Os10g0177200
Please input one-sentence summary here.
Contents
Annotated Information
Function
Rice gene Oryza sativa Drought Stress Response-1 (OsDSR-1) was one of the genes identified to be responsive to drought stress in the panicle of rice at booting and heading stages by both microarray and quantitative real-time PCR analyses. OsDSR-1 encodes a putative calcium-binding protein, and its overexpression in Arabidopsis rendered transgenic plants to produce much shorter lateral roots (LRs) than wild-type (WT) plants in the medium supplemented with abscisic acid (ABA), suggesting that OsDSR-1 may act as a positive regulator during the process of ABA inhibition of LR development.[1]
Expression
The data from both microarray and qRT-PCR analysesshowed that the expression levels of OsDSR-1 (AK064016.1 accession number) were up-regulated by 60- and 5-fold in the panicle of rice at booting and heading stages, respectively, under drought stress condition relative to panicles under normal growth conditions.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Institute of Subtropical Agriculture,Chinese Academy of Sciences,Changsha, Hunan 410125, People’s Republic of China Laboratory for Agro-ecological Process in Subtropical Region,Institute of Subtropical Agriculture, CAS,Changsha, Hunan 410125,
References
[1]Xu Ming Yin; Pedro S. C. F. Rocha; Man Ling Wang; Yu Xin Zhu; Luo Ye Li; Shu Feng Song; Xinjie Xia.Rice Gene OsDSR-1 Promotes Lateral Root Development in Arabidopsis Under High-Potassium Conditions,Journal of Plant Biology,2011,54(3):180-189
Structured Information
| Gene Name |
Os10g0177200 |
|---|---|
| Description |
EF-Hand type domain containing protein |
| Version |
NM_001070778.1 GI:115481299 GeneID:4348196 |
| Length |
4409 bp |
| Definition |
Oryza sativa Japonica Group Os10g0177200, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 10:5006157..5010565 |
| Sequence Coding Region |
5006501..5006737,5006845..5006970,5007079..5007297,5007462..5007758,5010044..5010325 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008403:5006157..5010565 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008403:5006157..5010565 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgtcgggcaagatggagaacggccagcagcagcagcagcaggaggtgaggaggaggaggaacggcgaggtggtggtggacgggtcggagatcctgcagctggtggagaacaaggaggcgtttggtaagttcgtggagcagaagttcaggctgctcgacgccgacggcgacgggaggctgtcggtgagggagctccagccggccgtcgctgacatcggcgccgccatcgggttgccggcgagggggtcgtcggcgcaggccgaccacatctactctgaggttcttaacgagttcacaaaagggaagaaagaatcggtgagcaagtcagagttccagcgtgtcctctctgacatacttcttggcatggcggctggactaaagagggaccccattgtgatcttgaggattaacggtgaagatttgaatgaatttgttgagagcccaaggtacgaaccggagatggctgccatattttcgcaagttgaatcaggaaattcaaccttgcagcagtgcatgctagctgctattcgacaactgacggtcgaccacggcatgccaccggcttcagattcatgggttatggagaatatcatagaacctgcattgcaagaactccatggtgataacctggagcaacctgtcactcaagaggtcttcttccaggaattcagaaagttcttggcaatcctcacgcagcgactccaagggcaccctgtgattgtagcacataccgagaacacctttgatgggaatggtatcaagaagctgctgtcaaacaagctcgaattagataagctgttggattgtgtttggagaggcgtaccgaaagaaaaagatagaacagcgaagcagtacattcgggttgcgttcgataggatggctgactccataaatctaccaccatatggagctgttgaacaggtagatgctgtggtcgatgaggcgttcaagatggcgaaagccgaggacgggaaggcggtggatgaaacggagttcaagaaattgctcactgagatccttggggcagtgatgctgcagctagatggcaatccaatatcggtttcgaccaacagtgtactccatgagccaatgtccacttcttccaccctgctttcgccatcgccgccgtcgccaatggtgtcatcaccgagtgaatag</cdnaseq> |
| Protein Sequence |
<aaseq>MASGKMENGQQQQQQEVRRRRNGEVVVDGSEILQLVENKEAFGK FVEQKFRLLDADGDGRLSVRELQPAVADIGAAIGLPARGSSAQADHIYSEVLNEFTKG KKESVSKSEFQRVLSDILLGMAAGLKRDPIVILRINGEDLNEFVESPRYEPEMAAIFS QVESGNSTLQQCMLAAIRQLTVDHGMPPASDSWVMENIIEPALQELHGDNLEQPVTQE VFFQEFRKFLAILTQRLQGHPVIVAHTENTFDGNGIKKLLSNKLELDKLLDCVWRGVP KEKDRTAKQYIRVAFDRMADSINLPPYGAVEQVDAVVDEAFKMAKAEDGKAVDETEFK KLLTEILGAVMLQLDGNPISVSTNSVLHEPMSTSSTLLSPSPPSPMVSSPSE</aaseq> |
| Gene Sequence |
<dnaseqindica>3829..4065#3596..3721#3269..3487#2808..3104#241..522#acttcagctgcaacggagaaatcgacgcaaaaacaaaccgcagaaagaaagaaaaaaacaagaaaggcaagaaagctactggttttcagctcgatcatcttgtgattagctcacacactttttgccacctttttgcgagagactgatcgaagtatactcttcgtctaggttgtgttcacggggagcttggtgccattgctgcaagttggggaactttttgggttgtagaaaaggaagctgatggcgtcgggcaagatggagaacggccagcagcagcagcagcaggaggtgaggaggaggaggaacggcgaggtggtggtggacgggtcggagatcctgcagctggtggagaacaaggaggcgtttggtaagttcgtggagcagaagttcaggctgctcgacgccgacggcgacgggaggctgtcggtgagggagctccagccggccgtcgctgacatcggcgccgccatcgggttgccggcgagggggtcgtcggcgcaggccgaccacatctactctgaggtagtaattccttgtatatcctgatgttcatttatttctagagggaaatacatcctgatgtgtgtcagtgtgtcatgaagttgacgctacctacagctgttaactgtcttaatgtctttaccgatttggtcgatttttgtcatgttcatgttcatgtgtcacgaacgtattttagaattaagataggtttatatatatatatatttcatatttcaaaatcttttagaagatacaacagatttcttgtaattaatggtacatatactaactccgttttgctgttgattttggaaacacatactacctccgttttgcggttgattttagaaactcttgtctaagtatcaatttatctttttattttttcactaaagataaaataagcttgactcatgcattttttttcatattttcgactaatctatttgttttgtcattaaagataatataagcatgactcacgatcgtaaaatttgtcaactttttttagcatttttatttatttattaaataaataaatcttgtatgagagtacaaacaagagggaagtgtaggcgaaataaactaataaggagtgaggataaagagagctattcatctacaaattctagatgttcagtagaacattgttaatggaaatacaatggtgagaaaaaaaatagatagaaaaacttaaaaatgtttattttcatatttgtgactaatggtcgacaaaggttatgtacaaaagtcaacattacaatatatttaaaaagggagcaaacgttatatatcaaagtcattgttatcatatatctaaaaatggagggagtagtttaattataattgttaaagtttgattttctcatggcattcaaagtcagccagcgtataataaaattggttaaaaggaagcgatcaaaatgggggagagtgtttctcttttcttaaacaaggagatagcatattgtacatacgggctcattattttgattctactaaccgttgatgcttttcactaagcattactccttcagttccaaaatataagggattttgatttgataatacgcatcctagtaatacgaatgtagatagtccagattcgtagtattaggatatgtctatccaaccaaaattgtttgaattttgtgacggagggagtacattttgggcatttctatttttttaaaataatggaaaaccaaaaatactggttggatacttagaaccgacacctatgtcaattggcataggtgacgccaaattggtgtcggttgagaaaccggcacttataattaagtggtttccaaccagcatctatatggtgctctgtaatagttattatagcgttatgcctcttcaaggacacgaataatgcattaaaaaaatcagacacttcttttatgtttattttgttcagtttagtaatatgatttggctcatctggccatgacagaaacgaatatgaagttttatggtggctctaggaagcaaattaagcaattattcagaaaaaaagttataatctgacagtacaaaaaaatgatgcactagatttcatggaaaatggaaaagatgtgttttcactttacgggtttcattacagtatttagtacattacagatgaaaaggttttatggactcccataaaaaagggtttttttggacttgttctttttgaaattgtctgaagaatttcttttggaaatgaatacactcagggtgaatatagaagaaagtattttgagattttcctataattccactagagtatgagtattgctttgacctgccaaatggaagaaactggaacgtgcctaaattaaccaggaaaacgtcacattctaatgatctagccccaagacttatcagttgacagaacaagataatcttactgaaagtgactgctcttgtgtggccaaagtcatcatccttttcaaattcccatccaatttgtctagcatgttctaggtgtctacctcctgaacattctgatatcgctgtaacttatcattccggtttcttagacacatcttttcgaaagatgatgcctataacgatttcttagataaatattagttccttttgacacatgttctcttgcttactcttgacagtgacaaaaataatggtttactggattttcttccagagaggtgtctgttcatgagctctacttccattatacattgtcagtaacttgcagtaaaattttaatcacatttcctggataatcttgaaccaaaacatccgataattactgttgtctaattcatctcatggctcatggaattaacctgcaggttcttaacgagttcacaaaagggaagaaagaatcggtgagcaagtcagagttccagcgtgtcctctctgacatacttcttggcatggcggctggactaaagagggaccccattgtgatcttgaggattaacggtgaagatttgaatgaatttgttgagagcccaaggtacgaaccggagatggctgccatattttcgcaagttgaatcaggaaattcaaccttgcagcagtgcatgctagctgctattcgacaactgacggtcgaccacggcatgccaccggcttcagattcatgggtaattgccaatgaatgtgttacataattcagagcagaaaacgaaatcatttcatacagggtaacaaatataacagagtaacagttattctgttaccgagactgacaaaacagagtggagatgaggttaagagagaaattagtaaggttggctgttttttacaggttatggagaatatcatagaacctgcattgcaagaactccatggtgataacctggagcaacctgtcactcaagaggtcttcttccaggaattcagaaagttcttggcaatcctcacgcagcgactccaagggcaccctgtgattgtagcacataccgagaacacctttgatgggaatggtatcaagaagctgctgtcaaacaagctcgaattagataaggtacggtattgtttctatcctcgatgtcatcatcttcccataaaaatatactcctatatattagtgttacttcataccgatctacttatactatcttttgtgatcaagctgttggattgtgtttggagaggcgtaccgaaagaaaaagatagaacagcgaagcagtacattcgggttgcgttcgataggatggctgactccataaatctaccaccatatggagctgttgaacaggtagaatttcatttgctaccaatcatttcatcagtaattttcaggaaaaccagccaaaacacattgtatgttcagatctaaggcttatggtaagttggtaactgcaggtagatgctgtggtcgatgaggcgttcaagatggcgaaagccgaggacgggaaggcggtggatgaaacggagttcaagaaattgctcactgagatccttggggcagtgatgctgcagctagatggcaatccaatatcggtttcgaccaacagtgtactccatgagccaatgtccacttcttccaccctgctttcgccatcgccgccgtcgccaatggtgtcatcaccgagtgaatagaagcaagatggaaggaagctgatcatagaatggacagtggagaatataatttccactggtggtaacagtaactgcaatataatgctggttttcttctgatcaatgaacaaactgcagtaacttgatagttgccatgtaactggagacctggtgcaaatatgtttgtgttggtgtttgtaactacgttctaagtgtttagtgtcggaataataaggcttctaattaagccagcagttgaacaacggggaataatttatttcaagcttttgttttgggtgcagcagatgcttggaaatggcaagcttggggaccaataatggtatgataaaactatgttagtaact</dnaseqindica> |
| External Link(s) |
