Os03g0111100

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Revision as of 12:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0111100| Description = Similar to Dihydrofolate synthetase /folylpolyglutamate synthetase| Version = NM_001055256.1 GI:115450240 GeneID:4331...")
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Gene Name

Os03g0111100

Description

Similar to Dihydrofolate synthetase /folylpolyglutamate synthetase

Version

NM_001055256.1 GI:115450240 GeneID:4331360

Length

5035 bp

Definition

Oryza sativa Japonica Group Os03g0111100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:618944..623978

Sequence Coding Region

619282..619341,619644..619753,619876..620031,620239..620317,620434..620685
,620799..620963,621072..621149,621306..621352,621435..621495
,621866..621922,622305..622388,622570..622630,622917..623026
,623294..623359,623470..623597,623698..623848

Expression

GEO Profiles:Os03g0111100

Genome Context

<gbrowseImage1> name=NC_008396:618944..623978 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:618944..623978 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctcaccgccctcacctggctcagctccgccgcctcctcctcctgccttgctcctccgtccccgtccccgtccccgcccgccgcctctcctcccctcgcgccatggcctcctcctccgtctccgccgccgccgccgccgcgcaggcaggtggtgctgtggcggcagcggagtacgaggacgtgatggggcggctctcctcgctcatcacgcagaaggtgcgggcgcacagcggcaaccggggaaaccagtgggacctcatggcgcattacctccagattctggagctggaggagccgatcgcgcggatgaaggtgattcacgttgccgggaccaaaggaaagggttcaacatgcacattcacagaggcaatcctgcgatcatgtggtttcagcacagggctgttcacctcaccacatttgatggatgtcagggagcgattccggctaaatggggtggatatttccgaagaaaagtttttgaaatacttctggtggtgctggaataagctcaaggagaagactgatgatgatattcccatgccaacctacttcagattccttgcattgttagcattcaagatattctcagctgaacaggttgatgttgctgttctcgaggttggccttggagggaagtttgatgcaactaatgtggttgaagcacctgtggtttgtggaatagcttcccttggatacgaccatatggaaattcttggaaacacacttggagaaattgctggtgagaaggcagggattttcaagaagggagttccggcctacactgctccacagccagaagaggcaatgattgctctgaaacaaagggcttcagaattgggtgtttcactccaagttgcacatcctttggaaccccatcaattaaaggatcaacatcttggactgcgtggtgaacaccaatatgtaaatgctggccttgcagttgcattggctagtacatggcttgagaagcaaggacatgtggaaagaataccactgaaccgaactgacccgttaccagatcagtttattagtgggctgtcaaatgcctctttgcaaggccgagcgcagatcattacagattcacaagtaaactcaggagaggaagataaagactgttctttggttttctatttggatggggctcacagtcctgaaagtatggaaatttgtgctagatggtttagccatgtcactaaagaggataggacagtaccatcttccatggtgcagtctcagtcttgtggcaactctcaaaagattcttctattcaattgcatgtccgtgagggatcctatgaggttgcttccgcatcttctggatacatcaactcaaaatggggtccactttgagatggctctttttgtgccaaaccaatcacaatacaacaagcttggtaccaattcatcagctcctgcagagcctgagcaaattgatttgtcatggcaattgtcgcttcaaagagtgtggcagaaattacttcatggtgataaaggtatgaacaacacaaattccagtgagaacagtctggtttttgaatcacttccactggcaatggagtggctgaggacaaatgcccgacaaaaccgatcaacttcttttcaggtcctggttactggctccctgcatctcgttggtgatgtgttgagattggtcaagaaatga</cdnaseq>

Protein Sequence

<aaseq>MPHRPHLAQLRRLLLLPCSSVPVPVPARRLSSPRAMASSSVSAA AAAAQAGGAVAAAEYEDVMGRLSSLITQKVRAHSGNRGNQWDLMAHYLQILELEEPIA RMKVIHVAGTKGKGSTCTFTEAILRSCGFSTGLFTSPHLMDVRERFRLNGVDISEEKF LKYFWWCWNKLKEKTDDDIPMPTYFRFLALLAFKIFSAEQVDVAVLEVGLGGKFDATN VVEAPVVCGIASLGYDHMEILGNTLGEIAGEKAGIFKKGVPAYTAPQPEEAMIALKQR ASELGVSLQVAHPLEPHQLKDQHLGLRGEHQYVNAGLAVALASTWLEKQGHVERIPLN RTDPLPDQFISGLSNASLQGRAQIITDSQVNSGEEDKDCSLVFYLDGAHSPESMEICA RWFSHVTKEDRTVPSSMVQSQSCGNSQKILLFNCMSVRDPMRLLPHLLDTSTQNGVHF EMALFVPNQSQYNKLGTNSSAPAEPEQIDLSWQLSLQRVWQKLLHGDKGMNNTNSSEN SLVFESLPLAMEWLRTNARQNRSTSFQVLVTGSLHLVGDVLRLVKK</aaseq>

Gene Sequence

<dnaseqindica>4638..4697#4226..4335#3948..4103#3662..3740#3294..3545#3016..3180#2830..2907#2627..2673#2484..2544#2057..2113#1591..1674#1349..1409#953..1062#620..685#382..509#131..281#accagccaccacggcggcggcggcgccatcaccaacccacacccacacctactactacgacgacacaagtagtggtcgtcgaatccgcggcggcgctcgcctgagcttgcgctgcacctgcacgcggcatatgcctcaccgccctcacctggctcagctccgccgcctcctcctcctgccttgctcctccgtccccgtccccgtccccgcccgccgcctctcctcccctcgcgccatggcctcctcctccgtctccgccgccgccgccgccgcgcaggcaggtaagcaacgccacgccctgattttgtgctgctgctgctgcttcgattgatggggttggctggtggtggatactggattgagttgattcgtggggcgtaggtggtgctgtggcggcagcggagtacgaggacgtgatggggcggctctcctcgctcatcacgcagaaggtgcgggcgcacagcggcaaccggggaaaccagtgggacctcatggcgcattacctccaggtccatttcctcctccactccccacttgtcaaaatagtatattaggatggctcatggctggttgtttgatttgatcgggtggattttgttgcttgccgcggttcgcgcagattctggagctggaggagccgatcgcgcggatgaaggtgattcacgttgccgggaccaaaggaaaggtactaactcactgatgatcagctctagctagaaagctggatgttgtgtggtttccgtttgggtgaagagtgtttagagagtagcgatgcaaggtgcataaatcactaatggaacatgtctacgcagaatcttaatgcaaccaatctgcacattaatgtttacctatgcaatagtttacttctgtttggtaatgaaaccaattaatgtataataacttatcttccttatgacgtggagtttgaacaacacatgggctttatctacagggttcaacatgcacattcacagaggcaatcctgcgatcatgtggtttcagcacagggctgttcacctcaccacatttgatggatgtcagggagcgattccggctaaatgggtaaaattacttttcatttttctcctttacttatcgttgactctaatgttgaattgctaatgcttctcatttcgatactttagaataagcttctggacacacatgttctataccatatcttttatgttatttggataactatatattctgcattgtacttaaaattccggcaaataattgaatggacttgattttgcgtgcatcatatccaccatgtcttttatgttatttggataactatgtattttacttgttctgatctagctcctaattgtgagagcatcagggtggatatttccgaagaaaagtttttgaaatacttctggtggtgctggaataagctcaaggtatatgtctatctctatctctgttgtttcatatgatggcactctgtgctgggcgctagcactgatgaaaaacaacgacaaaataaatgataccaggaacctgtgcatttcctctttgtgtttttctgctgctttcgttatcaaaacttctagatgatgatgtacatgggtgtactttcaggagaagactgatgatgatattcccatgccaacctacttcagattccttgcattgttagcattcaagatattctcagctgaacaggtgagatgtttctgggttggctgctaggatgcctcgcaacaaccatgcttgttgtaaaatgtaacatcttctcccaatcttaataaaattcggccgggtcacttcttcgcttcctgcctggcaaaaaagatataacagcagacacttcctgctttttaaatttttgttttactgcttgcatctgtttgtacacataacttgttcctccattttacttgaatgacattgtaactttatagggctttaatgtactaaggtagtcgcaccaaagacttatatcacatatttccttttttgagacttggaatgtagtggaaccatttatgattttctgggtaaacattatttgatgttttactccctcttttcgtgggtcaaacaggttgatgttgctgttctcgaggttggccttggagggaagtttgatgcaactaatgtggtatgttctgttctgttgggtgcaagtgttagtttctttgtaatcgaaatccaagacaaacttgaactatatgaaaatcttgtttgccctaggctgtttgcttcttctttcttttctttgcggccgtcctttcatcccatacaaaaggtgtgatcacaaagcaaactgtactagtagtgtactagatatagtcattcgggtctaaccatatgctgatgtcttctattttaatcagagttacagtttagcttttgtttcttctgaacattaatgaattcattcagatcaagtactgcatcctgacgactcaaggcataaataattcaaaataataaatgcgtaacaggtgtataactttgcacatatgcaggttgaagcacctgtggtttgtggaatagcttcccttggatacgaccatatggaaattcttggttagtcatgaaactgacagttgatgcccctctattactaggaaaagtagtttcatgcttttgccatgtgccctgtgagcaggaaacacacttggagaaattgctggtgagaaggcagggattttcaaggtcattttaactactaccctaacaaagtcatgctacaaattaggatgaactgttatattatcacttttttcacttggactgttgccgattaaaagagaatacgtagccaacatttcttgattttgttgatttgcttgtggcgtctgatatcaacagaagggagttccggcctacactgctccacagccagaagaggcaatgattgctctgaaacaaagggcttcagaattgggtgtatgttttattttaaacttgtcccttatgttttgtaatatttgtaaacttgatagttaatacagctgaaagcatcttctaaaataagctagtctgtgccttctgaaggtttcactccaagttgcacatcctttggaaccccatcaattaaaggatcaacatcttggactgcgtggtgaacaccaatatgtaaatgctggccttgcagttgcattggctagtacatggcttgagaagcaaggacatgtggaaagaataccactgaaccgaactgtaagtctcaatcaataattgttgcttacaaaagttggtatgataatttctttctgctcttatggaatttaggacccgttatgataatttctttctgcttttatggaatttaggacccgttaccagatcagtttattagtgggctgtcaaatgcctctttgcaaggccgagcgcagatcattacagattcacaagtaaactcaggagaggaagataaagactgttctttggttttctatttggatggggctcacagtcctgaaagtatggaaatttgtgctagatggtttagccatgtcactaaagaggataggacagtaccatcttccatggtgcagtctcagtcttgtggcaactctcaaaaggcatgcctcacagtttctctagtttcatcttacttgaatggacttgattttgcatgcatcatatcattgaatctcctttccccttatatgaaaatttacctttggaccaatcacagattcttctattcaattgcatgtccgtgagggatcctatgaggttgcttccgcatcttctggatacatcaactcaaaatggtaggtaaaaattgcttgaatggaaaaatgaagtccatattcactcatctatctaatactcccactttataatgtgtactggttgtttccactaacaactagagttctgcacaaacttatttgttcactgttgatttcactttcaagtttaatttgttcctgttcttggttgaatgtttgcatttattgttgtttcatttttcccaggggtccactttgagatggctctttttgtgccaaaccaatcacaatacaacaagcttggtaccaattcatcagctcctgcagagcctgagcaaattgatttgtcatggcaattgtcgcttcaaagagtgtggcagaaattacttcatggtgataaaggttcttcttaacttgattaccaatagacattcatgtttctattggtcatatgcagttttcttgttgaaacaagttacttttagcttgaagatgatatctgaatttagaagcaaacggtgcaggtatgaacaacacaaattccagtgagaacagtctggtttttgaatcacttccactggcaatggagtggctgaggacaaatgcccgacaaaaccgatcaacttcttttcaggtaggtgcttccatcaaactataacctataacttcagaaatgttttccttttttaaatgctagtgtttcatcctaatatgtattcctgcatttataactagagtgctgtgctatagatggctactttatgttcaccatcactgtcctgtaatctgtgatatttttagttttggcatgtgatcatgtttattgaatttcctattttgcataaattcgattttttggaaacatcgtaacatgtgtgtgcgcaagctacttccgcacttggcgctgatccatttgtgtctgatacactgaattaggtcctggttactggctccctgcatctcgttggtgatgtgttgagattggtcaagaaatgatacttcttcttggaacgatatacacttagaagttcaaattgacgctgagccaatttcgcggtttacgtttgagatcccctgacggcaaccgggcggttacaggatacaacaatttcaatttcaggtgttttggattctatgctgaccaggcagcgagcatatcgcgtatactcttcttgttatgtgtttcatggctcctttttgccactaatccgtattctttacccagaaaacttcaatgcccattacaacaagtaataaattgaatacatgaataagatggtggcaatcatgaataggatacacttttctaagcttctggtgaagatgttcgattc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0111100, RefSeq:Os03g0111100