Os03g0107100

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Revision as of 12:14, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0107100| Description = ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter family protein| Version = NM_001186300.1 GI:297721730 GeneID:926...")
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Gene Name

Os03g0107100

Description

ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter family protein

Version

NM_001186300.1 GI:297721730 GeneID:9267906

Length

3470 bp

Definition

Oryza sativa Japonica Group Os03g0107100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:390148..393617

Sequence Coding Region

390148..390264,390859..390900,391682..392740,392834..393001,393093..393197
,393531..393617

Expression

GEO Profiles:Os03g0107100

Genome Context

<gbrowseImage1> name=NC_008396:390148..393617 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:390148..393617 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgcgcgctgtgtttggcaggagacggtggaggaggaggaggtgctgcggcggctcggcacgggggagaaaggaggcggcgcgacgcctccgcctgcacgggcccaaccccaacgtgtccctctataaacacacacacgctacttggcttgctcttgaggacagcatgcttcgaaaattcctgatgaagctcttctcactctgggaatggaacaatatcttccccaagtacaggaacatgatctgtgtcatacttaactccatgtcatgggttacagtatcatctacagttgtgtccctcaccattgcttcagctggccagagatcttccatgatgtccatcgctatatatttactagctacaagcttgacagcatgcttgactgtgaaacttgttgtggagtatgctaaggctccattggaggcaaaagcatatgcaccaagggcgaaggttctgagggatgggatgtggataaatgtgcatgcagtgaatctggtacctggggatatcatatttctcaaagttggggacattgtccctgccaatgcccgtgtcctccggtttgaaaaaatcaacacaatgacttgctgggccaaaaggtctgttgattgtgtacacggcttcctcatatactatgcttggaccgtgtcctgtggccaagggactgctgttgttattgcgactggtcgtgatattcctcgaagcacacttcggctctacccgcaacgttacactcggcctgggcaacttaaagagggaatcatgcttgttggctgcttctgcttttctcttgtgctatttggtaccattgcggaggtaatcttaagattgttgttccagaaacacagctctggagctatgctgcagggtggctgttttatggcattaattggggtggttccaatggcaatgcctgttgtcctctaccttgcattggcatttggatctctaaggctttgtttgctgggggttgctagtagagggacagttgcccttgaagatctggcaagcatggatgtcatgctttttaacatgacgggcaccataaaatgtaataaaccctcttttgccagggacaagattgagttgtttgcgaaaggtgttaatgaagatcaggctattgtgttagcttcacgggcatcaagatcccaacatgaattgtacattgaaccaattgatccagctattctgagcctcttggatgatccagaacaggcaagggctggtgttcaggtcatagagcaccatgcccatttctttgtttcactaaagttgatgttcctggctacatatattgatgaaaatggttctaagtgctgtgtattcaaaggtgatcctgcaaatgcaagtcacttatacaatattcacacaacagagaagcgtgttgctcatcagtgcggctgtagcaaagcagtcaaagagagaattagtatgataatggataaccttgctgttgatgggtatcaggccatagctgtaggacatcaggtgatcggggtcgatcttggtcaacggcggatcgggactagactcagggaggagttgaggtccaaagcgatcaaggatgccgggtga</cdnaseq>

Protein Sequence

<aaseq>MMRAVFGRRRWRRRRCCGGSARGRKEAARRLRLHGPNPNVSLYK HTHATWLALEDSMLRKFLMKLFSLWEWNNIFPKYRNMICVILNSMSWVTVSSTVVSLT IASAGQRSSMMSIAIYLLATSLTACLTVKLVVEYAKAPLEAKAYAPRAKVLRDGMWIN VHAVNLVPGDIIFLKVGDIVPANARVLRFEKINTMTCWAKRSVDCVHGFLIYYAWTVS CGQGTAVVIATGRDIPRSTLRLYPQRYTRPGQLKEGIMLVGCFCFSLVLFGTIAEVIL RLLFQKHSSGAMLQGGCFMALIGVVPMAMPVVLYLALAFGSLRLCLLGVASRGTVALE DLASMDVMLFNMTGTIKCNKPSFARDKIELFAKGVNEDQAIVLASRASRSQHELYIEP IDPAILSLLDDPEQARAGVQVIEHHAHFFVSLKLMFLATYIDENGSKCCVFKGDPANA SHLYNIHTTEKRVAHQCGCSKAVKERISMIMDNLAVDGYQAIAVGHQVIGVDLGQRRI GTRLREELRSKAIKDAG</aaseq>

Gene Sequence

<dnaseqindica>1..117#712..753#1535..2593#2687..2854#2946..3050#3384..3470#atgatgcgcgctgtgtttggcaggagacggtggaggaggaggaggtgctgcggcggctcggcacgggggagaaaggaggcggcgcgacgcctccgcctgcacgggcccaaccccaacgtcgtcatcctctcccaccaccaagtgcctccctccccctgttgataactgattcagtgctccggtatctgctaggaaggagtagttgtttcactctatccacattgttgaatactctcaatgaatgaatattgttggcgcaggccgctcttgtgcggattgttgtcttggcatttttgttttattttataaattttggaatcaaattggtcgcgctgctctttttgtttctgcattctggattatctgaatggagtctctacactgtacaccacacttcagcattattcagtaactgcgcgcgcgcgcgcacgcgcgcgcacacacacacacatacatacatacatacatacatacatacatacatacatacatacatatatatatatatatatatatatatatatatatatatatatataaacacacaaagctgcctccaatgcaaaagggacagtgtcatttccctgctacaaatgtcctaatttccctttggtgtgatttttgttgaaaacacttgtgtcgcaacagtggattcatcaaaatgtctgcgatgcctgttaactctacttaatttcttttctataaaagcaggtgtccctctataaacacacacacgctacttggcttgctcttgtaaatgcaactgcttgttctctcctgtgtaaaatgacaattggcaaatagcaattactcatgcttcttgacaacttggggtagtaccaccgtagaactagaaaataaactacactgaggattagcctcatgtgaaaatatcttacaattattgctgcagctcaaagagtgtctgagagattccctcttggatagtactactacagggctcatgcctcccccctcattgtgttcaaagcaacggttttctattatttcttctggacatgagacacagatatgagcaatatgagcacagatttggattttactagtgctagtttttttttaatatgtgacgccgttcactttagcgtgacatttgactgttcatcttattcaaaaaaaaaatatatatatgtcatatattttgttgtgacttgttttatcatcagagaaactctaaccttaacttatattttgacatatttgcactaaatttttgaataaaacgaatggtcaaacgttatgtgaaaagtcaatgctgtcatacatgaaaaaacagaggtagtactagtttttttaatgtactgttcatttattaaaataattcttcccaatgtgtgagtttcaatgttcacctgttttaatttttacagttggtttctagtaaaaaaaaattacactatcttgattatctaggtcccatataccgattacttttctaactaaaattgatctgtgtaagatcattttatttaaataaaatagcttcataaggtcaaatttatggttgctgcaggaggacagcatgcttcgaaaattcctgatgaagctcttctcactctgggaatggaacaatatcttccccaagtacaggaacatgatctgtgtcatacttaactccatgtcatgggttacagtatcatctacagttgtgtccctcaccattgcttcagctggccagagatcttccatgatgtccatcgctatatatttactagctacaagcttgacagcatgcttgactgtgaaacttgttgtggagtatgctaaggctccattggaggcaaaagcatatgcaccaagggcgaaggttctgagggatgggatgtggataaatgtgcatgcagtgaatctggtacctggggatatcatatttctcaaagttggggacattgtccctgccaatgcccgtgtcctccggtttgaaaaaatcaacacaatgacttgctgggccaaaaggtctgttgattgtgtacacggcttcctcatatactatgcttggaccgtgtcctgtggccaagggactgctgttgttattgcgactggtcgtgatattcctcgaagcacacttcggctctacccgcaacgttacactcggcctgggcaacttaaagagggaatcatgcttgttggctgcttctgcttttctcttgtgctatttggtaccattgcggaggtaatcttaagattgttgttccagaaacacagctctggagctatgctgcagggtggctgttttatggcattaattggggtggttccaatggcaatgcctgttgtcctctaccttgcattggcatttggatctctaaggctttgtttgctgggggttgctagtagagggacagttgcccttgaagatctggcaagcatggatgtcatgctttttaacatgacgggcaccataaaatgtaataaaccctcttttgccagggacaagattgagttgtttgcgaaaggtgttaatgaagatcaggctattgtgttagcttcacgggcatcaagatcccaacatgaattgtacattgaaccaattgatccagctattctgagcctcttggatgatccagaacaggttccctttatcttactatgttgccttttaatccctctctttgtgtatgcgtgtgtgttataaattaacttaacaagcatatcatatctataggcaagggctggtgttcaggtcatagagcaccatgcccatttctttgtttcactaaagttgatgttcctggctacatatattgatgaaaatggttctaagtgctgtgtattcaaaggtgatcctgcaaatgcaagtcacttatacaatattcacacaacagagaagcgtgtgagtcctgtcattgtggctaatgggacaattgcatgtgttgtgttagtacaggcatgttcgttagtagtcttctgtttttatgctataggttgctcatcagtgcggctgtagcaaagcagtcaaagagagaattagtatgataatggataaccttgctgttgatgggtatcaggccatagctgtaggacatcaggtaggcaatttgactctgtattaacaccttgaaacttgcaaacttataatgtatgccacaatttacatttaatttctgttattttcctccagtcagactcatgttgggaatttgctggcctactacctttcaaagaggaccttagacatgatagcgcagatgctctcaatggccttatcagtctgggttttgtgaaaccatgtgtggttatagttcttttgtgatgggaaattgacaagtaccggatgtgcaagaagtgtgtgtgtggactaacgttggtcaggttgcgacatctgtgccaagacaacggttgtttggttcatgtgtgtgcaggtgatcggggtcgatcttggtcaacggcggatcgggactagactcagggaggagttgaggtccaaagcgatcaaggatgccgggtga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0107100, RefSeq:Os03g0107100