgatagtagattggtagcagttgcaaattaagattatccattgccatgtctggtagattgggatctgaatattataccaaggaaaggagagatgcaatctttttctgtagttgtttaaataaattggtacatcgaattgcagattaacgctgtgatattattcagtttgtcctccatggacacatgatgaggatatgtgcaagttacgcatttgatgaatacaaatattttactgagtgatactcatattttgcagctatatattgaaccagagctaaggacaaatagggcagggtcgaagatactgaactcccagcctgagcctcctgatgatcgagtttatgaacctgtaggcaccggtgtgatggttaaaaagggggaagaggtagggaaatgtcatcccagctgcttggtacaatgcgtgttaaagttttttgttattattattatactacatactacatactagaatagtagtttgtggtgcaatattgtgaagagcaattggtgttgtggaccattggcagatagcagggtttaagatgggatcgacggtggtgatggtatttgaggcacctgtagtgtccaaggcaagatggagagaggatggcagtggcacggtaacgtcagatttcgatttctgtatcaaggctggcgataggatcagggtaggagaagccattgggcgatggacatcgcgggaatgaatgaatgaaggcatggcatggcatctctctctatatatcttgtgttaacatgatggatgatgagtatcgtcgtcgtatcaatgtctctttcgtttttatttttgagctgcggtgccggtgcatgctactacaaaaagacttgtatcttctgtagggaagtaaaggaaactattgccattttgacttg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0101900, RefSeq:Os03g0101900