Os03g0115100

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Revision as of 12:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0115100| Description = Mevalonate and galactokinase family protein| Version = NM_001055284.1 GI:115450296 GeneID:4331392| Length = 4762 bp|...")
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Gene Name

Os03g0115100

Description

Mevalonate and galactokinase family protein

Version

NM_001055284.1 GI:115450296 GeneID:4331392

Length

4762 bp

Definition

Oryza sativa Japonica Group Os03g0115100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:830730..835491

Sequence Coding Region

830886..831284,831513..832207,832370..833389,833572..833698,834344..834711
,834782..835061,835139..835468

Expression

GEO Profiles:Os03g0115100

Genome Context

<gbrowseImage1> name=NC_008396:830730..835491 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:830730..835491 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagccggccgagcgtcaccggcggcggcggcggagggcgcacacggcggacgaggcggcggcggtgctgcggaaggcgtggtgccggctgcggctatcggcgcgggatccgtcgcgggtgccgccgtgggacgccgtcgtcctcaccgcggccagccccgagcaggccgcgctctacgaccgccagcttgcgcgcgcccgccgcctcggccgcttcccggcctccaccgccgccctcgccgtccccgaccccgacgccgcgcgcatcggctccggcgccgccactctccacgccgtcgcctccctcgtccgccatctcatcgcccaggcttccaaggaagagatcgccgaattgctgcccgaagcaagtgattcttcagcagatgacatcccactcagctcggtggtacgattcatggcgaacaaacacgtactgctgcttcacgctgggggtgatagcaagagggttccatgggcgaaccccatggggaaggccttcctgcctctgccttacttggccggagacaatcctgatggacctgttccgctgcttttcgaccacattctcgcgatctcatccagcgcaaggcaagctttcaaaaaccaaggtgggatcttcataatgaccggggatgttctcccatgcttcgatgcttcaaacctagttcttcctgatgatgctgcttgcatcgtcaccgtgccaacaactctagatgtggctgctaatcatggtgtagttgtagcggcaaaggacggaactgatggggagaactattccctgtgtttggttgataatctcctccagaagcctacagtgcacgagcttgtggagggccaggctattcgagatgacgggagagcactgcttgacacagggataatatcagccaggggtaaagcatggcaggagcttgttagacttgcatattcatctagccatgtcatgatcaaggagctcataactggcagaaaagagatgagcttatacgaagatcttgttgctgcatgggtgccttccaggcatgaatggttaaggacccgtccatttggcatggaactaattgctgctttgggaaagcacaggatgttcagcttttgttcatatgatttctcatttttacattttggcacatccgctgaagttcttgatcacttggcgggctcatattcaggacttgtagggcgaaggcacatgtcttcgataccagagactactgcttgtgatattgcggcaacagctgtcattttgtccagtaaaatttctgctggggtctcagttggagaggattcattggtctatgattcatcactttcaggtagaattaggattggctcacaatgtattgttgttggggtgaatatacatgagttacatgggaacaggtctcagataatcagtactagctcatacttcacattacctgatcgacattgcctctgggaagtccctttggtaaactctgtggaaagagtaatggtttactgtggccttcatgataatccaaaagtatctatgaagaaagatgggacattctgtggcaaaccatggagaaatgtcttggaacatcttaaaatccaggatacagatctgtggagctcaaccaatgaagacaactgcttatggaatgcaaagctttttccagtcatgtctctacctgaaacgctgaaagtaggtatgtggcttatgggatcgacatgtgacctggatggcaaagtcgcttccctgtggaaagaatcacggaggatcagcttagaagagctgcatcgttcgattgactaccatcagctctgtgtgaattcaagcaagcatcaagcagatctagcaaccaacattgctaaagcttgcatgacctatggcttgcttgggcgcaacctgtttcaactatgtgaggaaatgctacaaaaggaaaattcatgcgtagaagtctgtaatgagttactttcgctttgtcccagtcatggggatcagtattctggtgttcttccgcagagcagaagataccaggtcaaaatggatctgcttacagcttctggagatctttccactgcagctattgttgaagataaagtgtgggcttccatagcaagtgaaactgcatcagctataaaatatggatctaaagagccatcaagcgattccaagtgttcaagtaatggtaacctgcatcctaagaaggctattgtggaattaccggtccgtgtcgactttgtcgggggttggagtgatacacctccatggagtttggagcgtccaggttgtgttttgaatatggcaatacggttggaagggaaccttccagttggtgctatgatagagacaacaatggaccaccttggagttctcattgaagatgatgctggcagaaatgtttgtattgatgacctgtcttctattacttcaccattcaaagaaaatgattcattccgtttagtcaagtctgctcttattgtgactggtgtcctaaaccatgaaagattgtcaaaattagggttgaacattaggacatgggcaaatgttcctcgtggaagtggtctgggaacttctagcatattagcagctgcggtagttaaggggctattccaacttatagaaggtgatgaaagtgatgcaactgttgctagagctgtgctggtagtagagcaagtaatgggcacaggcggtggatggcaagatcaaattggtggcctatatcctggaatcaagtgcactcagagttttccaggacagccattgcgtttgcatgttgttccattgctggcatctccgcagttgattcaagaattacaacaacgtctcctggttgtgttcactggtcaagtaaggcttgcccaccgggtcctgcagaaagttgtcactcgatatctccgccgtgatagcctgttgatatctagcatcaagaggcttgctgagttggcgaaaattggaagggaagccctgatgaatggtgaaatagacgagcttggtggcataatgtcggaggcctggaggctgcatcaggagctagatcctttttgcagcaacaagcttgtggacgaattgtttgcatttgctgacccttactgctgcggctacaagcttgttggagctggtgggggcggctttgcgttgatgcttggaaagaatcttaactctgccaaagaactcagacaagcactcgagaattctgccaccttcgatgtaaaggtgtacaactggaacgttgctatgacaccatga</cdnaseq>

Protein Sequence

<aaseq>MEPAERHRRRRRRAHTADEAAAVLRKAWCRLRLSARDPSRVPPW DAVVLTAASPEQAALYDRQLARARRLGRFPASTAALAVPDPDAARIGSGAATLHAVAS LVRHLIAQASKEEIAELLPEASDSSADDIPLSSVVRFMANKHVLLLHAGGDSKRVPWA NPMGKAFLPLPYLAGDNPDGPVPLLFDHILAISSSARQAFKNQGGIFIMTGDVLPCFD ASNLVLPDDAACIVTVPTTLDVAANHGVVVAAKDGTDGENYSLCLVDNLLQKPTVHEL VEGQAIRDDGRALLDTGIISARGKAWQELVRLAYSSSHVMIKELITGRKEMSLYEDLV AAWVPSRHEWLRTRPFGMELIAALGKHRMFSFCSYDFSFLHFGTSAEVLDHLAGSYSG LVGRRHMSSIPETTACDIAATAVILSSKISAGVSVGEDSLVYDSSLSGRIRIGSQCIV VGVNIHELHGNRSQIISTSSYFTLPDRHCLWEVPLVNSVERVMVYCGLHDNPKVSMKK DGTFCGKPWRNVLEHLKIQDTDLWSSTNEDNCLWNAKLFPVMSLPETLKVGMWLMGST CDLDGKVASLWKESRRISLEELHRSIDYHQLCVNSSKHQADLATNIAKACMTYGLLGR NLFQLCEEMLQKENSCVEVCNELLSLCPSHGDQYSGVLPQSRRYQVKMDLLTASGDLS TAAIVEDKVWASIASETASAIKYGSKEPSSDSKCSSNGNLHPKKAIVELPVRVDFVGG WSDTPPWSLERPGCVLNMAIRLEGNLPVGAMIETTMDHLGVLIEDDAGRNVCIDDLSS ITSPFKENDSFRLVKSALIVTGVLNHERLSKLGLNIRTWANVPRGSGLGTSSILAAAV VKGLFQLIEGDESDATVARAVLVVEQVMGTGGGWQDQIGGLYPGIKCTQSFPGQPLRL HVVPLLASPQLIQELQQRLLVVFTGQVRLAHRVLQKVVTRYLRRDSLLISSIKRLAEL AKIGREALMNGEIDELGGIMSEAWRLHQELDPFCSNKLVDELFAFADPYCCGYKLVGA GGGGFALMLGKNLNSAKELRQALENSATFDVKVYNWNVAMTP</aaseq>

Gene Sequence

<dnaseqindica>4208..4606#3285..3979#2103..3122#1794..1920#781..1148#431..710#24..353#gaggagcaaaagtcgctcgatcgatggagccggccgagcgtcaccggcggcggcggcggagggcgcacacggcggacgaggcggcggcggtgctgcggaaggcgtggtgccggctgcggctatcggcgcgggatccgtcgcgggtgccgccgtgggacgccgtcgtcctcaccgcggccagccccgagcaggccgcgctctacgaccgccagcttgcgcgcgcccgccgcctcggccgcttcccggcctccaccgccgccctcgccgtccccgaccccgacgccgcgcgcatcggctccggcgccgccactctccacgccgtcgcctccctcgtccgccatctcatcgcccaggtccagccacttctgccctatgtactactactacagaatcgatcccctcccctgtttaacatcatctgaatctgcaggcttccaaggaagagatcgccgaattgctgcccgaagcaagtgattcttcagcagatgacatcccactcagctcggtggtacgattcatggcgaacaaacacgtactgctgcttcacgctgggggtgatagcaagagggttccatgggcgaaccccatggggaaggccttcctgcctctgccttacttggccggagacaatcctgatggacctgttccgctgcttttcgaccacattctcgcgatctcatccagcgcaaggcaagctttcaaaaaccaaggttgtagcttatagacagagccactgattttgagcaatatgttcaattttaattggtacagtatgatcaggtgggatcttcataatgaccggggatgttctcccatgcttcgatgcttcaaacctagttcttcctgatgatgctgcttgcatcgtcaccgtgccaacaactctagatgtggctgctaatcatggtgtagttgtagcggcaaaggacggaactgatggggagaactattccctgtgtttggttgataatctcctccagaagcctacagtgcacgagcttgtggagggccaggctattcgagatgacgggagagcactgcttgacacagggataatatcagccaggggtaaagcatggcaggagcttgttagacttgcatattcatctagccatgtcatgatcaaggagctcataactggcagaaaagaggtgagcaaatatttcctaacacactgtccaatttttcacaacaggctctctcatttactgcagacttgcttcatcgaatcaaggctatgtgattattctgaaaatgcatgtgttgcatttgtagtagttggagatatcggtctactaatgagcaacttcccttaaaagacataatcactcattacttcagtttgggagttataaataaatttgctataattcttgcagtgctggatgctcttctagctgtacaatacaatattctatcatcctgaattttacgaaagttagatgctgtctgtctctgtttcgctctttgctttgatatgctagaagcaacagtagtctgcttttccatcctaaagagaggcattggcattgttaggctgctttatgttttattttatattgagaccagattttcctaaccttttttctttgtcatgataaagctctgaatattccaaacctcattaatctcatctttatggaattttttttgttagaccagaaattcaaagtgacgtcctaaactcattttcttttgctccattgcttccattagttacgtttatcatttatctaactgtagatttgatataatatatttcatttcgtgggttcatattacccgatctattgcagatgagcttatacgaagatcttgttgctgcatgggtgccttccaggcatgaatggttaaggacccgtccatttggcatggaactaattgctgctttgggaaagcacaggatgttcagcttttgttcatgtatgttctctttagaattcattatgtagcagttgcaagtaaattatgctgattctctttctggtatggctgtgcattaaattctcctgtatttgacaaacagttcacatgttatatttctgattagttttgtgtgatattatgccttttgcaaagctaagttgtgaccattttcttttcagatgatttctcatttttacattttggcacatccgctgaagttcttgatcacttggcgggctcatattcaggacttgtagggcgaaggcacatgtcttcgataccagagactactgcttgtgatattgcggcaacagctgtcattttgtccagtaaaatttctgctggggtctcagttggagaggattcattggtctatgattcatcactttcaggtagaattaggattggctcacaatgtattgttgttggggtgaatatacatgagttacatgggaacaggtctcagataatcagtactagctcatacttcacattacctgatcgacattgcctctgggaagtccctttggtaaactctgtggaaagagtaatggtttactgtggccttcatgataatccaaaagtatctatgaagaaagatgggacattctgtggcaaaccatggagaaatgtcttggaacatcttaaaatccaggatacagatctgtggagctcaaccaatgaagacaactgcttatggaatgcaaagctttttccagtcatgtctctacctgaaacgctgaaagtaggtatgtggcttatgggatcgacatgtgacctggatggcaaagtcgcttccctgtggaaagaatcacggaggatcagcttagaagagctgcatcgttcgattgactaccatcagctctgtgtgaattcaagcaagcatcaagcagatctagcaaccaacattgctaaagcttgcatgacctatggcttgcttgggcgcaacctgtttcaactatgtgaggaaatgctacaaaaggaaaattcatgcgtagaagtctgtaatgagttactttcgctttgtcccagtcatggggatcagtattctggtgttcttccgcagagcagaagataccaggtcaaaatggatctgcttacagcttctggagatctttccactgcagctattgttgaagataaagtgtgggcttccatagcaagtgaaactgcatcagctataaaatatggatctaaaggtacagtctgtacactaccaacaaacttaatgctattttttctgtcgcttttctcaaaatgcagttatgtcttccaggcaacgagctaaatgtggttcattttaccattatcaatattgatgtttatatcaatctagttaacacatatgtatgattttgtagagccatcaagcgattccaagtgttcaagtaatggtaacctgcatcctaagaaggctattgtggaattaccggtccgtgtcgactttgtcgggggttggagtgatacacctccatggagtttggagcgtccaggttgtgttttgaatatggcaatacggttggaagggaaccttccagttggtgctatgatagagacaacaatggaccaccttggagttctcattgaagatgatgctggcagaaatgtttgtattgatgacctgtcttctattacttcaccattcaaagaaaatgattcattccgtttagtcaagtctgctcttattgtgactggtgtcctaaaccatgaaagattgtcaaaattagggttgaacattaggacatgggcaaatgttcctcgtggaagtggtctgggaacttctagcatattagcagctgcggtagttaaggggctattccaacttatagaaggtgatgaaagtgatgcaactgttgctagagctgtgctggtagtagagcaagtaatgggcacaggcggtggatggcaagatcaaattggtggcctatatcctggaatcaagtgcactcagagttttccaggacagccattgcgtttgcatgttgttccattgctggcatctccgcagttgattcaagaattacaacaacgtctcctggttgtgttcactggtcaagtaagtatgaattttctgctgtaagcatatataacatagtagataaactgaaattagggctagaagtttcaatttacaaacagtagcctgttcaagttccaccatgattctaagatttgtacgtccaaacaagattccttccaagtgtgcacgcccatccattttccacattgattttgcttcaaaagagtataattttctccccaaatgaatgtatactctgcacaggtaaggcttgcccaccgggtcctgcagaaagttgtcactcgatatctccgccgtgatagcctgttgatatctagcatcaagaggcttgctgagttggcgaaaattggaagggaagccctgatgaatggtgaaatagacgagcttggtggcataatgtcggaggcctggaggctgcatcaggagctagatcctttttgcagcaacaagcttgtggacgaattgtttgcatttgctgacccttactgctgcggctacaagcttgttggagctggtgggggcggctttgcgttgatgcttggaaagaatcttaactctgccaaagaactcagacaagcactcgagaattctgccaccttcgatgtaaaggtgtacaactggaacgttgctatgacaccatgaacaagtatagaactcgcggagcatatgttttcttacttttccttctggtaaacagaagttgcatatactgctggagcctggcgtcattgtacatttgtaccgtccggttcatttattcagatatgaagtgcattatttcaacaatctaattgttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0115100, RefSeq:Os03g0115100