Os03g0113100

From RiceWiki
Revision as of 12:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0113100| Description = Thymidine kinase family protein| Version = NM_001055269.1 GI:115450266 GeneID:4331376| Length = 3582 bp| Definition...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0113100

Description

Thymidine kinase family protein

Version

NM_001055269.1 GI:115450266 GeneID:4331376

Length

3582 bp

Definition

Oryza sativa Japonica Group Os03g0113100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:714543..718124

Sequence Coding Region

714787..715091,715943..716087,717173..717294,717662..717920

Expression

GEO Profiles:Os03g0113100

Genome Context

<gbrowseImage1> name=NC_008396:714543..718124 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:714543..718124 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagctccatttgcgccatgagatccctcctcgccgcctccaccttcctccgctccggcgcttcccctctgctgcggcccctttcccgtcctctcccttcccgcctgaatctttcccgattcggtccggtgaggccggtctctgcggcggcggcggcggcggacaagtctcgaggcggaggcggctccgcgatggaggcccagccgtcgtatcccggtgagattcacgtcatcgtgggccccatgttcgccgggaagaccactgcccttctccgacgcgtgcaggtcgaggccggcactggcaggaacgtggcactcatcaagtctgacaaggacaataggtatggattggattctgtcgtaactcatgatggcacaaagatgccatgctgggctctacctgagctttcaagtttccaagataaattaggaacagaggcttacgataaggttgatgtcataggtattgatgaagcacagttttttgacgatcttcatgatttctgctgcaaagctgctgaccgtgatggaaaaattgttgtagtcgcagggctagatggtgactacaaaaggaacaaatttgggtcagttctggacattatacccttggctgactcggtcaccaagctcaccgcacgctgtgagttgtgcggtcgccgtgcattcttcacgctgaggaagacacgggaaactaagaccgagctcattggaggagctgatgtgtacatgcctgtatgtaggcaacactacctggatggtcagattgtcattgaggccacaaggattgtgctggatcttgaaaaatccaaggttatccatgctttcaagtga</cdnaseq>

Protein Sequence

<aaseq>MSSICAMRSLLAASTFLRSGASPLLRPLSRPLPSRLNLSRFGPV RPVSAAAAAADKSRGGGGSAMEAQPSYPGEIHVIVGPMFAGKTTALLRRVQVEAGTGR NVALIKSDKDNRYGLDSVVTHDGTKMPCWALPELSSFQDKLGTEAYDKVDVIGIDEAQ FFDDLHDFCCKAADRDGKIVVVAGLDGDYKRNKFGSVLDIIPLADSVTKLTARCELCG RRAFFTLRKTRETKTELIGGADVYMPVCRQHYLDGQIVIEATRIVLDLEKSKVIHAFK </aaseq>

Gene Sequence

<dnaseqindica>245..549#1401..1545#2631..2752#3120..3378#tcctctcctctcttctcctctcccgccgccgccgccgccgcacccgccgatctccatcctgcgagcagcggcggcgctccacctttccctccccaaatttcaaaactcgattcgaaatctgccacgctttattcccgccatctcattctcacctacccaattgtctcctcctcctcaaatttaggttgaaaaagatattcccggcgcctccccacaatcagctagctctacaaatacctcccgcatgagctccatttgcgccatgagatccctcctcgccgcctccaccttcctccgctccggcgcttcccctctgctgcggcccctttcccgtcctctcccttcccgcctgaatctttcccgattcggtccggtgaggccggtctctgcggcggcggcggcggcggacaagtctcgaggcggaggcggctccgcgatggaggcccagccgtcgtatcccggtgagattcacgtcatcgtgggccccatgttcgccgggaagaccactgcccttctccgacgcgtgcaggtcgaggccggcactggcaggtattccttcttcgctgtttcctcacaaatggtagggctacttactggctagtgacatccctcacccaaaatcttacatctaacaactctattacatgttcttatgttaaaggtgctcgttatctagtgatgtcctgatccatggtatcaatgtaaagagtacagaaaatactttaacatatagggtctgttcagattgatgccaaaattttggtaaattgacaacactgtcaagttttggtagaatagactcaatataatgttgctaaaattccatagacattaccaatatttggtaacaaactaaatgcagccacatgattgccaattttactaaactaaataatggtatgatttaaaatgacatcaatctgaacaggctcataaacaagagtctctgtgaatgttttgatgccttgttgcagatggatgtgctttgaattttgattagggtgtctgctttgtggtacaaagttttatgttaaatggagctctaacacggcatgcgtgaagaattgagggtctgtttggttgttgcctaacattgccataactcaatttgccatagatgtggcatggcaaacaaagtgtggccaacaatttgttggtcacaagtgtggcaatgtttagctagaaaatgagtatatgacatgtaggcccatgaaacaagaaagtgtggcttgccacaactgaaacaagcaaccaaacgctaagctaacaatctgtggcatgcctaacatgtggtgtggcaatgtgtggcaccaaaccaaacagccccttgaatgcctaaggaactttgtttcttgagtgggttatgcacattttgacatttttcatcccttgaaaagcaggaacgtggcactcatcaagtctgacaaggacaataggtatggattggattctgtcgtaactcatgatggcacaaagatgccatgctgggctctacctgagctttcaagtttccaagataaattaggaacagaggcttacgataaggtaatcaatattttatatttttttctttcaccaaaccgttagtataaagaattagaaagcatatgctgataagaattatgaatgctatagagacttgagtgtttaatgttgcacatggtaagtcaggtactgtagcagtatattgaaatatcatgtaatgagatttgactcatgcttgatatccctggccttcagaagaaatgtttgcacaatctgtccatctgaatcaaagcaaggacaccatcacaagttgactatacttggatatatcttagatttagcttgccctctaagtagaaaatagatgattatctgtttcattttccatgtgtgcctaacattatacgagaacattttgagaacttggcaaaaggttttgtcatgtgggttgcatgtacagctgctggcacttggcagttgccatgccccacatgcccagcacacaagctattttggctgcattttaggagcaagctgtctcccttaattagatgattttgctagatactcttgttcaatccctatttggtagccctttttcaccatggtattgttgatggcaggcttaatatcattttagaagctagaaagataaaaatcctgataatcttcacctcttttctcagccttcatctaggtctgtcttttatgcaaattgccatctttttaaatgattcagtggacacatatatgctagtatttggtatgaggatcaaactattatacgatgagtcagtcattacaatgcctcattcctcaattttctaccacgcatgtgctattcggggaaataaatgaggagtggtagcacaatccgttctaatgctcaaaccaaatgaggagttagggtaggattgtccttgactatcttgtttctcaaaccaatcatcttgctagtttgttggaagtagggattgcaatggggccctgacccctgatacctggtggggaattctcccattaggggccagtgataggtattttatttacagtacagttggatgtcatcttacatggtgtaacaaggtagtgttagagccaacataaagatgaaaatatggtagtcactgaaataactcttgcaggttgatgtcataggtattgatgaagcacagttttttgacgatcttcatgatttctgctgcaaagctgctgaccgtgatggaaaaattgttgtagtcgcagggctagatggtgactacaaaaggtacttactggatgatttatttcaaatctaaaccgagggtgagtttagatctctaccataccaaaatatggtagacaataactgtatcaaaaattccacattaccaaaattttggtaatatacacacctgttcatgtcaccgtattgcaattttggcacaaaataacacatcctttccatttacaacctatcaaaattacccaagcactagcaaagtttggtacagcatcaaacaataagctaggactaggcatgttctttatctgaatattagcactaaactcgtggtaaataggatatttggatgcaaaacccaacattttccagtgaatattgtgctagcatttgatgattgtgatactggcaggaacaaatttgggtcagttctggacattatacccttggctgactcggtcaccaagctcaccgcacgctgtgagttgtgcggtcgccgtgcattcttcacgctgaggaagacacgggaaactaagaccgagctcattggaggagctgatgtgtacatgcctgtatgtaggcaacactacctggatggtcagattgtcattgaggccacaaggattgtgctggatcttgaaaaatccaaggttatccatgctttcaagtgagtgaatagctcattgtatcctttttacttgcaaggcttaccatgtgtaacactatcatcatcaaccatgcaatccatctagttatcgtagaagatgatggaaagaccacaatattcagagactctccattaaacgattgtaaatatgtatcagtccagattctgttgggaatgaattttatcttggtttgtggatggaggaatt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0113100, RefSeq:Os03g0113100