Os03g0106200

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Revision as of 12:14, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0106200| Description = Conserved hypothetical protein| Version = NM_001055218.1 GI:115450164 GeneID:4331320| Length = 5310 bp| Definition ...")
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Gene Name

Os03g0106200

Description

Conserved hypothetical protein

Version

NM_001055218.1 GI:115450164 GeneID:4331320

Length

5310 bp

Definition

Oryza sativa Japonica Group Os03g0106200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:340052..345361

Sequence Coding Region

340566..341110,341216..341465,341548..341651,341730..343257,343997..344058
,344580..344730

Expression

GEO Profiles:Os03g0106200

Genome Context

<gbrowseImage1> name=NC_008396:340052..345361 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:340052..345361 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaagagaagtcaaagactggctaggcgtcaggagaacataggctgcatgtggggcctcatcggcatgctctatttccgacgtgacgctaagtttctgttggacaggaagcaaggaagcagaaggcacactttcggtgggctttcaggtaggaggcactcaagaaagaaatccagggactttgaagaaacagatgaatatggggaggataacatagaggaatgcgacacaaggaaacaaaccgtcaaaagactcatggaggacgagctgggtaaggtaaaacaggtgaaaaagattcccaaggaagaggttcaaagaatattagctgacctgggacatgatgtctgtctggaaaaaagttcaatgcagagcaccaaacaaaacagagccaaaagtcacagcacaagcacagccatggcttctccgtctggtttgctggatccaagtggttccaaatccatgaaacaggcagaagaagatgatcttgaactttctttagcagattttgtgggagaactctatgggtaccatgatgattgcaaaaataagagtgaactgtgtccagaattgaagtcacatatccatacaaagcttagtgagttgaagagtgtgccctgtcaacgtgcttatgaggaatctccagactgggggcaaagggagcatttctatgaaaaatatatttgtaacagcagatcttatcaatctaacaaactagtagatgcaccagatatgctaagcccagagaaggaacttttcttgaagacacttcagaaaccgagtccgcatactttggagaaggagaacacccaaaataatcaaaacagacaggtagtgaccaagttagagccaaggaaaattcttgaaaaaggtgaaaatactaagaattcaaaacagcacgaggtagccatcaaaacacatagtaaagagggcaggaatatctttttctggaggaaagataaatcaattatgaagggtacatcagaaggaactaatagtagtaagatggttaacaaaatagttatactaaagccaaatccaagagggatcgatactactgtagctacagcctctacatgtttagatcagcaatcatgcacaattcaatctccaaaataccctgcaacagagagttctaaattttcaattaaggaagtcaggaggagattcaaaattgtgactggtgatactagaagaggaagaccatcagtgtatgaagatgatttacaaagagattcacaaaggatcaatgattcagtctttaaagtcagaaaggattctaaacagtcagataaggacaatttgagacctttgaccagtggtaagcaaaagcaaaggaatgatggactaggtgaaattaacggagacataattacatcaaaggatacatccatcttctatgaagaggcgaagaaacatctgacagacattctagagtataacagtcatacaaccaagcatccaacagttcatacctcaaagtccttgataggaatgctttccctccctcaacgcaacgcatcatcacctaggagtagccccaggttaaaaggccgcattgacctttcacccgaagagataaatatttctgccattcaacaggatgagaggacagaatatgcaaaagaaagagatctgtctgacgaagattcagggagtgttgcatgtggtaatagtgaagtactagatggtaaggctgatcaggatagacactccatgaaacaagaaactgcacaagatggtgacattatgcatattgaagaaatcgacaagccggcttgctccgaaacgatttgcagtgaagggatcaccctaaaagagcagtgtacatgtacctcatcactagaactgattgaaggagccgaacctggcagagagcatgcagggatgttgctgagctatcctgagaatgtggttgagagcctagaacaccaagagccaaaaactcccagatcaagtgcatcacttgaacttatatcacaaatttcacccgaagggaaccacgaaaagcaagagcaacccagccctgtatctgtccttgatccattcttctgtgaagatgttgacagtcctgaccatgaaactatgataaaatgtgagatgcatcaagatatgatgaggccccacataccagatgctatatcagaccaatgggtcttctgggaggacgaggatgccaggctaagttacataaaggcaatgctggagctatcagaactatgcacataccaaaatctagaggtgtggtatctagaagatgaattgatcagcccttgcatgattgaagaactacaccaaggcaatcaaacagatgatctaaagctcccttttgattgtatctgtgaagctataacaataatccaggagacatattttagaaaccctccttgcttatcttttctcatgcacaagatacagccacctccaatgggagagaacctcatccaagaaataaataagcatatcgagagacatctccataatcaatttccaagaacattgaaccagctagttaacatagatctggaagatggcacttggatgaatcttcaattggaaagtgaagagattattgttgatacatgggagttcatactagatgaactattagaagaggtcgctaatgatttgttgatttga</cdnaseq>

Protein Sequence

<aaseq>MGKRSQRLARRQENIGCMWGLIGMLYFRRDAKFLLDRKQGSRRH TFGGLSGRRHSRKKSRDFEETDEYGEDNIEECDTRKQTVKRLMEDELGKVKQVKKIPK EEVQRILADLGHDVCLEKSSMQSTKQNRAKSHSTSTAMASPSGLLDPSGSKSMKQAEE DDLELSLADFVGELYGYHDDCKNKSELCPELKSHIHTKLSELKSVPCQRAYEESPDWG QREHFYEKYICNSRSYQSNKLVDAPDMLSPEKELFLKTLQKPSPHTLEKENTQNNQNR QVVTKLEPRKILEKGENTKNSKQHEVAIKTHSKEGRNIFFWRKDKSIMKGTSEGTNSS KMVNKIVILKPNPRGIDTTVATASTCLDQQSCTIQSPKYPATESSKFSIKEVRRRFKI VTGDTRRGRPSVYEDDLQRDSQRINDSVFKVRKDSKQSDKDNLRPLTSGKQKQRNDGL GEINGDIITSKDTSIFYEEAKKHLTDILEYNSHTTKHPTVHTSKSLIGMLSLPQRNAS SPRSSPRLKGRIDLSPEEINISAIQQDERTEYAKERDLSDEDSGSVACGNSEVLDGKA DQDRHSMKQETAQDGDIMHIEEIDKPACSETICSEGITLKEQCTCTSSLELIEGAEPG REHAGMLLSYPENVVESLEHQEPKTPRSSASLELISQISPEGNHEKQEQPSPVSVLDP FFCEDVDSPDHETMIKCEMHQDMMRPHIPDAISDQWVFWEDEDARLSYIKAMLELSEL CTYQNLEVWYLEDELISPCMIEELHQGNQTDDLKLPFDCICEAITIIQETYFRNPPCL SFLMHKIQPPPMGENLIQEINKHIERHLHNQFPRTLNQLVNIDLEDGTWMNLQLESEE IIVDTWEFILDELLEEVANDLLI</aaseq>

Gene Sequence

<dnaseqindica>4252..4796#3897..4146#3711..3814#2105..3632#1304..1365#632..782#agtccactcttcacagcagggcgagaagagaagtaggagtaacagaaaacagaagaggggagagaggaaaagctactagaactgaccgaggcttgtgcaagaaaggcttctgattccttccgtcatcgttgccaaaaggaagcacagctcaggtcctagcatctcttcacatggccaacaacatgtcctgaagaattttaatgctcgtcttcatctggtttcttggttcagacttcagagtggtgaagttccctgcgatctctcggttatcacgtaagtttcgcatgaagcaatatctgtggatttgaggagtttttagcatatcttcctttgataattttgcttggttttgacagtacacaaattaataacagaacactggaacctgttggttttatgctgccagtttgctgcatttcatcttctcttgctcctgcaaaatctcatttcttttgttctttcattcttggcttgcatggttcatcgggatgaatcctaagtgttcatcagctaactgcagagtttctctcaggaaccaaacctgctgcaagaggattagctcaatgaactaaactgcagagaacatcaggcatatttcaattgcaaagtgtagaggaacaagccaactaacatggggaagagaagtcaaagactggctaggcgtcaggagaacataggctgcatgtggggcctcatcggcatgctctatttccgacgtgacgctaagtttctgttggacaggaagcaaggaagcagaaggcacactttcggtgggctttcaggtaattctctccaggttcatggttaaagtaaaatgtaatacctgatgaacatgatgacaatgcaaataggatcgtgatcatgatctgagccacttactttgctggtagaactctgaggatatggttttgaaatttaatatgcattgtggtcatctgctatacaagagactgaaaacagaatatgtaaagcattcttattattatctccagaaaaaaaaactgattactgtcagtaaatatgaaagtcgacaattttgcttctcgtttgtttgattaccattactaagcagtttgtgaaattgtgtcaactatgtgcagcaatataagtaatgcagcacctgcatggcaatacaatcaatctatgatatttgaccttcagtaaacatttttctgatgtcatagactgtcaataaatccctctaatctacatttcggaatcatctggcaaatatgaaggcattcaagaaaaatatttagttatcataatttgtatatcttcttacaactctgcatggtcgcaggtaggaggcactcaagaaagaaatccagggactttgaagaaacagatgaatatggggaggatgtaagttattttagtaagtatgtaattttaatggtaaaaagcatagatgctcatgctggtggttgctgttgtctgcttttgttaacaccacgaatatgcaacagaagtctagtgatcctaaccatacttgactattcagttacttgtgtaacaaaataattttgatgaatggaactgaaagtgccatattgatgttaatggcagtcaattccttcatgctaagtgttttcttcagagccagaacatatctagagcaagtatggagaaaagaagtcgtccaaaatccaaatgcaacatatgaacttggtactgcttcgaaaacatgcacgggaaagtttagcttaatgcaagttgtggaacaataaacttaaaaaaaaaagcatgacaaaatgatcccacatatacttctttttgcctacttatcatgtgtaggcttggatttagcaaccattattccttctttgatgaaagggacttgattcaagcattctgcattaaccagcagagaagaaaaaatttgagtagacagtactagcaatctttacattgtaatctgttgggtgagttctaaaaccagatttgcttcaagtgtatgttggcatggtaaacatcaaatagttttaactgatatagctttccatcaagcttatgtttatcatgtagacagtactacctatttcttttgatgcatgttaaagattacttcttggaataagtgtattgttcttatatttctcagaacatagaggaatgcgacacaaggaaacaaaccgtcaaaagactcatggaggacgagctgggtaaggtaaaacaggtgaaaaagattcccaaggaagaggttcaaagaatattagctgacctgggacatgatgtctgtctggaaaaaagttcaatgcagagcaccaaacaaaacagagccaaaagtcacagcacaagcacagccatggcttctccgtctggtttgctggatccaagtggttccaaatccatgaaacaggcagaagaagatgatcttgaactttctttagcagattttgtgggagaactctatgggtaccatgatgattgcaaaaataagagtgaactgtgtccagaattgaagtcacatatccatacaaagcttagtgagttgaagagtgtgccctgtcaacgtgcttatgaggaatctccagactgggggcaaagggagcatttctatgaaaaatatatttgtaacagcagatcttatcaatctaacaaactagtagatgcaccagatatgctaagcccagagaaggaacttttcttgaagacacttcagaaaccgagtccgcatactttggagaaggagaacacccaaaataatcaaaacagacaggtagtgaccaagttagagccaaggaaaattcttgaaaaaggtgaaaatactaagaattcaaaacagcacgaggtagccatcaaaacacatagtaaagagggcaggaatatctttttctggaggaaagataaatcaattatgaagggtacatcagaaggaactaatagtagtaagatggttaacaaaatagttatactaaagccaaatccaagagggatcgatactactgtagctacagcctctacatgtttagatcagcaatcatgcacaattcaatctccaaaataccctgcaacagagagttctaaattttcaattaaggaagtcaggaggagattcaaaattgtgactggtgatactagaagaggaagaccatcagtgtatgaagatgatttacaaagagattcacaaaggatcaatgattcagtctttaaagtcagaaaggattctaaacagtcagataaggacaatttgagacctttgaccagtggtaagcaaaagcaaaggaatgatggactaggtgaaattaacggagacataattacatcaaaggatacatccatcttctatgaagaggcgaagaaacatctgacagacattctagagtataacagtcatacaaccaagcatccaacagttcatacctcaaagtccttgataggaatgctttccctccctcaacgcaacgcatcatcacctaggagtagccccaggttaaaaggccgcattgacctttcacccgaagagataaatatttctgccattcaacaggatgagaggacagaatatgcaaaagaaagagatctgtctgacgaagattcagggagtgttgcatgtggtaatagtgaagtactagatggtaaggctgatcaggatagacactccatgaaacaagaaactgcacaagatggtgagtacataataccatagtcattaaaattatcaaatattacgtggctcttctctaagcacaaaggaatatttgcaggtgacattatgcatattgaagaaatcgacaagccggcttgctccgaaacgatttgcagtgaagggatcaccctaaaagagcagtgtacatgtacctcatcactagtatgttcacaccaatacttagtgatattccatctggtctccattgttgttttgagttataatgtgtttatctacactgcaggaactgattgaaggagccgaacctggcagagagcatgcagggatgttgctgagctatcctgagaatgtggttgagagcctagaacaccaagagccaaaaactcccagatcaagtgcatcacttgaacttatatcacaaatttcacccgaagggaaccacgaaaagcaagagcaacccagccctgtatctgtccttgatccattcttctgtgaagatgttgacagtcctgaccatgaaactatgataaaatgtatcttctcatctaaacatatcaaaattacatttccttttgaccttaagaaaatatgtgttctaatctaaaggtgatgtattttggtcttgcaattatccacaggtgagatgcatcaagatatgatgaggccccacataccagatgctatatcagaccaatgggtcttctgggaggacgaggatgccaggctaagttacataaaggcaatgctggagctatcagaactatgcacataccaaaatctagaggtgtggtatctagaagatgaattgatcagcccttgcatgattgaagaactacaccaaggcaatcaaacagatgatctaaagctcccttttgattgtatctgtgaagctataacaataatccaggagacatattttagaaaccctccttgcttatcttttctcatgcacaagatacagccacctccaatgggagagaacctcatccaagaaataaataagcatatcgagagacatctccataatcaatttccaagaacattgaaccagctagttaacatagatctggaagatggcacttggatgaatcttcaattggaaagtgaagagattattgttgatacatgggagttcatactagatgaactattagaagaggtcgctaatgatttgttgatttgaagcttcaatttagtcactgctggtatttttctctgctatttgtagaatggatatagaatgggtagagtcatgactcataagtagaagttatgttgatgacagtaagctgtccgcatgacagaatcaagaggaccagtggaccagacaagtattgtgtgattttactgcttgttagtttgattgatacatcttgggagcctaagaacagtaggatcttcctgacactgaaagatgccagtgcagcataaatgcataatgccacagactcctcatccatgcactgcagatagatttaacagagttggaaggtgatagttctgtacaatattatgcagctgactaaagaatcttatgttgtccttccaatccttgtgtgaattcttgttattgtgtgtataagtgtgtaacagtgtacagttgtgtgtgaaaaatcgaaggatacgttttcagaaaggcgcgcatgtgtcctcttagcatatataactaatcaaagaatgaaagaatgtgatatttc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0106200, RefSeq:Os03g0106200