Os03g0107000

From RiceWiki
Revision as of 12:14, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0107000| Description = Conserved hypothetical protein| Version = NM_001055225.2 GI:297600200 GeneID:4331327| Length = 4394 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0107000

Description

Conserved hypothetical protein

Version

NM_001055225.2 GI:297600200 GeneID:4331327

Length

4394 bp

Definition

Oryza sativa Japonica Group Os03g0107000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:384057..388450

Sequence Coding Region

384446..384462,384651..384772,385146..385303,385381..385500

Expression

GEO Profiles:Os03g0107000

Genome Context

<gbrowseImage1> name=NC_008396:384057..388450 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:384057..388450 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aggtttatccattttataggttctggaggtgggaaagcttctaagaataagaaaaagaacaagagaagaaaggaccattctaagaaccccccaaaagctaatcctgaacctgtaaacaaggaggaagctactcgtggagttccattcaatgcgggtactggtaatatttctagaacaccttgccaaagctcagatgtgcaagatgatgttgagtacccctttgaagatgctgaccttgatgatggacttgatcctgcaatgcaggaagagcttgacagagaagtggaggacttcgcaaggaggttgaattctgtttggcctgaaagaatgcatttaggccaagaaagaaggattgagtcacatatgattggtggcaatggttctctgcaaagattttctgggttcaatcacaggtga</cdnaseq>

Protein Sequence

<aaseq>RFIHFIGSGGGKASKNKKKNKRRKDHSKNPPKANPEPVNKEEAT RGVPFNAGTGNISRTPCQSSDVQDDVEYPFEDADLDDGLDPAMQEELDREVEDFARRL NSVWPERMHLGQERRIESHMIGGNGSLQRFSGFNHR</aaseq>

Gene Sequence

<dnaseqindica>3989..4005#3679..3800#3148..3305#2951..3070#gcttcgcttcccccaaaccgcaggcgcacccccaccaaccaaaaaaccacaacctccccctctcctctcctctcctcgccgccggcgccgccgccgccgccgtcaccgccgccttctccctctccagcctctccttctctccgccacgaggtacgcccccgcccccgcgcccgcgcccgcgcccaatcctttccttcgtttgcgttcgtgcgtagggtcggttcccgggttagggttttggccggggcgacagccgacaccgtcgccgtcgagtgggcttcgtggattgcttgcttttgcgacacgccttccgtttgcctccctccgcggcgccaatcctcgtttagggtttaaccccatttcgctgctccggtggttgcgattcacgtctttcttaccttgtctcttgccggggaatggataagtttcttgccgtagccgcggccttgttaggttgtatagctatgtgttttacgaggaccaaatggaggccattttttgccgattagacagggggaacgtgtcgccggatgcaaattgctgtatctttgattacctagtttccatttcattgctttgattacacatgcatatctgatttcatatttggttgctggatgcccatgcatgttcggtaccaggattaagtgcatagactagtgccttctcctctgcatttatgaggattaattctttcaatgaactcaacctgtggacctcaaatatggatcagttagtcataccgccaaatggtacccagcgtgaatctgtttgtacctattgggtcgaggtgtctatgtagtgtaaccagaattaacctaggaacctatcggtacttttgaaagggcaatagtgagctttatgtcatttggtgatgccatttagttgctactaccttgagagtacaactgtagaaaggctgcatattttatttctctatttgaagctggatgctctatctttcttctttttttttttaaaaaaaagttttgcttcatgtgtcatattgcatttctatgtgactatttaccccctgtgtactccaaaatgccataacttatgcatctcgggtttctctctgtactgtaggctaaacaagatcattcattccattagtcataaataaagaccattgttgaatcaaaagagaaataaggtcactatccaattgaagaccaaaaacagggtactgtgatttgttgtacaggataaaagtttgtcgacataatttccggccattggagtactggcaggtgttataccccgaaaggagtttcttgtaaattttctggtgtattgtattggcggctttgttgtttctctggaattggcaataatgtcagaaagtgagttggcagtaataaagccagaggtatgacccctatgcatttctagatcataactattttttctgtttattggaggggaaacaattgttctccagccttatcagctattcatttggttccaatttaatttcattgtgaactcacaggcgttgaagagttatatttggcttcagtgctttgatggttccatacaacaagtggaggaggaggttgccatgttttgccctatgatatgtcgagagatagtaaaaaatggaacaggatcatcaaaaaatcatgcaattgctctcccagaaagagttaaccctacaagtttgagtttgattcttgactattgtcggtttcatcaagtcccagggcgctcaaacaaggtatgtcgtgatttaagttttgtcttctggcaactccctttttactgctttctctcttctgcttgtttcaggcgtccacctgttgcaagtatagaccattatgtaattttgcttcctgtaacagccatgttattcccgtagttgttttgttacaagtaatagtctcaagggtaattctgcttcttttaatactcctatttttatcgataaggatcatggcatgattcagcttatgaacttcgggaaactttctggagaggatgctaattcttttagccacttaggcatttactttatgttataagaggaaataatcatttgatgaatttacatttctccagttatcatatcatggtcacatttattgtgcaggagcgaaaatcatttgatgaaaagtttgtcagaatagatacagaaagactatgtgagctgacatcggcggctgatagtctccaattaaagccattggttgatcttaccagtcgagcacttgctcgaataattgaaggaaagacacctgaggaaattcgtgatattttccatttgccagatgacttaacagaggtacaaatcgcatgtctgcttatagttatcagcatgtattgatgcttactgtggaacttgcattcattcaggaagagaaattggaacccctgaaaaatataaatgatgatcccaggatccgtttgttgaatcgattatatgcaaagaagcggaaagaactacaggagcgccagaaactgaaggtaaatatgataaaatccaaactgttgtattatcatcagagtatgctttctgatattaggcctgtaggccatgtgaaatgatatttatcctgtccattcagcagtgtagttcatgtttgaatgtcatgtattaagaatcttatgctaattttgtttcaggatgttcaagtacaagaagagcaaaaagatgagcggtcactggatgagatactatgttttataaatggggatggaggtataattacagtgagttatattgactatataacttcgttgtttcccttgtctcattcaaccatgattatcctgttctgctgaataacgctgagcaatcagtaaactactaagttgtcatccagggtcaaattctatagtcgattttaactaatctggttacaatatttaggcaaagatgcaaacatgcaaccaaagagcttgctcaaagagtatttctatatagaaaaaacttagcaatttcatataaaggtttatccattttataggttctggaggtgggaaagcttctaagaataagaaaaagaacaagagaagaaaggaccattctaagaaccccccaaaagctaatcctgaacctgtaaacaaggttaggtgtcctcactgttttttgttgagtagttgtgtggagaacagtcaagttcttacttatctgttgacttataggaggaagctactcgtggagttccattcaatgcgggtactggtaatatttctagaacaccttgccaaagctcagatgtgcaagatgatgttgagtacccctttgaagatgctgaccttgatgatggacttgatcctgcaatgcaggaagagcttgacaggtgaggatatgacatctcaagcattcagttctgttttttctgcgccgttcttttctttccaatgcatcaaaactctatagcgccctattttgcatatgctattatgctttagcaaattacatgttttgcccctaaaaacaattcttcttagtatttgtgctgatatataagttggttagttcaaaattcacagctgaaaaacagcatgatataattcagttgcttctggtcaagttcatagaagttttgcttaataatcgcagttgcatctggtcaagttcattgctctcctaagcctgttgagaaagttgcagagagtattcaacatcatttactactgacatacctgacaagttttacttttaacatgcagagaagtggaggacttcgcaaggaggttgaattctgtttggcctgaaagaatgcatttaggccaagaaagaaggattgagtcacatatgattggtggcaatggttctctgcaaagattttctggtaattacttctatattttgaagaaattttgtattccccagtccaagtgtcaaagaatatgatcttatgtctttaggcaagcatcaaagatgcacgatagcggttctgcgcagttttttttttttttgggcgtaagcactcttgtttagccatacttatcttgtttaatcgtacttgcatttatgcagggttcaatcacaggtgagaaggttaagcgccaggatcaacaagcagaagcacaggaaatttgtgcacatgcagcttggaagagagctagagaccaccgaacagggccacctgtttacttgagtaagtgctcgccgaaaaagcctcggcgcccagcttgcagacgatgtagatttgtttgccttggccattttcggtgaagggggggggggggggggatgatgaggtatagatcaaggaacagtgaagtaagtttgttatttcattggagcgttggaggtctgttgactcgggttttttctttgctgtgttgccaattttcctgaatagagcgagtgtgttgatgatagttgcaactgactgtaacagatgatgatatgagctgttgtgaaagaaattccgttgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0107000, RefSeq:Os03g0107000