Os03g0116400

From RiceWiki
Revision as of 12:16, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0116400| Description = Similar to Membrane protein| Version = NM_001055294.1 GI:115450316 GeneID:4331402| Length = 2535 bp| Definition = O...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0116400

Description

Similar to Membrane protein

Version

NM_001055294.1 GI:115450316 GeneID:4331402

Length

2535 bp

Definition

Oryza sativa Japonica Group Os03g0116400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:910588..913122

Sequence Coding Region

910689..910972,911306..911469,911581..911744,911860..912113,912724..912835

Expression

GEO Profiles:Os03g0116400

Genome Context

<gbrowseImage1> name=NC_008396:910588..913122 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:910588..913122 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacgtcgcacgcggacgtggagaagggggcgaggaggaaggaggtggggaaggtgccgtcgccgctgtacccgcagcacgagggggagagggagtgggtgccgtggatcgtcccgtcgttcctcgtcgccaacatcgtcgtcttcgtcctcaccatgtacgccaacaactgccccctccacaccccgcctcgcagcggcaagtgcatcgcccgcttcctcggccgcttctccttccagcctctccacgagaacccgctcctcggcccctcctccgccacgctacagaagatgggagcacttgtgtgggacaaggtcgtgcacgagcaccagggctatcgcctcatcacctccatctggctgcatgccggtgttctgcacctggtcgccaacatgctcagcctcatcttcatcggcctgcgccttgagcagcagttcggatacgtacgaattggagcgatctacctcctgtctggcctgggcggcagcgtcctgtcctctctgttcatcagaaaccacatctcggttggtgcttcaggtgctctctttggactcctcggagccatgctctcggagcttctcaccaactggaccatttacaccaacaaggtcgcggccgtgatcaccctcctgttcgtgatcgcggtgaacctggcgctcggcatcctcccacacgtgaataacttcgcgcacatcggcgggttcctgacgggtttcctgctcggattcgtgctgctgatgcggccgcatttcggctggatggagcgctacagcctcccctccggcagcccgtgcagctccaagaagtacctcgtctaccagtggatcctgcttgccatcgccactgccctcgtcattgtcggattcgcggttggtatgaccatgctcttccgcggggagaacgccaacgacagctgccactggtgtcactacctcagctgtgtaccaacctccagatggacctgctcgaactga</cdnaseq>

Protein Sequence

<aaseq>MATSHADVEKGARRKEVGKVPSPLYPQHEGEREWVPWIVPSFLV ANIVVFVLTMYANNCPLHTPPRSGKCIARFLGRFSFQPLHENPLLGPSSATLQKMGAL VWDKVVHEHQGYRLITSIWLHAGVLHLVANMLSLIFIGLRLEQQFGYVRIGAIYLLSG LGGSVLSSLFIRNHISVGASGALFGLLGAMLSELLTNWTIYTNKVAAVITLLFVIAVN LALGILPHVNNFAHIGGFLTGFLLGFVLLMRPHFGWMERYSLPSGSPCSSKKYLVYQW ILLAIATALVIVGFAVGMTMLFRGENANDSCHWCHYLSCVPTSRWTCSN</aaseq>

Gene Sequence

<dnaseqindica>102..385#719..882#994..1157#1273..1526#2137..2248#gtccaccgcctcactccatccaccgcaccaccaccactaccctgcacctcgatcaattgaacgcgagcaaggaaagagagagagcgagaaagagagcggcaatggcgacgtcgcacgcggacgtggagaagggggcgaggaggaaggaggtggggaaggtgccgtcgccgctgtacccgcagcacgagggggagagggagtgggtgccgtggatcgtcccgtcgttcctcgtcgccaacatcgtcgtcttcgtcctcaccatgtacgccaacaactgccccctccacaccccgcctcgcagcggcaagtgcatcgcccgcttcctcggccgcttctccttccagcctctccacgagaacccgctcctcggcccctcctccgccacgtaagtatatcaatcattgcatcgatctcctgtacccatttcttgacgaatttgttcgatcgatcgtcaattaacttcgtatatattcagacctcaatatgattcgaaaactaattcaacttgcattggactaccagtaggccaccacacttgaatcatatgtacagagtggggcgaactgattaaagatggatatggattggtctgtccatttctggacgaactaataatttggcataggggatgcatgcatgcatggggttgttgatgcttgatgatgagatggggcctgagtgcctgacacaatgtacttgctccatcatgttcttgcaggctacagaagatgggagcacttgtgtgggacaaggtcgtgcacgagcaccagggctatcgcctcatcacctccatctggctgcatgccggtgttctgcacctggtcgccaacatgctcagcctcatcttcatcggcctgcgccttgagcagcagttcggatacggtaacaactcacaactgatactatttccatctctctcattttaatcaagtatgctagtattcgattgcaacacaaagatctgaattggtgtttctttcgctgacgttgcagtacgaattggagcgatctacctcctgtctggcctgggcggcagcgtcctgtcctctctgttcatcagaaaccacatctcggttggtgcttcaggtgctctctttggactcctcggagccatgctctcggagcttctcaccaactggaccatttacaccaacaaggtacatacatgcacgcttaatctgagccatctgcaatatccagtaacaattcttgcaaaatccaggcgtctcacatggcagcgaattgaattaattggtaccgaatctgctgcaggtcgcggccgtgatcaccctcctgttcgtgatcgcggtgaacctggcgctcggcatcctcccacacgtgaataacttcgcgcacatcggcgggttcctgacgggtttcctgctcggattcgtgctgctgatgcggccgcatttcggctggatggagcgctacagcctcccctccggcagcccgtgcagctccaagaagtacctcgtctaccagtggatcctgcttgccatcgccactgccctcgtcattgtcgggtaagaatttcagaccatttaattttcagtttaagccgccacaattcaccaagatcacgacacgcgtatttcactgtaggagatagcaccagaattcttagtattattcattatatgaaaggaagaaaaataaaggatacagtagattggtatgtgcgttcttgagtgcgccacatgcatggatagattttgacgcgccaactaagtggtgaggctgatctgggcttgttcttgcaccccagattcctagagtggcatttgaaatgacagcatccagagcagcacaacgcaaaggcacaaaccgcacaacacctcaacttgctattttcttatgcacagaaaaaatattcctagatcattattgtagtgctaagctggcccctttcgtcgtccatattccaatataataacgtgctcgatttgccctttttctcctccagcgtagtagctaacatgcacctagataacagccacgctgtataccatttgctatagttgtcgcaaccactacgctgactaagttgttgagtttctgtcggtgaatttggcaaagtggcaagcaggccgaactcattctttccgtgctctgttcgtgttgaaccttttgcagattcgcggttggtatgaccatgctcttccgcggggagaacgccaacgacagctgccactggtgtcactacctcagctgtgtaccaacctccagatggacctgctcgaactgagaaatacaaggaggccatgaacaaattttctctgtactttttttctttttgcgtaatcctgtatgatgctgcaaacacatattctgtttatctgtagatagattaaagaaggattcttgatcgatcgatctcatactgtaggcaggctcgtcggggtcttccactcttcctatctcttgtacaattgattcattctttgtattgcaattattgaggcttggaatctcttctgtccctgcatcacttcttccaaattaaaacatatctttgaacctgtatggacaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0116400, RefSeq:Os03g0116400