Os03g0102700

From RiceWiki
Revision as of 12:14, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0102700| Description = Beta-expansin precursor| Version = NM_001055200.1 GI:115450128 GeneID:4331300| Length = 1742 bp| Definition = Oryza...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0102700

Description

Beta-expansin precursor

Version

NM_001055200.1 GI:115450128 GeneID:4331300

Length

1742 bp

Definition

Oryza sativa Japonica Group Os03g0102700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:167850..169591

Sequence Coding Region

167900..168343,168567..168751,169076..169430

Expression

GEO Profiles:Os03g0102700

Genome Context

<gbrowseImage1> name=NC_008396:167850..169591 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:167850..169591 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgggcaggagcaggaggaggtcgttttggtccgtgggcgttgcggctgctctgctttgtctgctggccgcccatggctgcagcgccaagcatcacaagcccaagcctactcccggtggcatcagtggcaatgcttcttcttcctcctccaattccagcacccccagtattcctcctcctgttgcccctactcctactgctcctactcctcctattcccagccccggaactggaagcagcaacggcagcagtggcggtggcggcggcgggtggctgaacgcccgtgcgacctggtacggcgctcccaacggcgctgggccggacgacaacggcggcgcgtgtgggttcaagaatgtgaacctgccgcccttctcggccatgacttcctgcggaaatgagcctctcttcaaggacggcaagggatgcggctcctgctaccagatccgatgcgtggggcacccagcctgctcggggctcccggagacggtgatcatcacggacatgaactactacccagtgtcgctgtaccacttcgacctcagcggcacggcgttcggcgccatggccaaggacaaccgcaacgacgagctccgccacgccggcatcatcgacatccagttcaggagggtgccttgtcagtatccagggctgacggtgacgttccacgtggagcaagggtcgaacccggtgtacatggcgatactggtggagtacgagaacggggacggggacgtggtgcaggtggacctgatggagtcgcgctacagcaccgggggcgtggatgggacgccgacgggggtgtggacgccgatgagggagtcgtggggatcgatatggaggctggacaccaaccacccgctgcaggggcccttctccctccgcatcaccaacgagtccggcaagaccctcatcgccgatcaggtcatccccgccgactggcagcccaacaccgtctacagctccatcgtccagttcgactag</cdnaseq>

Protein Sequence

<aaseq>MAGRSRRRSFWSVGVAAALLCLLAAHGCSAKHHKPKPTPGGISG NASSSSSNSSTPSIPPPVAPTPTAPTPPIPSPGTGSSNGSSGGGGGGWLNARATWYGA PNGAGPDDNGGACGFKNVNLPPFSAMTSCGNEPLFKDGKGCGSCYQIRCVGHPACSGL PETVIITDMNYYPVSLYHFDLSGTAFGAMAKDNRNDELRHAGIIDIQFRRVPCQYPGL TVTFHVEQGSNPVYMAILVEYENGDGDVVQVDLMESRYSTGGVDGTPTGVWTPMRESW GSIWRLDTNHPLQGPFSLRITNESGKTLIADQVIPADWQPNTVYSSIVQFD</aaseq>

Gene Sequence

<dnaseqindica>51..494#718..902#1227..1581#agcaagcaaagctaatatacataaattgatccagggatcgatcgaaattaatggcgggcaggagcaggaggaggtcgttttggtccgtgggcgttgcggctgctctgctttgtctgctggccgcccatggctgcagcgccaagcatcacaagcccaagcctactcccggtggcatcagtggcaatgcttcttcttcctcctccaattccagcacccccagtattcctcctcctgttgcccctactcctactgctcctactcctcctattcccagccccggaactggaagcagcaacggcagcagtggcggtggcggcggcgggtggctgaacgcccgtgcgacctggtacggcgctcccaacggcgctgggccggacgacaacggcggcgcgtgtgggttcaagaatgtgaacctgccgcccttctcggccatgacttcctgcggaaatgagcctctcttcaaggacggcaagggatgcggctcctgctaccaggtacgtacagtacacaattaatctcgatcgatctatcttcttgtctgaattatatatattcattcattcattctcagccagccaattcaaataattctcttctcatcgatggatgcggtagctagctctagtgtgcaggtcgatgagcccgtgacacatatgtactgatcgatgcatggactgagtggctgtaaattaaattaaatggatggatgtgatgcagatccgatgcgtggggcacccagcctgctcggggctcccggagacggtgatcatcacggacatgaactactacccagtgtcgctgtaccacttcgacctcagcggcacggcgttcggcgccatggccaaggacaaccgcaacgacgagctccgccacgccggcatcatcgacatccagttcaggaggtaccatctaaccgcaataaccaacttaactgcatgccctccctggtcgggactcgggacccgacccaccccactagtacttaattttctttactgtaacgaacaacgaagacatgctctctgctggggcccacaacaaacaaccaaccactaccactaactttctctttgcacttttgcacctaaaaggctttagttctcaacttttaattttttccgttcaaatttatttaacttttagctagctattggtattgcaaattaattaactgaaaatcgatcgaaagagaagtaagtaaaacaaatagcgaaatgaaaatgcagggtgccttgtcagtatccagggctgacggtgacgttccacgtggagcaagggtcgaacccggtgtacatggcgatactggtggagtacgagaacggggacggggacgtggtgcaggtggacctgatggagtcgcgctacagcaccgggggcgtggatgggacgccgacgggggtgtggacgccgatgagggagtcgtggggatcgatatggaggctggacaccaaccacccgctgcaggggcccttctccctccgcatcaccaacgagtccggcaagaccctcatcgccgatcaggtcatccccgccgactggcagcccaacaccgtctacagctccatcgtccagttcgactagctaattactactactccactccttgccattaattagtatatactccattatttgccatttgcacatcatcgagacgtcgcttgtgacgtccgtttcagtgcgtatatgcatgttgtactcctccttacttgattacatgtatgcatgcaaattaatgaatc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0102700, RefSeq:Os03g0102700