Os03g0108500

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Revision as of 12:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0108500| Description = Similar to 4,4-dimethyl-sterol C4-methyl-oxidase (Fragment)| Version = NM_001055236.1 GI:115450200 GeneID:4331338| L...")
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Gene Name

Os03g0108500

Description

Similar to 4,4-dimethyl-sterol C4-methyl-oxidase (Fragment)

Version

NM_001055236.1 GI:115450200 GeneID:4331338

Length

1937 bp

Definition

Oryza sativa Japonica Group Os03g0108500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:478266..480202

Sequence Coding Region

478511..478582,478804..478836,478955..479102,479425..480074

Expression

GEO Profiles:Os03g0108500

Genome Context

<gbrowseImage1> name=NC_008396:478266..480202 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:478266..480202 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctcccgtacgcgacggcggcggaggcggaggcggcggtggggcggggcctgacgtgggcggaggcggcctggttccgctactcggcggccatcccggactactgcctctactgccacaacgtccccatcctcctcctcgtctacaccctcgcgccgctccccctcgcgctgctcgagctccgccgccacctgccgctgccgcacaagctgcagcccggcgtgcgccacccgccggccgccttcctccggtgctacgctgccaccgcgcgcgtgctgctcctcgccgtcgggccggtccagctggcgtcgttccctgcggtgagggcggtggggatacggacggggctgccgctgccgtcggcgggggagacggcggcgcaggtggcggtgtacctgctggtggaggactacctgggctactggatccaccgcctgctgcacacgccgtgggcctaccaccacatccaccgagtccaccacgagttcaccgcgcccatgggctacgccgccccgtacgcccactgggccgagatcctcatcctcggcttcccggccttcgccggcccagccatcgtgccgtgccacatgaccaccttctggctctggttcgtgcttcgccacctcgaggccatccacatccacagcgggttcaagttgccgttcgatccgaccaagtatatcccgttgtatggaggagtggagtaccatgactaccaccatttcgtgggaggacacagccagagcaacttctcttctgtcttcactttctgtgattacatctacgggactgacagaggctacagataccataaggcaagcttgtcaaagctgaaggagatggcaggaaaccacgttgagaaaggagatgaaaatggattcggcaacgggaaacaagattaa</cdnaseq>

Protein Sequence

<aaseq>MLPYATAAEAEAAVGRGLTWAEAAWFRYSAAIPDYCLYCHNVPI LLLVYTLAPLPLALLELRRHLPLPHKLQPGVRHPPAAFLRCYAATARVLLLAVGPVQL ASFPAVRAVGIRTGLPLPSAGETAAQVAVYLLVEDYLGYWIHRLLHTPWAYHHIHRVH HEFTAPMGYAAPYAHWAEILILGFPAFAGPAIVPCHMTTFWLWFVLRHLEAIHIHSGF KLPFDPTKYIPLYGGVEYHDYHHFVGGHSQSNFSSVFTFCDYIYGTDRGYRYHKASLS KLKEMAGNHVEKGDENGFGNGKQD</aaseq>

Gene Sequence

<dnaseqindica>1621..1692#1367..1399#1101..1248#129..778#aatttggcgccgtaactccaaacagcatatagcgatagagcgatatactcgtatatatatagctctcgatctcgccggctggctggccggagatcgatcctctgtgtcgtcgccggcagtagctagctatgctcccgtacgcgacggcggcggaggcggaggcggcggtggggcggggcctgacgtgggcggaggcggcctggttccgctactcggcggccatcccggactactgcctctactgccacaacgtccccatcctcctcctcgtctacaccctcgcgccgctccccctcgcgctgctcgagctccgccgccacctgccgctgccgcacaagctgcagcccggcgtgcgccacccgccggccgccttcctccggtgctacgctgccaccgcgcgcgtgctgctcctcgccgtcgggccggtccagctggcgtcgttccctgcggtgagggcggtggggatacggacggggctgccgctgccgtcggcgggggagacggcggcgcaggtggcggtgtacctgctggtggaggactacctgggctactggatccaccgcctgctgcacacgccgtgggcctaccaccacatccaccgagtccaccacgagttcaccgcgcccatgggctacgccgccccgtacgcccactgggccgagatcctcatcctcggcttcccggccttcgccggcccagccatcgtgccgtgccacatgaccaccttctggctctggttcgtgcttcgccacctcgaggccatccacatccacagcgggtgggtactcactgtaaaaacctcgtcatcgctgtatatatttctattccctccgtttcaaaatgactattaggacgtcgtgtcagatgcagcgtggatgctgcaaaaactcaagtcttccttatctcgctggaacatcattgagaaaaggggaggggggagaatagggagagaatatgtcactaaagatcgtataagaaaatatagcccatattaaattgagacatagatcgtatttatatagctaatgaacatttactagtccttagtttatagactagtagcatttagcttaattatccgaaaactctacttgaagcaggttcaagttgccgttcgatccgaccaagtatatcccgttgtatggaggagtggagtaccatgactaccaccatttcgtgggaggacacagccagagcaacttctcttctgtcttcactttctgtgattacatctacgggactgacagagtacgcactgcactagctctacgtccaactttctctgttttagcagtaactaaacccttgcaattaaacaactttattatatatagctgacatcaaagttaactcgtgttcgtttcagggctacagataccataaggcaagcttgtcaaaggtagtagctctacaagcagtttttgagctttcacatctagcttcaattaattatccgttgtctttactagatgagaatatttgttagagcttagacaaggggaaaaaacaaacgtcgtcgttatcaattttaagttacttaaacaaccaaacttgttgctatttgtcatattcctaacgctctatctctctctctttctatttgtcctccttatggaatagctgaaggagatggcaggaaaccacgttgagaaaggagatgaaaatggattcggcaacgggaaacaagattaattagagaccaactgcaattgtaggcaggttggctcatgcagcatctgaagttttctacacagccctcacacaggaaaataatctgtgtcatgcagcatataaccaaactttgaatggaaattccctgttgtcaataacaaggttttcatcatgcccctcgcttatggaactatgcttgatcctacaattaaagatggaaattccacatgagtatgacccatgactggggcatgtagcctcggtgt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0108500, RefSeq:Os03g0108500