Os03g0102400

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Revision as of 12:14, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0102400| Description = Conserved hypothetical protein| Version = NM_001055197.1 GI:115450122 GeneID:4331297| Length = 5250 bp| Definition ...")
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Gene Name

Os03g0102400

Description

Conserved hypothetical protein

Version

NM_001055197.1 GI:115450122 GeneID:4331297

Length

5250 bp

Definition

Oryza sativa Japonica Group Os03g0102400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:148227..153476

Sequence Coding Region

148650..148709,149000..149074,149343..149408,149737..149793,150422..150537
,150821..151103,151413..151468,151585..151682,151776..151813
,151910..152024,152233..152291,152436..152469,152745..152818
,152892..153077,153174..153338

Expression

GEO Profiles:Os03g0102400

Genome Context

<gbrowseImage1> name=NC_008396:148227..153476 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:148227..153476 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>agggaggggaggggggcgatcgaccagaccaccatggtgcgagcagcgtcaggggcagatccaccaccattcctccaaacacgcatggtggacatgccctcctcctcctcctcctcctcctcttccctctctcaatctcaatctcaatctcactcccactctcagactcacaaggagaaggagaaggagaaggagaaggaggaggagcaggaggaggagaagccctccccctcccgtaacgcctcctccaagtacgacttcgtcaaggtcaaggtgtggcttggcgagaatgccgatcactactacgtcctctccaggttcctcctctgcaggatgctcaccgtcaccaagattcctaatcatgttgccattaagattgcccttgaactcaagaaattgcttgtcgacaacagcctccttgatgtttctcagagtgacttagaggctaacctatttaagctcatggagaagcggggatacggcgaggattatattaatcggtataaaatgatgaccagattccatcatcaaagagtaccactagtagttttagtgtgtggaactgcttgtacgggaaaatcaacaattgctacgcaactagctggaaggctgaatttaccaaatgttttgcagacagacatggtgtatgagttgctacggacatcaacagatgcccctcttacttcggtgcccgtgtgggctcgggattttgattctcctgaagagcttatcacagagttctgcagagaatgcagagttgttcgcaaaggtttggctggtgatttgaagaaggccatgaaagatgggaagccaattatcatcgagggaattcatttggatccaagtatttatttgatggacgaggaaaagagagatgataattccaaaatggagaagaaggtagctgaatctgaaaattcaccagcaactgtaaagagcaagacagaaaagcaacaagaaaacgaactacatgagaagagaatggatgacagtcaggagtgcatgtctgaggagggtagaataagtgaagggctatcttgtgctaaaagccacgtaattagctcttctgatcctgcatgttctaaagagaaaaatcccagagctgaaggtgaaggacataaggatttggacctacagaaaaacaacgccaccaagaaggacaaacctgctgctaaaccaataatagtcccaattgtgttgaggatgtctgattttgatcacaaggcattgttagaggaatggatagccaccagggcttccagggataattgtcttcctcaggatcatcgaaagcttataaacaaccttaagcttattcaggactatctttgttcttttgaatcacagggattgaccgttgttgacatttcagcgaactcattccctcagacactagattggcttcacagctatcttcttcagtgcatcgaacgtggccttttggctgcatgttcagaaagtcccaagcaaggtgggagctaa</cdnaseq>

Protein Sequence

<aaseq>REGRGAIDQTTMVRAASGADPPPFLQTRMVDMPSSSSSSSSSLS QSQSQSHSHSQTHKEKEKEKEKEEEQEEEKPSPSRNASSKYDFVKVKVWLGENADHYY VLSRFLLCRMLTVTKIPNHVAIKIALELKKLLVDNSLLDVSQSDLEANLFKLMEKRGY GEDYINRYKMMTRFHHQRVPLVVLVCGTACTGKSTIATQLAGRLNLPNVLQTDMVYEL LRTSTDAPLTSVPVWARDFDSPEELITEFCRECRVVRKGLAGDLKKAMKDGKPIIIEG IHLDPSIYLMDEEKRDDNSKMEKKVAESENSPATVKSKTEKQQENELHEKRMDDSQEC MSEEGRISEGLSCAKSHVISSSDPACSKEKNPRAEGEGHKDLDLQKNNATKKDKPAAK PIIVPIVLRMSDFDHKALLEEWIATRASRDNCLPQDHRKLINNLKLIQDYLCSFESQG LTVVDISANSFPQTLDWLHSYLLQCIERGLLAACSESPKQGGS</aaseq>

Gene Sequence

<dnaseqindica>4768..4827#4403..4477#4069..4134#3684..3740#2940..3055#2374..2656#2009..2064#1795..1892#1664..1701#1453..1567#1186..1244#1008..1041#659..732#400..585#139..303#ctcctcttcttcttctttcctctcctgtgattctgtgaaggaatggtggtggtggaatcaatcaatcaatcgatcgatcaatcaatcgtgcaagggaagaagggaatcaaaatcgttttctttttgtttgttttttgaagggaggggaggggggcgatcgaccagaccaccatggtgcgagcagcgtcaggggcagatccaccaccattcctccaaacacgcatggtggacatgccctcctcctcctcctcctcctcctcttccctctctcaatctcaatctcaatctcactcccactctcaggttcttcttcttcttaattccatctactgtttatttgctaataataagtagtaattcattcctcactctctcaatccgattcgcattcgcatgcagactcacaaggagaaggagaaggagaaggagaaggaggaggagcaggaggaggagaagccctccccctcccgtaacgcctcctccaagtacgacttcgtcaaggtcaaggtgtggcttggcgagaatgccgatcactactacgtcctctccaggttcctcctctgcaggatgctcaccgtcaccaaggtcacatccccccctcccctcttcatggctgctgggatctcatcatcccatgacggattcctcttcttttcagattcctaatcatgttgccattaagattgcccttgaactcaagaaattgcttgtcgacaacagcctccttgatgtgtatcttcatcttccccttctcactatcttttctttttcttattataccaacaatacattgcactcactgcttactacctttcaagttttagttttccttttatctatctactccgtatcattttgacgcaccattgttgctgttattgttttgggacactccactcatcctccttgccatctgtataatatacaatgctgctcctcctgttttttacaattatgtgtgtggattgcctcttgggtttacactaatatagcttggaatcttgcagttctcagagtgacttagaggctaacctatttaaggtgatttcttttttactttcttgttattatctcttcctgttctgtgcatgtctttttcttttcctgtggcctcgagtgcgcgtctgtgttttgggtgttaaagatgctcgtcaatttctaactcaaaaggcactacttttgcagctcatggagaagcggggatacggcgaggattatattaatcggtataaaatgatgaccaggtatttgcaacgtgatgtttgtaacatcactacgataatcctgaactaataaaaaatatgcacataatttggtttgtccgtgattcatactcttatctgcgtaaccgctccattttgcaccattatgacattcatgttatgtttaccctcgcaaacttctacttcagttgcatttggacagtatgtttatgctctatttgtcttgcagattccatcatcaaagagtaccactagtagttttagtgtgtggaactgcttgtacgggaaaatcaacaattgctacgcaactagctggaaggctgaatttaccaaatgttttgcaggtttattttccttttctgttgcatttatcatgttttatgttccaatattgttatagtttctaccttaccaacgcatttcctgattgtaacatatagacagacatggtgtatgagttgctacggacatcaacagagtaagttgtttcatttctttcgtctccattatccgttgctatataatctctttgtttcactcttggcccccaccccctcttctctctttgcagtgcccctcttacttcggtgcccgtgtgggctcgggattttgattctcctgaagagcttatcacagagttctgcagagaatgcagagttgttcgcaaaggtatgtgatatcttgtggggattttttttgttcacaataaattgttctctgcatcggatatgattggatactggttattcactgggttgttttctggttgtctaaatattgattaggtttggctggtgatttgaagaaggccatgaaagatgggaagccaattatcatcgaggtatgatgtcttgcctcttgatcactcggtcaaccatggtccacgcgtcatatatgcatgactgacaaatcccccaacaaccccatcagaccacactacctcctgtacatgtcattgtgtgacatggctatgaaggtcaggaggggtgttggtgctgcatagatccaccggtagtacttatctgcattttgttagtgctgcctcacaagtaagcacagaacatgtaaccatcaatttcttttaacagcatgaccctgtgcatatttctatatagattatatctaatattaacaaatattttcattgcagggaattcatttggatccaagtatttatttgatggacgaggaaaagagagatgataattccaaaatggagaagaaggtagctgaatctgaaaattcaccagcaactgtaaagagcaagacagaaaagcaacaagaaaacgaactacatgagaagagaatggatgacagtcaggagtgcatgtctgaggagggtagaataagtgaagggctatcttgtgctaaaagccacgtaattagctcttctgatcctgcatgttctaaagagaaaaatcccagagctgaaggtaagccaaatggaagtaaattttaaatcccagaggggaaaggtcagtaaaaacaccacaaggttcatgcagactaaagcaagtttaatttgtattactatgtagtatgcactagttggacaatataatctaggtgcaagtagggagaatgcccaatataagaaaacaagtgtgcaaaagacccaatcatacactattccagtattccaaatacctgactaaccaggccggtttgttagttccgatcgcactgctgaggggagatcacgctgctgttttgtaggtgaaggacataaggatttggacctacagaaaaacaacgccaccaagaaggacaaacctgctgctaaaccaataatagtcccaattgtgttgaggatgtctgattttgatcacaaggtctgttttctctgtgtcacaaatttagatacttgtctgctcttttttttattaaattaaacctagttccatattgggaaagaggagttcgcataagatgcgataatgataggctcaaggcaagtgattgccctgcttactgtggttgggttcatccccagccagccagccaactgtggcaggaggctccgatcccccaaactttggatttaatttggtctttgatgatcaaccaagagacatatgccagccttgatagtttatctgccaactaacaaaccaactaactggagaatcatattcctaaccaagcaataacctagtagaaacttgactaacaactaaatcattccttggcatcaatgatgctggatgctgtctgttctggtttgtcctctcactccaatgaattcgtccacaactgttgagttttaaacctatctatttttatttcacatcagtgccacctctgaaaactattgagtagaataagggaatggatgcaggctcccagtaatcaatacccgatgtcatggatgcttgttttttatatattccgcacttgtcatttgtttcatttgtttatattcactattcacattcagattggctttgttgttttgttcaggcattgttagaggaatggatagccaccagggcttccagggataattgtcttcctcaggtactcatataagttagtgcacaatggtttcttgtttcacgccaggaaaaatgccatttaatccggatgcttgtaatctgcacctgtcattgaatgattataacatcttgctctatgttagacaacttataaaaaataggacctaacagtgaaatgccacatgtgctgcacattgtgacttttagtagtattgctgacagtaagaattgattcatcattatacaatggtaaggactaatatgtgtacttctcttagtaatgtactcagctttgttagctcatttgagtaagatctgactttgtgttatgtgaacttcccattgttcaggatcatcgaaagcttataaacaaccttaagcttattcaggactatctttgttcttttgaatcacaggtgatttttcctttattactgaaaatcatgaattcttttcaaaaaaaaaaaatctacctactactgcatgcagttgccaaccatgtactcgtgcaatcattttaatggagtaaatatgttctagttcaaaaaatggtttgatgtatatttttttcatgtacccttcatgtgctgttgttttctcccagtaagatgctgcattcatttatctcgcattggattaccatttgggttcagtattttcttaccttttgttaaatgtattcagggattgaccgttgttgacatttcagcgaactcattccctcagacactagattggcttcacagctatcttcttcaggtacctgagaaaagggcatatcctaacgtgctttccaacataacttttttttcttttacgaattagtcaattgacatgcacaacaatataacaaaacattgaccaaatgataagttctaaaccattatttatctataacaggtcttttatcaagctgtcatatataatttacttaatgaagcttcatgtttttttcaaaaaaaaaacttataagcttgatttgacaatatatttattatttagtagtgaattggtcattgatttcggtgttattatttattacttgacagtgcatcgaacgtggccttttggctgcatgttcagaaagtcccaagcaaggtgggagctaacggatacggacgaagcccgcattagtgttgcttaagatatattggttggtaatcaggaacgttggcagtggtagagaactccatagttggataaaagctttttagaggtggatcggtaaaatgaaaagaaactcaaggccggtgaaataatgcgatcactcacatagacataagttttgtttttccccgagctcccagagataatagatactagtactgtagtacatctcgcagaattgagacgagtatgctcaattaattgagcgaaaagacgagtataaagaggtcaatctcgggtcatccaacatatcaacaaactcgatcagcaccttgtcaatctgtggtccacagcgtataaaaggtcggctccacagcttgtaacgtggattctgaaacatcattttatcatcatcatcatcatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0102400, RefSeq:Os03g0102400