Os03g0108400

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Revision as of 12:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0108400| Description = Snf7 family protein| Version = NM_001055235.2 GI:297600211 GeneID:4331337| Length = 1910 bp| Definition = Oryza sat...")
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Gene Name

Os03g0108400

Description

Snf7 family protein

Version

NM_001055235.2 GI:297600211 GeneID:4331337

Length

1910 bp

Definition

Oryza sativa Japonica Group Os03g0108400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:476100..478009

Sequence Coding Region

476174..476285,476375..476451,476534..476636,477091..477230

Expression

GEO Profiles:Os03g0108400

Genome Context

<gbrowseImage1> name=NC_008396:476100..478009 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:476100..478009 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggcggtgaagagcctcctcaagcccaagccgacgccgcagcagcagcttcgcgagtggcagcgccgcctccgcaacgagggccgcaacatcgatcgccagatccgagatgtgcagagggaggagaagaaggtggagaagtccatcagggaggccgccaagcgcaacgacatcggatcggccaaggcgctggccaaggaggtggtgaggtccaggaaggcggtcaaccgcctctacgagaacaaggcccagctcaactccatctccatgcaccttggcgagatcgtagctactgccaggactgttggccatttatccaagagtactgaggtgatgaaacttgtcaataaccttatgaaagcaccagaggtggctgccaccatgcaggaattcagcaaagagatgaccaaggtatggattatgaaatga</cdnaseq>

Protein Sequence

<aaseq>MEAVKSLLKPKPTPQQQLREWQRRLRNEGRNIDRQIRDVQREEK KVEKSIREAAKRNDIGSAKALAKEVVRSRKAVNRLYENKAQLNSISMHLGEIVATART VGHLSKSTEVMKLVNNLMKAPEVAATMQEFSKEMTKVWIMK</aaseq>

Gene Sequence

<dnaseqindica>75..186#276..352#435..537#992..1131#gtgcgtcttccccacgcagtcgtctgctgcttccgaattccgatcggagagcagctggactccggtgagggatcatggaggcggtgaagagcctcctcaagcccaagccgacgccgcagcagcagcttcgcgagtggcagcgccgcctccgcaacgagggccgcaacatcgatcgccagatccgaggttggggtttcattcttccattctctcttggatctatctgcccttccatacagcgatgatgctgatggttgaatccggagctagcgcagatgtgcagagggaggagaagaaggtggagaagtccatcagggaggccgccaagcgcaacgacatcggatcggccaaggtacccctacgcttccatccattcgattcgattccacttgtttgcggtttgctgatgcgcattcgtgttgggttttggtcaggcgctggccaaggaggtggtgaggtccaggaaggcggtcaaccgcctctacgagaacaaggcccagctcaactccatctccatgcaccttggcgagatcgtaggtaacgaatcacctctcatatattatatctcctcacacacacccatcgtccttatgcccaactgtttgagaatccaatcccccattttgcaatgcgcttgctgaaaattagcataccagcaaagcccttgttgatataagttaggagaatattactaatacaacggttaagctatatcttgttgctgtaggctctagtgaaccaatatcagtttgggttgtgattggaagcaggaattccactgagatttggatttttttttcttcttttcagtttgcaggaaagaatacaatcatatgagcatatttaggagtacatgttacaaaaacatatgtgcatattatatttctccccctcatattacattttgtagagtatcatttgtaagtgtattcctttcatcttccagactgatgtttgtacttacaataaattgcaacctatcacctttcagctactgccaggactgttggccatttatccaagagtactgaggtgatgaaacttgtcaataaccttatgaaagcaccagaggtggctgccaccatgcaggaattcagcaaagagatgaccaaggtatggattatgaaatgatcacatctcttccaaaggtttttcttgtcctgtatgcccatactagttcttacttcctgattgctgtggtgtaggctggtgtaatggaagaaatggtgaacgatgctgtggattcagcgctggacaatgaggacattgaggaggagattgaagaggaggttgacaaggtcctctctgcaattgctggggagactgcctctgagcttccagacgctgtcaggaaggaaaaggagaagatgaagcaaccttcaacaagtgaacctgcagaggtaatgtccaacgattcaacatatccttcacattttgcaattctagggattcttccatatctctgcgtgtttcaaaaataatgtactgagttctgaaataccttacccggaacttgcgccaatgtgcagagaactgctattgcggaagccgtcgatgacgatgacgatgacgagcttgaacagataagggaaaggctcgccaaagtgaggtcataaaagagtaatgatgaaaagcaatcactggtttgttttactgtattatactccacttcagaatgtatgtgtgtcatatcagaaatagaaaccccttcttgttattaacaaactgatatacctgcaacctgcattcactgatacaaaattgttcaatctcagttgcaagggtaattgtgtgccctgaaatttgtctattcgttgtgcgtacatacgggtatgttgtgacatctgttataatatcgcatatcttccagctcatatatccggctgagagcctgagacttggcagtaact</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0108400, RefSeq:Os03g0108400