Os03g0106500

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Revision as of 12:14, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0106500| Description = Beta-expansin precursor (Beta-expansin 1)| Version = NM_001055221.2 GI:297600197 GeneID:4331323| Length = 1213 bp| ...")
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Gene Name

Os03g0106500

Description

Beta-expansin precursor (Beta-expansin 1)

Version

NM_001055221.2 GI:297600197 GeneID:4331323

Length

1213 bp

Definition

Oryza sativa Japonica Group Os03g0106500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:365234..366446

Sequence Coding Region

365255..366058

Expression

GEO Profiles:Os03g0106500

Genome Context

<gbrowseImage1> name=NC_008396:365234..366446 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:365234..366446 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcatcctcctcccttctactcgcctgtgttgtggtggcggctatggtgtccgccgtctcctgcgggccacccaaggtgccaccgggccccaacatcacgacaagctacggcgacaagtggctggaagccaaggccacctggtatggtgcgcccaagggtgctggccccaaggacaacggcggcgcctgcgggtacaaggatgtcgacaaggctcccttcctcggcatgaactcctgcggcaacgaccccatcttcaaggacggcaagggctgcggctcatgcttcgagatcaagtgctccaagccggaggcctgctccgacaagcccgcccttatccacgtcaccgacatgaacgacgagcccatcgctgcctaccactttgacctctccggccttgccttcggcgccatggctaaggatggcaaggacgaagagctccgtaaggccggcatcatcgacacgcagttccgccgcgtcaagtgcaagtatcctgccgacaccaagatcaccttccacatcgagaaggcctccaaccccaactaccttgcgctgctagtcaagtacgtcgctggtgatggtgacgtcgtggaggtggaaatcaaggagaagggctccgaggagtggaaggcgctcaaggagtcatggggtgccatttggaggatagacacccccaagccgctcaagggccccttctccgtccgcgtcaccaccgagggtggcgagaagatcatcgccgaggacgccatccctgatggctggaaggccgacagcgtgtacaagtccaacgtccaggccaagtga</cdnaseq>

Protein Sequence

<aaseq>MASSSLLLACVVVAAMVSAVSCGPPKVPPGPNITTSYGDKWLEA KATWYGAPKGAGPKDNGGACGYKDVDKAPFLGMNSCGNDPIFKDGKGCGSCFEIKCSK PEACSDKPALIHVTDMNDEPIAAYHFDLSGLAFGAMAKDGKDEELRKAGIIDTQFRRV KCKYPADTKITFHIEKASNPNYLALLVKYVAGDGDVVEVEIKEKGSEEWKALKESWGA IWRIDTPKPLKGPFSVRVTTEGGEKIIAEDAIPDGWKADSVYKSNVQAK</aaseq>

Gene Sequence

<dnaseqindica>22..825#caataacattatattgcagcaatggcatcctcctcccttctactcgcctgtgttgtggtggcggctatggtgtccgccgtctcctgcgggccacccaaggtgccaccgggccccaacatcacgacaagctacggcgacaagtggctggaagccaaggccacctggtatggtgcgcccaagggtgctggccccaaggacaacggcggcgcctgcgggtacaaggatgtcgacaaggctcccttcctcggcatgaactcctgcggcaacgaccccatcttcaaggacggcaagggctgcggctcatgcttcgagatcaagtgctccaagccggaggcctgctccgacaagcccgcccttatccacgtcaccgacatgaacgacgagcccatcgctgcctaccactttgacctctccggccttgccttcggcgccatggctaaggatggcaaggacgaagagctccgtaaggccggcatcatcgacacgcagttccgccgcgtcaagtgcaagtatcctgccgacaccaagatcaccttccacatcgagaaggcctccaaccccaactaccttgcgctgctagtcaagtacgtcgctggtgatggtgacgtcgtggaggtggaaatcaaggagaagggctccgaggagtggaaggcgctcaaggagtcatggggtgccatttggaggatagacacccccaagccgctcaagggccccttctccgtccgcgtcaccaccgagggtggcgagaagatcatcgccgaggacgccatccctgatggctggaaggccgacagcgtgtacaagtccaacgtccaggccaagtgagcattttaagcaaggaagaaaccagcgtacgtacgatccggcgcggctgcctatatatatatatatatatatatatatatatatatattatatactatatatgtgttgctgcatgcttgcatgcatgcacatatatatccagagaaatattttttaaacgaaataatctataaatttctgagctaggattgtggagcatatacacgccagcactataatggcgtctgctctcccatcgaactggccctgtgacaatggggtcatttgtttttgcccacaatattttctgctaaattcattctctgattttgcgtgagattatcatgagaagcagtaaccatgttgtgtatccttttcttcacgtcaaattgcactgcgctatttattt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0106500, RefSeq:Os03g0106500