Os03g0109300

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Revision as of 12:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0109300| Description = Similar to Lysine decarboxylase-like protein| Version = NM_001055241.1 GI:115450210 GeneID:4331344| Length = 4936 bp...")
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Gene Name

Os03g0109300

Description

Similar to Lysine decarboxylase-like protein

Version

NM_001055241.1 GI:115450210 GeneID:4331344

Length

4936 bp

Definition

Oryza sativa Japonica Group Os03g0109300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:515961..520896

Sequence Coding Region

516042..516164,517573..517670,518002..518032,519053..519152,519752..519822
,519983..520126,520543..520611

Expression

GEO Profiles:Os03g0109300

Genome Context

<gbrowseImage1> name=NC_008396:515961..520896 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:515961..520896 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggcagcagcagcagcagcagcaggagagcaggttcaagaggacctgcgtgttctgcggcagtagccagggcaacaagaccacctaccgcgatgccgccgtcgacctcgccaaagagctggtcgcgaggggcattgaccttgtgtacggcggcggcagcattggcctcatgggcctcgtctcccaggccgtctacgacggtggcagacatgtcattggggtcatccccaagactctcatgacccccgagataatcggagagacagtaggggaggtgaggccagtgtccgacatgcaccagaggaaggctgagatggcgaggcagtctgatgcattcatagccctgcccggaggatacggaacactggaagagctgcttgaagtcatcacatgggcgcaattaggcatccatcataaaccggttgggctgctgaacgttgatgggtactacaactccctgctcacattcatcgaccaagccgtggaagaaggcttcatcagccccagtgctcgccgcatcatcgtgtcggctccaacggcacaagaactcatggacaagcttgaggaatacgtcccttaccatgatagggttgcgtctgggctgaactgggagactggtcatctagggttctaa</cdnaseq>

Protein Sequence

<aaseq>MRQQQQQQQESRFKRTCVFCGSSQGNKTTYRDAAVDLAKELVAR GIDLVYGGGSIGLMGLVSQAVYDGGRHVIGVIPKTLMTPEIIGETVGEVRPVSDMHQR KAEMARQSDAFIALPGGYGTLEELLEVITWAQLGIHHKPVGLLNVDGYYNSLLTFIDQ AVEEGFISPSARRIIVSAPTAQELMDKLEEYVPYHDRVASGLNWETGHLGF</aaseq>

Gene Sequence

<dnaseqindica>82..204#1613..1710#2042..2072#3093..3192#3792..3862#4023..4166#4583..4651#aaacacaaagagagcaaaacttaagctagctctgggtgctgcattgtctgcagtttacaaaggtagatcaattagaggagaatgaggcagcagcagcagcagcagcaggagagcaggttcaagaggacctgcgtgttctgcggcagtagccagggcaacaagaccacctaccgcgatgccgccgtcgacctcgccaaagagctggtacacaactacactctctcatagcatgcatctatgtttaacagcatatcatgaatctctctctttagttttgtttagattgcggttcctttccataattacacctcaaagcaggaagcaaaggtttataattaattaatataggcgtggatctttaataaattgtgatcatatatatgcgctggcaaaacaggctatctttcacctgcatatatataatcacaatatatattgtgttatcaaaatcaaaattaaagatccacgcctgtgtagaggccgaattttatctattcattgtctaaaaagatactctccgtttcaggttataagatgttttgactttgatcaaagtcaaattgtttcaagtttgactaaagttatagacaaatatagtaatatttataatactaaattagtttcatcaaatcaataattgaatatatttttataacaaatttatcttggattgaaaatgttactactttttttatacaaacttgatcaaacttaatgcaattttactttgaccaaagtcaaaacgtcttataaccttaaacggagggagtatattgtactagttaactacaaactatcggttaccacttactaacggatactgtaacgggaacagctcaacatatcaacaaagttttaagagttggtaaaacttattcggtttcatccgtttttattcggttactgccaggtagtggtaaccccatccatattggataaggaaacctgcttccaatagatcgacacgataccctcgtccccttttctattcaattggactacatggctgctttacatccatcatcacttttttttttgaaaactactctatctgtcccataatataagaaattttaaagggatttgacatattcacaatggatctagataggctctatgtctagatttaccgtactagaatatgtcacaccctttcaaaatctcttatattataggacgggggagaagtatgcactactaatcaagagactatattgtggcaacgtgttcgaacaatatccagttcggtggtacagtaagaaacactacaatggtactggttgtattcgacagtgaaattcagacgtttatagtatttcgcgtgcctccctttgttttttttccttcatcgaaagaaaaaggaaacagagggacaggtctacgttctgttctgcaaaggagtactagtacgtatcaagacaagtacagcagcatgtacagagattttgtcatgtcagaaaatggcaacgcccatgcgttcctctgcatctcctgtctgcatgtgtatccccaagttttatgggaacaggagaacgctgccccattgttgcctctgcaacgaatttgctgctgcactgcacgatgatgatgaggagttgttgtttccgtgcaggtcgcgaggggcattgaccttgtgtacggcggcggcagcattggcctcatgggcctcgtctcccaggccgtctacgacggtggcagacatgtcattgggtacacactctcttcttcttcttcctctttccatctttaatttccctggcctctgaatttcaatccaccacgacagtcaagcttcaggttctatgttaaaggccactgatgttattgcgtcatgccatagcttctatgttaaaatactctacgcatgatattttgtcagtttagcttaggattgatgcacagttaattaattaagtctgattgaagagtatttttattatattactccctagtacgtccattaatattgatgcaagtatatgccagtacaaggaagtgctcactctgttgtttcatgctcttgtcttccatgcgcgtgcagggtcatccccaagactctcatgacccccgaggtatgaattgcacatctcccctactgctattctacttcacaagtgaaattattactgtaaattactatcatatactagttttagcaccaatcaccaccagtatatgctccttttaagtttcaatcatggcaatgcactgacacttgatagttttcaattgtgttactactaggccccagggctagttgacactctatcagatatatagcagtaatccttgagcacttgaatcgatcgagtgtctcctgggaaacagaacaggcactgcttagaaactgaaaacaacagtttaatctaatcacctggatgggatggagtatagtcgtacttttgtagtcgattgcgcgcctgcggcacaaatccaaacccgggcgtgagtataaactagaggagcactgcagctttgcagatgattcctcaaagacatgcttcccttggaagtcgaggcaacgtttgcctgtctctatagccttctcctcaaaagaatgttcttgtttgctactcctactacaactccatccatgaagttttagaagcaggaatgcaggcatgaggcatcctagatgaccttgattgatgaagcagagggcattgatctctgcagctacctgcatcagcccatcatgtattacttgatggctcatgcaacagctcaatcctgcttgcacatggttgttgcattgcagtaatttctcattgcacttgctcacagccatatgtactgtgaatctgtaatagagtacagtactgtttttccttcttgccacgtgcatgataggagtaatgtcaacggtaattaattggcatcaatgtgtacttccctggctcagcagtgtggtacgactaggagtttttgcctcagaatggtttagagacaatgcatgatgcatcatatatagtcatagcattgtaatatacttttagccacctgcaaaaatagttttagtagtagtgaattaaccagtaatctttaagtaatactgaaggggatatatggatgtatgttgttgttatctgcagataatcggagagacagtaggggaggtgaggccagtgtccgacatgcaccagaggaaggctgagatggcgaggcagtctgatgcattcatagccctgcccggtgagcgctgcatagccctgcatttcataactgtgcattgcattccatttctcaattttgtcaggtcaaggcgccagcaagatctccacggctagtactgcctcttaagagcaaggttaatagtagttgtaggcagccggcgttaattccatccaactcagctagtaactctttttgcaccttgtgaatacaataagtgacctgcaacgctgggcccatcaacttcacatcataataaaataacttaagcttcctctcacacatgcagctcacaacctttgcgctcaccacttttcaccatttttctctcgaagctggtgctagagccagcgataaaattgtcgcccactctcactctctctcctcttctcactcatccagctcaacactgtagctgacgtgtttctcctatcgccagtccagcttgtactgttgtactcgctctaataaatcctctagtaatagtactgcgtgtgtcagacaagtaataacacgccaagtggcaacgtggcacccttgtttacttacggtattagtattactgatcttctgtcgtttagagtaccacaaactaactagaatgtatcgaaacaattcaggaggatacggaacactggaagagctgcttgaagtcatcacatgggcgcaattaggcatccatcataaaccggtataattcagtgcattaatcgctatattatggagtatataagcactcgcttctctctgaaacgaactctttacgatattatccatttcatcttaattcagtgctaatgatttctgacagagagctttattcttttcctgatgaaccatgcatctttcaggttgggctgctgaacgttgatgggtactacaactccctgctcacattcatcgaccaagccgtggaagaaggcttcatcagccccagtgctcgccgcatcatcgtgtcggctccaacggcacaagaactcatggacaagcttgaggtagtctaaattaacagctcatgcaaagtttctttttttttttaactactccctccatcgcaaaatataatgtttataagttaatggtcttcaacgtaaaactttaactgttgctttcatccatgatatattatcgacaacaacaaaattaacataatatgaaaaatacttttttttcaagaatacgcataaggattacatatctttgtattaagattgaaaaaggaaaacgcttttaaatgcaaatttagtgatataactatgcgtggcactgaacatatacagtgttttggttttattactggtcacaaatttacaaaggttgaattttcttaaaacaaggatctccatctcaattatgacttgcttttaattgctctgtgcacaactgactgtatctcaatctatttatgcaggaatacgtcccttaccatgatagggttgcgtctgggctgaactgggagactggtcatctagggttctaagctgttgcagcgagcttaattaagcttaaatgaattgaagaaaggcgaaccatcgagcagccatcaacattaagcattgcttgttaattgtgctcgatctatgtagtagtagtagcagcttgttaaccagtctagattgtcttttttttttctcctacgaagcatggagtttgtcatctcagtttgggtaagaaaaactagtagcacctaatcagccatatatcgatgttcaagatccagtaactgagaattaattgacactaaaccaagtgtcaaagattgacc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0109300, RefSeq:Os03g0109300